Strain Fitness in Escherichia coli BW25113 around b2343
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,457,876 | + | yfcY | b2342 | 0.53 | +0.5 |
2,458,221 | - | yfcY | b2342 | 0.79 | +0.0 |
2,458,233 | - | yfcY | b2342 | 0.80 | +1.3 |
2,458,233 | - | yfcY | b2342 | 0.80 | +0.9 |
2,458,296 | + | yfcY | b2342 | 0.85 | -0.1 |
2,458,452 | + | -0.7 | |||
2,458,470 | - | +0.5 | |||
2,458,496 | - | -0.5 | |||
2,458,654 | + | +0.3 | |||
2,458,859 | - | b2343 | b2343 | 0.66 | -1.3 |
2,458,859 | - | b2343 | b2343 | 0.66 | -0.1 |
2,459,436 | + | -0.3 | |||
2,459,503 | - | fadL | b2344 | 0.13 | +0.3 |
2,459,653 | + | fadL | b2344 | 0.24 | +0.3 |
2,459,729 | - | fadL | b2344 | 0.30 | +0.6 |
2,459,751 | + | fadL | b2344 | 0.32 | -0.5 |
2,459,855 | - | fadL | b2344 | 0.39 | -0.2 |
2,459,935 | + | fadL | b2344 | 0.45 | +0.8 |
2,459,935 | + | fadL | b2344 | 0.45 | +0.1 |
Or see this region's nucleotide sequence