Strain Fitness in Escherichia coli BW25113 around b1735
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,815,661 | + | chbF | b1734 | 0.36 | -1.2 |
1,815,671 | + | chbF | b1734 | 0.37 | -0.4 |
1,815,671 | + | chbF | b1734 | 0.37 | +0.7 |
1,815,691 | + | chbF | b1734 | 0.38 | +2.3 |
1,815,726 | + | chbF | b1734 | 0.41 | -0.9 |
1,815,750 | + | chbF | b1734 | 0.43 | -0.3 |
1,815,753 | - | chbF | b1734 | 0.43 | -0.3 |
1,815,758 | - | chbF | b1734 | 0.43 | -0.3 |
1,815,758 | - | chbF | b1734 | 0.43 | +0.7 |
1,815,781 | + | chbF | b1734 | 0.45 | +0.7 |
1,815,794 | + | chbF | b1734 | 0.46 | +2.7 |
1,815,830 | + | chbF | b1734 | 0.49 | +0.7 |
1,815,841 | - | chbF | b1734 | 0.49 | -1.3 |
1,815,841 | - | chbF | b1734 | 0.49 | +0.3 |
1,815,846 | - | chbF | b1734 | 0.50 | +0.2 |
1,815,847 | + | chbF | b1734 | 0.50 | +0.7 |
1,815,847 | + | chbF | b1734 | 0.50 | -0.3 |
1,815,860 | - | chbF | b1734 | 0.51 | -1.3 |
1,815,899 | + | chbF | b1734 | 0.54 | +1.7 |
1,816,050 | - | chbF | b1734 | 0.65 | +1.1 |
1,816,050 | - | chbF | b1734 | 0.65 | -1.1 |
1,816,226 | - | chbF | b1734 | 0.78 | +0.7 |
1,816,271 | - | chbF | b1734 | 0.81 | -0.9 |
1,816,286 | - | chbF | b1734 | 0.82 | -0.3 |
1,816,286 | - | chbF | b1734 | 0.82 | +0.7 |
1,816,303 | + | chbF | b1734 | 0.84 | -0.9 |
1,816,954 | - | chbR | b1735 | 0.39 | -0.3 |
1,816,977 | - | chbR | b1735 | 0.41 | +0.7 |
1,816,977 | - | chbR | b1735 | 0.41 | -0.6 |
1,816,982 | - | chbR | b1735 | 0.42 | +1.3 |
1,816,982 | - | chbR | b1735 | 0.42 | -1.2 |
1,817,004 | - | chbR | b1735 | 0.44 | -1.2 |
1,817,053 | - | chbR | b1735 | 0.50 | +2.0 |
1,817,053 | - | chbR | b1735 | 0.50 | +1.7 |
1,817,156 | + | chbR | b1735 | 0.63 | +0.7 |
1,817,217 | - | chbR | b1735 | 0.70 | +0.7 |
1,817,217 | - | chbR | b1735 | 0.70 | -0.8 |
1,817,278 | - | chbR | b1735 | 0.77 | +0.7 |
1,817,298 | - | chbR | b1735 | 0.79 | -0.3 |
1,817,363 | - | chbR | b1735 | 0.87 | -0.8 |
1,817,387 | - | +1.5 | |||
1,817,387 | - | -0.5 | |||
1,817,431 | - | +0.4 | |||
1,817,431 | - | -1.1 | |||
1,817,431 | - | -0.4 | |||
1,817,469 | - | -1.3 | |||
1,817,471 | - | +0.8 | |||
1,817,483 | - | -0.1 | |||
1,817,483 | - | -0.1 | |||
1,817,485 | - | +0.3 | |||
1,817,485 | - | -0.2 | |||
1,817,486 | - | +0.2 | |||
1,817,557 | - | chbA | b1736 | 0.22 | +1.7 |
1,817,848 | - | +0.1 | |||
1,817,858 | + | +0.5 | |||
1,817,952 | - | -0.0 | |||
1,817,967 | - | -0.7 | |||
1,818,012 | - | +0.1 | |||
1,818,076 | + | chbC | b1737 | 0.14 | +0.7 |
1,818,082 | - | chbC | b1737 | 0.15 | +0.1 |
1,818,082 | - | chbC | b1737 | 0.15 | -0.1 |
1,818,202 | - | chbC | b1737 | 0.24 | -0.0 |
1,818,202 | - | chbC | b1737 | 0.24 | -0.2 |
1,818,332 | + | chbC | b1737 | 0.33 | +0.4 |
1,818,332 | + | chbC | b1737 | 0.33 | +0.9 |
1,818,421 | - | chbC | b1737 | 0.40 | -0.3 |
1,818,470 | - | chbC | b1737 | 0.43 | +0.1 |
Or see this region's nucleotide sequence