Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS20015 and HER17_RS20020 are separated by 4 nucleotides HER17_RS20020 and HER17_RS20025 are separated by 7 nucleotides HER17_RS20025 and HER17_RS20030 are separated by 414 nucleotides
HER17_RS20015: HER17_RS20015 - outer membrane lipid asymmetry maintenance protein MlaD, at 4,494,852 to 4,495,418
_RS20015
HER17_RS20020: HER17_RS20020 - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 4,495,423 to 4,496,205
_RS20020
HER17_RS20025: HER17_RS20025 - phospholipid ABC transporter ATP-binding protein MlaF, at 4,496,213 to 4,497,025
_RS20025
HER17_RS20030: HER17_RS20030 - calcium/sodium antiporter, at 4,497,440 to 4,498,405
_RS20030
Position (kb) 4496
4497
4498 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4495.300 kb on + strand, within HER17_RS20015 at 4495.300 kb on + strand, within HER17_RS20015 at 4495.379 kb on + strand at 4495.379 kb on + strand at 4495.380 kb on - strand at 4495.380 kb on - strand at 4495.582 kb on + strand, within HER17_RS20020 at 4495.582 kb on + strand, within HER17_RS20020 at 4495.582 kb on + strand, within HER17_RS20020 at 4495.587 kb on + strand, within HER17_RS20020 at 4495.962 kb on + strand, within HER17_RS20020 at 4495.964 kb on + strand, within HER17_RS20020 at 4495.964 kb on + strand, within HER17_RS20020 at 4495.964 kb on + strand, within HER17_RS20020 at 4495.964 kb on + strand, within HER17_RS20020 at 4495.964 kb on + strand, within HER17_RS20020 at 4495.965 kb on - strand, within HER17_RS20020 at 4495.982 kb on + strand, within HER17_RS20020 at 4495.990 kb on + strand, within HER17_RS20020 at 4495.991 kb on - strand, within HER17_RS20020 at 4496.060 kb on + strand, within HER17_RS20020 at 4496.061 kb on - strand, within HER17_RS20020 at 4496.121 kb on + strand, within HER17_RS20020 at 4496.200 kb on + strand at 4496.200 kb on + strand at 4496.200 kb on + strand at 4496.201 kb on - strand at 4496.201 kb on - strand at 4496.229 kb on - strand at 4496.229 kb on - strand at 4496.242 kb on + strand at 4496.242 kb on + strand at 4496.242 kb on + strand at 4496.243 kb on - strand at 4496.243 kb on - strand at 4496.243 kb on - strand at 4496.243 kb on - strand at 4496.244 kb on + strand at 4496.287 kb on + strand at 4496.320 kb on + strand, within HER17_RS20025 at 4496.320 kb on + strand, within HER17_RS20025 at 4496.320 kb on + strand, within HER17_RS20025 at 4496.320 kb on + strand, within HER17_RS20025 at 4496.321 kb on - strand, within HER17_RS20025 at 4496.321 kb on - strand, within HER17_RS20025 at 4496.321 kb on - strand, within HER17_RS20025 at 4496.377 kb on + strand, within HER17_RS20025 at 4496.377 kb on + strand, within HER17_RS20025 at 4496.378 kb on - strand, within HER17_RS20025 at 4496.378 kb on - strand, within HER17_RS20025 at 4496.378 kb on - strand, within HER17_RS20025 at 4496.378 kb on - strand, within HER17_RS20025 at 4496.379 kb on + strand, within HER17_RS20025 at 4496.379 kb on + strand, within HER17_RS20025 at 4496.379 kb on + strand, within HER17_RS20025 at 4496.379 kb on + strand, within HER17_RS20025 at 4496.379 kb on + strand, within HER17_RS20025 at 4496.379 kb on + strand, within HER17_RS20025 at 4496.380 kb on - strand, within HER17_RS20025 at 4496.380 kb on - strand, within HER17_RS20025 at 4496.380 kb on - strand, within HER17_RS20025 at 4496.380 kb on - strand, within HER17_RS20025 at 4496.380 kb on - strand, within HER17_RS20025 at 4496.411 kb on + strand, within HER17_RS20025 at 4496.411 kb on + strand, within HER17_RS20025 at 4496.412 kb on - strand, within HER17_RS20025 at 4496.412 kb on - strand, within HER17_RS20025 at 4496.412 kb on - strand, within HER17_RS20025 at 4496.412 kb on - strand, within HER17_RS20025 at 4496.527 kb on + strand, within HER17_RS20025 at 4496.528 kb on - strand, within HER17_RS20025 at 4496.528 kb on - strand, within HER17_RS20025 at 4496.528 kb on - strand, within HER17_RS20025 at 4496.528 kb on - strand, within HER17_RS20025 at 4496.624 kb on + strand, within HER17_RS20025 at 4496.624 kb on + strand, within HER17_RS20025 at 4496.625 kb on - strand, within HER17_RS20025 at 4496.659 kb on + strand, within HER17_RS20025 at 4496.686 kb on + strand, within HER17_RS20025 at 4496.687 kb on - strand, within HER17_RS20025 at 4496.687 kb on - strand, within HER17_RS20025 at 4496.713 kb on + strand, within HER17_RS20025 at 4496.713 kb on + strand, within HER17_RS20025 at 4496.785 kb on - strand, within HER17_RS20025 at 4496.983 kb on + strand at 4496.984 kb on - strand at 4497.007 kb on + strand at 4497.007 kb on + strand at 4497.007 kb on + strand at 4497.008 kb on - strand at 4497.008 kb on - strand at 4497.008 kb on - strand at 4497.008 kb on - strand at 4497.026 kb on + strand at 4497.027 kb on - strand at 4497.027 kb on - strand at 4497.049 kb on + strand at 4497.049 kb on + strand at 4497.049 kb on + strand at 4497.050 kb on - strand at 4497.057 kb on + strand at 4497.058 kb on - strand at 4497.058 kb on - strand at 4497.058 kb on - strand at 4497.126 kb on + strand at 4497.169 kb on + strand at 4497.174 kb on - strand at 4497.216 kb on - strand at 4497.270 kb on + strand at 4497.271 kb on - strand at 4497.271 kb on - strand at 4497.292 kb on + strand at 4497.293 kb on - strand at 4497.294 kb on + strand at 4497.294 kb on + strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.295 kb on - strand at 4497.299 kb on + strand at 4497.303 kb on + strand at 4497.350 kb on + strand at 4497.350 kb on + strand at 4497.350 kb on + strand at 4497.350 kb on + strand at 4497.351 kb on - strand at 4497.359 kb on - strand at 4497.359 kb on - strand at 4497.359 kb on - strand at 4497.359 kb on - strand at 4497.379 kb on + strand at 4497.382 kb on - strand at 4497.382 kb on - strand at 4497.406 kb on + strand at 4497.406 kb on + strand at 4497.407 kb on - strand at 4497.415 kb on + strand at 4497.415 kb on + strand at 4497.415 kb on + strand at 4497.415 kb on + strand at 4497.416 kb on - strand at 4497.416 kb on - strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.417 kb on + strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.418 kb on - strand at 4497.419 kb on + strand at 4497.419 kb on + strand at 4497.419 kb on + strand at 4497.419 kb on + strand at 4497.420 kb on - strand at 4497.420 kb on - strand at 4497.420 kb on - strand at 4497.420 kb on - strand at 4497.420 kb on - strand at 4497.424 kb on + strand at 4497.424 kb on + strand at 4497.428 kb on - strand at 4497.428 kb on - strand at 4497.456 kb on + strand at 4497.456 kb on + strand at 4497.456 kb on + strand at 4497.457 kb on - strand at 4497.457 kb on - strand at 4497.457 kb on - strand at 4497.457 kb on - strand at 4497.480 kb on + strand at 4497.488 kb on + strand at 4497.509 kb on + strand at 4497.510 kb on - strand at 4497.543 kb on + strand, within HER17_RS20030 at 4497.670 kb on + strand, within HER17_RS20030 at 4497.680 kb on - strand, within HER17_RS20030 at 4497.727 kb on - strand, within HER17_RS20030 at 4497.777 kb on + strand, within HER17_RS20030 at 4497.777 kb on + strand, within HER17_RS20030 at 4497.777 kb on + strand, within HER17_RS20030 at 4497.777 kb on + strand, within HER17_RS20030 at 4497.778 kb on - strand, within HER17_RS20030 at 4497.778 kb on - strand, within HER17_RS20030 at 4497.778 kb on - strand, within HER17_RS20030 at 4497.793 kb on - strand, within HER17_RS20030 at 4497.802 kb on + strand, within HER17_RS20030 at 4497.802 kb on + strand, within HER17_RS20030 at 4497.802 kb on + strand, within HER17_RS20030 at 4497.802 kb on + strand, within HER17_RS20030 at 4497.802 kb on + strand, within HER17_RS20030 at 4497.802 kb on + strand, within HER17_RS20030 at 4497.803 kb on - strand, within HER17_RS20030 at 4497.803 kb on - strand, within HER17_RS20030 at 4497.803 kb on - strand, within HER17_RS20030 at 4497.803 kb on - strand, within HER17_RS20030 at 4497.803 kb on - strand, within HER17_RS20030 at 4497.803 kb on - strand, within HER17_RS20030 at 4497.806 kb on + strand, within HER17_RS20030 at 4497.806 kb on + strand, within HER17_RS20030 at 4497.806 kb on + strand, within HER17_RS20030 at 4497.807 kb on - strand, within HER17_RS20030 at 4497.807 kb on - strand, within HER17_RS20030 at 4497.807 kb on - strand, within HER17_RS20030 at 4497.807 kb on - strand, within HER17_RS20030 at 4497.807 kb on - strand, within HER17_RS20030 at 4497.828 kb on + strand, within HER17_RS20030 at 4497.828 kb on + strand, within HER17_RS20030 at 4497.828 kb on + strand, within HER17_RS20030 at 4497.828 kb on + strand, within HER17_RS20030 at 4497.829 kb on - strand, within HER17_RS20030 at 4497.829 kb on - strand, within HER17_RS20030 at 4497.867 kb on + strand, within HER17_RS20030 at 4497.867 kb on + strand, within HER17_RS20030 at 4497.868 kb on - strand, within HER17_RS20030 at 4497.868 kb on - strand, within HER17_RS20030 at 4497.868 kb on - strand, within HER17_RS20030 at 4497.868 kb on - strand, within HER17_RS20030 at 4497.928 kb on - strand, within HER17_RS20030 at 4497.952 kb on + strand, within HER17_RS20030 at 4497.994 kb on + strand, within HER17_RS20030 at 4497.995 kb on - strand, within HER17_RS20030 at 4498.015 kb on + strand, within HER17_RS20030 at 4498.016 kb on - strand, within HER17_RS20030
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,495,300 + HER17_RS20015 0.79 -1.0 4,495,300 + HER17_RS20015 0.79 +0.2 4,495,379 + -0.1 4,495,379 + +0.4 4,495,380 - -0.0 4,495,380 - -0.5 4,495,582 + HER17_RS20020 0.20 +0.1 4,495,582 + HER17_RS20020 0.20 +2.3 4,495,582 + HER17_RS20020 0.20 +0.5 4,495,587 + HER17_RS20020 0.21 -0.8 4,495,962 + HER17_RS20020 0.69 +0.3 4,495,964 + HER17_RS20020 0.69 -0.4 4,495,964 + HER17_RS20020 0.69 -0.5 4,495,964 + HER17_RS20020 0.69 +0.4 4,495,964 + HER17_RS20020 0.69 -1.1 4,495,964 + HER17_RS20020 0.69 -0.2 4,495,965 - HER17_RS20020 0.69 +0.1 4,495,982 + HER17_RS20020 0.71 -0.5 4,495,990 + HER17_RS20020 0.72 -0.2 4,495,991 - HER17_RS20020 0.73 -0.8 4,496,060 + HER17_RS20020 0.81 +0.3 4,496,061 - HER17_RS20020 0.81 +0.2 4,496,121 + HER17_RS20020 0.89 +0.3 4,496,200 + -0.1 4,496,200 + +0.3 4,496,200 + -0.2 4,496,201 - +0.2 4,496,201 - +0.2 4,496,229 - +0.6 4,496,229 - -0.6 4,496,242 + -0.6 4,496,242 + +0.3 4,496,242 + -0.1 4,496,243 - +0.5 4,496,243 - +0.3 4,496,243 - -0.1 4,496,243 - +0.9 4,496,244 + +0.4 4,496,287 + +0.8 4,496,320 + HER17_RS20025 0.13 -0.7 4,496,320 + HER17_RS20025 0.13 -0.5 4,496,320 + HER17_RS20025 0.13 +1.8 4,496,320 + HER17_RS20025 0.13 +0.2 4,496,321 - HER17_RS20025 0.13 -0.7 4,496,321 - HER17_RS20025 0.13 +0.3 4,496,321 - HER17_RS20025 0.13 +2.0 4,496,377 + HER17_RS20025 0.20 -0.2 4,496,377 + HER17_RS20025 0.20 +0.6 4,496,378 - HER17_RS20025 0.20 -0.4 4,496,378 - HER17_RS20025 0.20 -0.6 4,496,378 - HER17_RS20025 0.20 -1.5 4,496,378 - HER17_RS20025 0.20 -0.3 4,496,379 + HER17_RS20025 0.20 -0.5 4,496,379 + HER17_RS20025 0.20 +0.1 4,496,379 + HER17_RS20025 0.20 +0.1 4,496,379 + HER17_RS20025 0.20 -0.6 4,496,379 + HER17_RS20025 0.20 -0.1 4,496,379 + HER17_RS20025 0.20 +0.1 4,496,380 - HER17_RS20025 0.21 -1.0 4,496,380 - HER17_RS20025 0.21 +0.2 4,496,380 - HER17_RS20025 0.21 -1.6 4,496,380 - HER17_RS20025 0.21 -0.9 4,496,380 - HER17_RS20025 0.21 -0.3 4,496,411 + HER17_RS20025 0.24 +0.1 4,496,411 + HER17_RS20025 0.24 +0.2 4,496,412 - HER17_RS20025 0.24 -0.8 4,496,412 - HER17_RS20025 0.24 -0.4 4,496,412 - HER17_RS20025 0.24 -0.3 4,496,412 - HER17_RS20025 0.24 -0.3 4,496,527 + HER17_RS20025 0.39 +0.0 4,496,528 - HER17_RS20025 0.39 -0.6 4,496,528 - HER17_RS20025 0.39 +0.5 4,496,528 - HER17_RS20025 0.39 +0.5 4,496,528 - HER17_RS20025 0.39 +0.9 4,496,624 + HER17_RS20025 0.51 -0.2 4,496,624 + HER17_RS20025 0.51 +0.4 4,496,625 - HER17_RS20025 0.51 +0.3 4,496,659 + HER17_RS20025 0.55 +0.3 4,496,686 + HER17_RS20025 0.58 -0.4 4,496,687 - HER17_RS20025 0.58 -0.7 4,496,687 - HER17_RS20025 0.58 +0.5 4,496,713 + HER17_RS20025 0.62 -1.6 4,496,713 + HER17_RS20025 0.62 +0.3 4,496,785 - HER17_RS20025 0.70 -0.8 4,496,983 + -0.0 4,496,984 - -0.2 4,497,007 + -0.2 4,497,007 + -0.1 4,497,007 + -0.3 4,497,008 - -1.5 4,497,008 - -1.4 4,497,008 - +0.5 4,497,008 - +1.0 4,497,026 + +1.0 4,497,027 - +0.2 4,497,027 - +0.3 4,497,049 + +0.1 4,497,049 + -2.0 4,497,049 + +1.2 4,497,050 - +0.1 4,497,057 + -0.6 4,497,058 - +0.2 4,497,058 - -0.2 4,497,058 - -0.8 4,497,126 + +0.1 4,497,169 + -0.3 4,497,174 - +0.6 4,497,216 - +0.4 4,497,270 + +0.3 4,497,271 - -0.2 4,497,271 - +1.4 4,497,292 + -0.2 4,497,293 - -0.2 4,497,294 + +0.3 4,497,294 + +1.0 4,497,295 - -0.8 4,497,295 - -0.4 4,497,295 - +0.5 4,497,295 - -0.3 4,497,295 - +0.2 4,497,295 - -0.5 4,497,295 - +0.1 4,497,295 - +0.2 4,497,299 + -0.0 4,497,303 + -0.1 4,497,350 + -0.5 4,497,350 + +0.5 4,497,350 + +0.1 4,497,350 + -0.1 4,497,351 - +1.3 4,497,359 - +0.2 4,497,359 - +0.2 4,497,359 - +0.7 4,497,359 - +0.1 4,497,379 + -0.9 4,497,382 - +0.2 4,497,382 - +0.2 4,497,406 + +0.8 4,497,406 + +0.3 4,497,407 - -0.9 4,497,415 + +0.5 4,497,415 + +0.1 4,497,415 + +0.7 4,497,415 + +0.0 4,497,416 - +1.8 4,497,416 - -0.6 4,497,417 + +0.7 4,497,417 + -0.6 4,497,417 + +0.6 4,497,417 + -0.2 4,497,417 + -0.6 4,497,417 + -0.1 4,497,417 + -0.3 4,497,417 + +0.2 4,497,417 + -0.4 4,497,417 + +0.3 4,497,417 + +0.9 4,497,418 - -0.5 4,497,418 - +0.6 4,497,418 - +1.0 4,497,418 - -0.7 4,497,418 - -2.2 4,497,418 - -1.1 4,497,418 - -0.1 4,497,418 - -0.9 4,497,418 - +0.5 4,497,418 - -0.6 4,497,418 - +0.0 4,497,418 - -0.2 4,497,419 + +0.3 4,497,419 + +0.4 4,497,419 + -0.3 4,497,419 + +0.9 4,497,420 - -0.5 4,497,420 - -0.3 4,497,420 - +0.7 4,497,420 - -0.1 4,497,420 - -0.2 4,497,424 + -0.3 4,497,424 + -0.2 4,497,428 - +0.7 4,497,428 - +0.9 4,497,456 + +0.5 4,497,456 + -0.0 4,497,456 + +0.4 4,497,457 - -0.9 4,497,457 - -0.2 4,497,457 - +0.4 4,497,457 - +0.8 4,497,480 + +0.4 4,497,488 + +0.5 4,497,509 + +0.0 4,497,510 - -0.4 4,497,543 + HER17_RS20030 0.11 +1.0 4,497,670 + HER17_RS20030 0.24 +0.7 4,497,680 - HER17_RS20030 0.25 +0.0 4,497,727 - HER17_RS20030 0.30 +0.4 4,497,777 + HER17_RS20030 0.35 -0.1 4,497,777 + HER17_RS20030 0.35 +0.2 4,497,777 + HER17_RS20030 0.35 -0.4 4,497,777 + HER17_RS20030 0.35 +0.4 4,497,778 - HER17_RS20030 0.35 +0.3 4,497,778 - HER17_RS20030 0.35 +0.5 4,497,778 - HER17_RS20030 0.35 +0.0 4,497,793 - HER17_RS20030 0.37 +0.4 4,497,802 + HER17_RS20030 0.37 +0.1 4,497,802 + HER17_RS20030 0.37 +0.2 4,497,802 + HER17_RS20030 0.37 +0.6 4,497,802 + HER17_RS20030 0.37 -1.5 4,497,802 + HER17_RS20030 0.37 -1.3 4,497,802 + HER17_RS20030 0.37 +0.7 4,497,803 - HER17_RS20030 0.38 -2.0 4,497,803 - HER17_RS20030 0.38 +0.2 4,497,803 - HER17_RS20030 0.38 -0.8 4,497,803 - HER17_RS20030 0.38 +1.1 4,497,803 - HER17_RS20030 0.38 -1.5 4,497,803 - HER17_RS20030 0.38 +0.1 4,497,806 + HER17_RS20030 0.38 +1.4 4,497,806 + HER17_RS20030 0.38 +0.9 4,497,806 + HER17_RS20030 0.38 +0.5 4,497,807 - HER17_RS20030 0.38 -0.6 4,497,807 - HER17_RS20030 0.38 -1.4 4,497,807 - HER17_RS20030 0.38 -0.4 4,497,807 - HER17_RS20030 0.38 +0.3 4,497,807 - HER17_RS20030 0.38 -0.1 4,497,828 + HER17_RS20030 0.40 -0.0 4,497,828 + HER17_RS20030 0.40 -1.5 4,497,828 + HER17_RS20030 0.40 -0.2 4,497,828 + HER17_RS20030 0.40 -0.4 4,497,829 - HER17_RS20030 0.40 +0.0 4,497,829 - HER17_RS20030 0.40 +0.2 4,497,867 + HER17_RS20030 0.44 +0.5 4,497,867 + HER17_RS20030 0.44 -0.9 4,497,868 - HER17_RS20030 0.44 -1.1 4,497,868 - HER17_RS20030 0.44 +0.3 4,497,868 - HER17_RS20030 0.44 -0.2 4,497,868 - HER17_RS20030 0.44 +0.9 4,497,928 - HER17_RS20030 0.51 -0.7 4,497,952 + HER17_RS20030 0.53 -0.3 4,497,994 + HER17_RS20030 0.57 +1.5 4,497,995 - HER17_RS20030 0.57 -1.0 4,498,015 + HER17_RS20030 0.60 -0.4 4,498,016 - HER17_RS20030 0.60 +0.2
Or see this region's nucleotide sequence