Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS21695 and HER17_RS21700 are separated by 44 nucleotides HER17_RS21700 and HER17_RS21705 are separated by 90 nucleotides HER17_RS21705 and HER17_RS21710 are separated by 165 nucleotides HER17_RS21710 and HER17_RS21715 are separated by 189 nucleotides
HER17_RS21695: HER17_RS21695 - phosphate signaling complex protein PhoU, at 4,863,341 to 4,864,069
_RS21695
HER17_RS21700: HER17_RS21700 - XRE family transcriptional regulator, at 4,864,114 to 4,864,680
_RS21700
HER17_RS21705: HER17_RS21705 - benzoate/H(+) symporter BenE family transporter, at 4,864,771 to 4,865,955
_RS21705
HER17_RS21710: HER17_RS21710 - VOC family protein, at 4,866,121 to 4,866,510
_RS21710
HER17_RS21715: HER17_RS21715 - hypothetical protein, at 4,866,700 to 4,867,359
_RS21715
Position (kb) 4864
4865
4866 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4864.054 kb on + strand at 4864.131 kb on - strand at 4864.278 kb on + strand, within HER17_RS21700 at 4864.278 kb on + strand, within HER17_RS21700 at 4864.278 kb on + strand, within HER17_RS21700 at 4864.278 kb on + strand, within HER17_RS21700 at 4864.279 kb on - strand, within HER17_RS21700 at 4864.279 kb on - strand, within HER17_RS21700 at 4864.279 kb on - strand, within HER17_RS21700 at 4864.279 kb on - strand, within HER17_RS21700 at 4864.279 kb on - strand, within HER17_RS21700 at 4864.281 kb on + strand, within HER17_RS21700 at 4864.281 kb on + strand, within HER17_RS21700 at 4864.281 kb on + strand, within HER17_RS21700 at 4864.281 kb on + strand, within HER17_RS21700 at 4864.281 kb on + strand, within HER17_RS21700 at 4864.281 kb on + strand, within HER17_RS21700 at 4864.282 kb on - strand, within HER17_RS21700 at 4864.282 kb on - strand, within HER17_RS21700 at 4864.345 kb on - strand, within HER17_RS21700 at 4864.353 kb on + strand, within HER17_RS21700 at 4864.353 kb on + strand, within HER17_RS21700 at 4864.354 kb on - strand, within HER17_RS21700 at 4864.446 kb on - strand, within HER17_RS21700 at 4864.446 kb on - strand, within HER17_RS21700 at 4864.479 kb on + strand, within HER17_RS21700 at 4864.480 kb on - strand, within HER17_RS21700 at 4864.485 kb on + strand, within HER17_RS21700 at 4864.647 kb on + strand at 4864.647 kb on + strand at 4864.647 kb on + strand at 4864.648 kb on - strand at 4864.648 kb on - strand at 4864.648 kb on - strand at 4864.648 kb on - strand at 4864.666 kb on + strand at 4864.719 kb on + strand at 4864.719 kb on + strand at 4864.720 kb on - strand at 4864.720 kb on - strand at 4864.720 kb on - strand at 4864.743 kb on + strand at 4864.766 kb on - strand at 4864.766 kb on - strand at 4864.766 kb on - strand at 4864.767 kb on + strand at 4864.768 kb on - strand at 4864.847 kb on - strand at 4864.923 kb on - strand, within HER17_RS21705 at 4864.956 kb on + strand, within HER17_RS21705 at 4864.960 kb on - strand, within HER17_RS21705 at 4864.960 kb on - strand, within HER17_RS21705 at 4864.975 kb on + strand, within HER17_RS21705 at 4865.024 kb on + strand, within HER17_RS21705 at 4865.024 kb on + strand, within HER17_RS21705 at 4865.025 kb on - strand, within HER17_RS21705 at 4865.151 kb on + strand, within HER17_RS21705 at 4865.321 kb on + strand, within HER17_RS21705 at 4865.327 kb on + strand, within HER17_RS21705 at 4865.327 kb on + strand, within HER17_RS21705 at 4865.328 kb on - strand, within HER17_RS21705 at 4865.385 kb on + strand, within HER17_RS21705 at 4865.581 kb on - strand, within HER17_RS21705 at 4865.621 kb on + strand, within HER17_RS21705 at 4865.621 kb on + strand, within HER17_RS21705 at 4865.622 kb on - strand, within HER17_RS21705 at 4865.645 kb on - strand, within HER17_RS21705 at 4865.674 kb on + strand, within HER17_RS21705 at 4865.792 kb on - strand, within HER17_RS21705 at 4865.843 kb on + strand at 4865.843 kb on + strand at 4865.843 kb on + strand at 4865.843 kb on + strand at 4865.844 kb on - strand at 4865.844 kb on - strand at 4865.844 kb on - strand at 4865.844 kb on - strand at 4865.935 kb on + strand at 4865.935 kb on + strand at 4865.957 kb on + strand at 4865.970 kb on + strand at 4865.994 kb on + strand at 4865.995 kb on - strand at 4865.995 kb on - strand at 4866.021 kb on - strand at 4866.021 kb on - strand at 4866.021 kb on - strand at 4866.045 kb on + strand at 4866.045 kb on + strand at 4866.063 kb on + strand at 4866.064 kb on - strand at 4866.068 kb on + strand at 4866.068 kb on + strand at 4866.068 kb on + strand at 4866.069 kb on - strand at 4866.091 kb on + strand at 4866.101 kb on + strand at 4866.102 kb on - strand at 4866.103 kb on + strand at 4866.103 kb on + strand at 4866.107 kb on - strand at 4866.107 kb on - strand at 4866.107 kb on - strand at 4866.144 kb on - strand at 4866.144 kb on - strand at 4866.156 kb on + strand at 4866.157 kb on - strand at 4866.157 kb on - strand at 4866.157 kb on - strand at 4866.157 kb on - strand at 4866.157 kb on - strand at 4866.184 kb on + strand, within HER17_RS21710 at 4866.189 kb on + strand, within HER17_RS21710 at 4866.189 kb on + strand, within HER17_RS21710 at 4866.190 kb on - strand, within HER17_RS21710 at 4866.190 kb on - strand, within HER17_RS21710 at 4866.249 kb on + strand, within HER17_RS21710 at 4866.249 kb on + strand, within HER17_RS21710 at 4866.249 kb on + strand, within HER17_RS21710 at 4866.249 kb on + strand, within HER17_RS21710 at 4866.249 kb on + strand, within HER17_RS21710 at 4866.250 kb on - strand, within HER17_RS21710 at 4866.250 kb on - strand, within HER17_RS21710 at 4866.250 kb on - strand, within HER17_RS21710 at 4866.250 kb on - strand, within HER17_RS21710 at 4866.262 kb on - strand, within HER17_RS21710 at 4866.289 kb on - strand, within HER17_RS21710 at 4866.339 kb on - strand, within HER17_RS21710 at 4866.350 kb on - strand, within HER17_RS21710 at 4866.369 kb on - strand, within HER17_RS21710 at 4866.476 kb on - strand at 4866.476 kb on - strand at 4866.509 kb on - strand at 4866.525 kb on + strand at 4866.527 kb on + strand at 4866.527 kb on + strand at 4866.527 kb on + strand at 4866.528 kb on - strand at 4866.533 kb on + strand at 4866.533 kb on + strand at 4866.533 kb on + strand at 4866.538 kb on + strand at 4866.538 kb on + strand at 4866.539 kb on - strand at 4866.539 kb on - strand at 4866.539 kb on - strand at 4866.542 kb on + strand at 4866.542 kb on + strand at 4866.542 kb on + strand at 4866.542 kb on + strand at 4866.543 kb on - strand at 4866.543 kb on - strand at 4866.543 kb on - strand at 4866.543 kb on - strand at 4866.543 kb on - strand at 4866.549 kb on + strand at 4866.549 kb on + strand at 4866.549 kb on + strand at 4866.549 kb on + strand at 4866.549 kb on + strand at 4866.549 kb on + strand at 4866.550 kb on - strand at 4866.550 kb on - strand at 4866.550 kb on - strand at 4866.550 kb on - strand at 4866.550 kb on - strand at 4866.550 kb on - strand at 4866.551 kb on + strand at 4866.551 kb on + strand at 4866.551 kb on + strand at 4866.551 kb on + strand at 4866.552 kb on - strand at 4866.556 kb on + strand at 4866.557 kb on - strand at 4866.557 kb on - strand at 4866.570 kb on + strand at 4866.571 kb on - strand at 4866.597 kb on + strand at 4866.598 kb on - strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.599 kb on + strand at 4866.600 kb on - strand at 4866.600 kb on - strand at 4866.600 kb on - strand at 4866.617 kb on + strand at 4866.617 kb on + strand at 4866.617 kb on + strand at 4866.618 kb on - strand at 4866.618 kb on - strand at 4866.621 kb on + strand at 4866.621 kb on + strand at 4866.622 kb on - strand at 4866.622 kb on - strand at 4866.622 kb on - strand at 4866.622 kb on - strand at 4866.622 kb on - strand at 4866.649 kb on + strand at 4866.684 kb on - strand at 4866.684 kb on - strand at 4866.684 kb on - strand at 4866.685 kb on + strand at 4866.685 kb on + strand at 4866.686 kb on - strand at 4866.686 kb on - strand at 4866.716 kb on + strand at 4866.716 kb on + strand at 4866.743 kb on + strand at 4866.751 kb on + strand at 4866.760 kb on - strand at 4866.804 kb on - strand, within HER17_RS21715 at 4866.811 kb on + strand, within HER17_RS21715 at 4866.811 kb on + strand, within HER17_RS21715 at 4866.811 kb on + strand, within HER17_RS21715 at 4866.811 kb on + strand, within HER17_RS21715 at 4866.811 kb on + strand, within HER17_RS21715 at 4866.811 kb on + strand, within HER17_RS21715 at 4866.812 kb on - strand, within HER17_RS21715 at 4866.812 kb on - strand, within HER17_RS21715 at 4866.812 kb on - strand, within HER17_RS21715 at 4866.813 kb on + strand, within HER17_RS21715 at 4866.813 kb on + strand, within HER17_RS21715 at 4866.813 kb on + strand, within HER17_RS21715 at 4866.813 kb on + strand, within HER17_RS21715 at 4866.813 kb on + strand, within HER17_RS21715 at 4866.814 kb on - strand, within HER17_RS21715 at 4866.814 kb on - strand, within HER17_RS21715 at 4866.886 kb on - strand, within HER17_RS21715 at 4866.886 kb on - strand, within HER17_RS21715 at 4866.886 kb on - strand, within HER17_RS21715 at 4866.886 kb on - strand, within HER17_RS21715 at 4866.908 kb on + strand, within HER17_RS21715 at 4866.953 kb on + strand, within HER17_RS21715 at 4866.953 kb on + strand, within HER17_RS21715 at 4866.954 kb on - strand, within HER17_RS21715
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,864,054 + +0.6 4,864,131 - +0.4 4,864,278 + HER17_RS21700 0.29 +0.1 4,864,278 + HER17_RS21700 0.29 -0.7 4,864,278 + HER17_RS21700 0.29 +0.5 4,864,278 + HER17_RS21700 0.29 +1.7 4,864,279 - HER17_RS21700 0.29 +0.3 4,864,279 - HER17_RS21700 0.29 +0.2 4,864,279 - HER17_RS21700 0.29 -0.8 4,864,279 - HER17_RS21700 0.29 +0.8 4,864,279 - HER17_RS21700 0.29 -0.2 4,864,281 + HER17_RS21700 0.29 +0.1 4,864,281 + HER17_RS21700 0.29 -0.9 4,864,281 + HER17_RS21700 0.29 +0.9 4,864,281 + HER17_RS21700 0.29 -0.1 4,864,281 + HER17_RS21700 0.29 -0.6 4,864,281 + HER17_RS21700 0.29 -0.5 4,864,282 - HER17_RS21700 0.30 -0.3 4,864,282 - HER17_RS21700 0.30 -0.3 4,864,345 - HER17_RS21700 0.41 +0.4 4,864,353 + HER17_RS21700 0.42 +0.3 4,864,353 + HER17_RS21700 0.42 +0.4 4,864,354 - HER17_RS21700 0.42 +0.9 4,864,446 - HER17_RS21700 0.59 -0.2 4,864,446 - HER17_RS21700 0.59 +0.2 4,864,479 + HER17_RS21700 0.64 -0.6 4,864,480 - HER17_RS21700 0.65 +0.1 4,864,485 + HER17_RS21700 0.65 +0.1 4,864,647 + +0.1 4,864,647 + -0.4 4,864,647 + +0.6 4,864,648 - -1.9 4,864,648 - -0.8 4,864,648 - +0.8 4,864,648 - -0.2 4,864,666 + -0.1 4,864,719 + -0.5 4,864,719 + +0.2 4,864,720 - -0.1 4,864,720 - +0.3 4,864,720 - +0.4 4,864,743 + -0.3 4,864,766 - -0.1 4,864,766 - -1.1 4,864,766 - -0.3 4,864,767 + +0.4 4,864,768 - -0.8 4,864,847 - +0.3 4,864,923 - HER17_RS21705 0.13 +0.8 4,864,956 + HER17_RS21705 0.16 -1.1 4,864,960 - HER17_RS21705 0.16 -0.8 4,864,960 - HER17_RS21705 0.16 -0.4 4,864,975 + HER17_RS21705 0.17 +0.1 4,865,024 + HER17_RS21705 0.21 +0.5 4,865,024 + HER17_RS21705 0.21 +0.2 4,865,025 - HER17_RS21705 0.21 +1.0 4,865,151 + HER17_RS21705 0.32 +0.3 4,865,321 + HER17_RS21705 0.46 -1.3 4,865,327 + HER17_RS21705 0.47 -0.4 4,865,327 + HER17_RS21705 0.47 +0.1 4,865,328 - HER17_RS21705 0.47 +0.6 4,865,385 + HER17_RS21705 0.52 -1.5 4,865,581 - HER17_RS21705 0.68 -1.1 4,865,621 + HER17_RS21705 0.72 +0.5 4,865,621 + HER17_RS21705 0.72 +0.0 4,865,622 - HER17_RS21705 0.72 -0.6 4,865,645 - HER17_RS21705 0.74 -0.8 4,865,674 + HER17_RS21705 0.76 +0.9 4,865,792 - HER17_RS21705 0.86 +0.2 4,865,843 + +0.2 4,865,843 + +0.2 4,865,843 + +0.9 4,865,843 + +0.3 4,865,844 - +0.6 4,865,844 - +0.2 4,865,844 - +0.2 4,865,844 - -0.2 4,865,935 + -0.6 4,865,935 + -0.2 4,865,957 + +0.6 4,865,970 + -0.5 4,865,994 + -0.1 4,865,995 - -0.7 4,865,995 - -0.3 4,866,021 - -0.4 4,866,021 - -1.2 4,866,021 - -0.6 4,866,045 + -0.7 4,866,045 + -0.3 4,866,063 + -1.0 4,866,064 - -1.0 4,866,068 + -0.5 4,866,068 + -0.5 4,866,068 + -0.1 4,866,069 - +0.4 4,866,091 + -0.2 4,866,101 + +0.1 4,866,102 - +0.4 4,866,103 + -1.1 4,866,103 + -0.9 4,866,107 - +0.4 4,866,107 - +0.5 4,866,107 - +0.0 4,866,144 - +0.6 4,866,144 - +0.6 4,866,156 + -0.5 4,866,157 - -0.2 4,866,157 - -0.7 4,866,157 - +0.4 4,866,157 - +0.4 4,866,157 - +0.5 4,866,184 + HER17_RS21710 0.16 +0.3 4,866,189 + HER17_RS21710 0.17 +0.5 4,866,189 + HER17_RS21710 0.17 -0.5 4,866,190 - HER17_RS21710 0.18 -0.7 4,866,190 - HER17_RS21710 0.18 +0.3 4,866,249 + HER17_RS21710 0.33 +0.9 4,866,249 + HER17_RS21710 0.33 -0.9 4,866,249 + HER17_RS21710 0.33 -0.8 4,866,249 + HER17_RS21710 0.33 +0.2 4,866,249 + HER17_RS21710 0.33 +0.7 4,866,250 - HER17_RS21710 0.33 -1.1 4,866,250 - HER17_RS21710 0.33 +1.3 4,866,250 - HER17_RS21710 0.33 -1.0 4,866,250 - HER17_RS21710 0.33 -0.7 4,866,262 - HER17_RS21710 0.36 -0.2 4,866,289 - HER17_RS21710 0.43 +0.5 4,866,339 - HER17_RS21710 0.56 +0.1 4,866,350 - HER17_RS21710 0.59 +0.9 4,866,369 - HER17_RS21710 0.64 +0.0 4,866,476 - +0.4 4,866,476 - -0.3 4,866,509 - -0.2 4,866,525 + -0.4 4,866,527 + +2.1 4,866,527 + +0.1 4,866,527 + -0.2 4,866,528 - -0.1 4,866,533 + -0.1 4,866,533 + -0.7 4,866,533 + +0.1 4,866,538 + -0.2 4,866,538 + -0.4 4,866,539 - +0.1 4,866,539 - +1.5 4,866,539 - +0.9 4,866,542 + -1.0 4,866,542 + -0.1 4,866,542 + +0.4 4,866,542 + +0.5 4,866,543 - +1.8 4,866,543 - -0.6 4,866,543 - -0.2 4,866,543 - -1.3 4,866,543 - -0.5 4,866,549 + +0.2 4,866,549 + -0.7 4,866,549 + +0.1 4,866,549 + -0.1 4,866,549 + +0.6 4,866,549 + -3.6 4,866,550 - +1.1 4,866,550 - -0.6 4,866,550 - +0.8 4,866,550 - +0.3 4,866,550 - -0.8 4,866,550 - -0.7 4,866,551 + +1.0 4,866,551 + +0.0 4,866,551 + -1.3 4,866,551 + -1.2 4,866,552 - -0.1 4,866,556 + -0.7 4,866,557 - +0.5 4,866,557 - -0.1 4,866,570 + -0.1 4,866,571 - +0.2 4,866,597 + -0.1 4,866,598 - +0.6 4,866,599 + -0.8 4,866,599 + -0.0 4,866,599 + -0.2 4,866,599 + +0.1 4,866,599 + -0.4 4,866,599 + -0.5 4,866,599 + -0.5 4,866,599 + -0.2 4,866,600 - +0.5 4,866,600 - +0.7 4,866,600 - -0.6 4,866,617 + +0.6 4,866,617 + -0.5 4,866,617 + -0.0 4,866,618 - +0.0 4,866,618 - +0.1 4,866,621 + +0.0 4,866,621 + -0.4 4,866,622 - +0.1 4,866,622 - +1.1 4,866,622 - +2.0 4,866,622 - -0.7 4,866,622 - -1.3 4,866,649 + +0.7 4,866,684 - +0.0 4,866,684 - -0.7 4,866,684 - -0.6 4,866,685 + -1.6 4,866,685 + +0.3 4,866,686 - -0.8 4,866,686 - -0.5 4,866,716 + -0.0 4,866,716 + +0.2 4,866,743 + -0.6 4,866,751 + +0.3 4,866,760 - +0.7 4,866,804 - HER17_RS21715 0.16 -0.3 4,866,811 + HER17_RS21715 0.17 +1.5 4,866,811 + HER17_RS21715 0.17 -0.7 4,866,811 + HER17_RS21715 0.17 +0.9 4,866,811 + HER17_RS21715 0.17 +0.3 4,866,811 + HER17_RS21715 0.17 -0.7 4,866,811 + HER17_RS21715 0.17 -0.4 4,866,812 - HER17_RS21715 0.17 +0.2 4,866,812 - HER17_RS21715 0.17 -0.0 4,866,812 - HER17_RS21715 0.17 +1.9 4,866,813 + HER17_RS21715 0.17 +0.2 4,866,813 + HER17_RS21715 0.17 -0.4 4,866,813 + HER17_RS21715 0.17 +0.9 4,866,813 + HER17_RS21715 0.17 +0.4 4,866,813 + HER17_RS21715 0.17 -0.1 4,866,814 - HER17_RS21715 0.17 +0.1 4,866,814 - HER17_RS21715 0.17 -0.6 4,866,886 - HER17_RS21715 0.28 +0.0 4,866,886 - HER17_RS21715 0.28 -0.4 4,866,886 - HER17_RS21715 0.28 +0.4 4,866,886 - HER17_RS21715 0.28 +1.1 4,866,908 + HER17_RS21715 0.32 -0.6 4,866,953 + HER17_RS21715 0.38 -0.7 4,866,953 + HER17_RS21715 0.38 +1.1 4,866,954 - HER17_RS21715 0.38 +0.4
Or see this region's nucleotide sequence