Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS07575 and HER17_RS07580 are separated by 3 nucleotides HER17_RS07580 and HER17_RS07585 are separated by 104 nucleotides HER17_RS07585 and HER17_RS07590 are separated by 197 nucleotides
HER17_RS07575: HER17_RS07575 - DNA-binding protein, at 1,684,225 to 1,685,853
_RS07575
HER17_RS07580: HER17_RS07580 - hypothetical protein, at 1,685,857 to 1,686,255
_RS07580
HER17_RS07585: HER17_RS07585 - hypothetical protein, at 1,686,360 to 1,686,770
_RS07585
HER17_RS07590: HER17_RS07590 - hypothetical protein, at 1,686,968 to 1,687,765
_RS07590
Position (kb) 1685
1686
1687 Strain fitness (log2 ratio) -2
-1
0
1 at 1685.021 kb on + strand, within HER17_RS07575 at 1685.222 kb on + strand, within HER17_RS07575 at 1685.222 kb on + strand, within HER17_RS07575 at 1685.601 kb on - strand, within HER17_RS07575 at 1685.673 kb on + strand, within HER17_RS07575 at 1685.674 kb on - strand, within HER17_RS07575 at 1685.683 kb on + strand, within HER17_RS07575 at 1685.897 kb on + strand, within HER17_RS07580 at 1686.377 kb on - strand at 1686.492 kb on + strand, within HER17_RS07585 at 1686.502 kb on - strand, within HER17_RS07585 at 1686.573 kb on + strand, within HER17_RS07585 at 1686.641 kb on + strand, within HER17_RS07585 at 1686.708 kb on + strand, within HER17_RS07585 at 1686.778 kb on + strand at 1686.781 kb on + strand at 1686.786 kb on - strand at 1686.786 kb on - strand at 1686.819 kb on - strand at 1686.931 kb on - strand at 1687.005 kb on - strand at 1687.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 1,685,021 + HER17_RS07575 0.49 +0.2 1,685,222 + HER17_RS07575 0.61 +0.1 1,685,222 + HER17_RS07575 0.61 -0.7 1,685,601 - HER17_RS07575 0.84 -1.8 1,685,673 + HER17_RS07575 0.89 -2.2 1,685,674 - HER17_RS07575 0.89 +0.1 1,685,683 + HER17_RS07575 0.90 +0.6 1,685,897 + HER17_RS07580 0.10 +0.3 1,686,377 - -0.3 1,686,492 + HER17_RS07585 0.32 -0.3 1,686,502 - HER17_RS07585 0.35 +0.8 1,686,573 + HER17_RS07585 0.52 -0.1 1,686,641 + HER17_RS07585 0.68 +0.0 1,686,708 + HER17_RS07585 0.85 -1.0 1,686,778 + -0.4 1,686,781 + -1.2 1,686,786 - -0.1 1,686,786 - -0.3 1,686,819 - +0.2 1,686,931 - -0.0 1,687,005 - +0.9 1,687,040 - +0.0
Or see this region's nucleotide sequence