Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13685

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,026,192	+		HER17_RS13680	0.38	-0.6
3,026,193	-		HER17_RS13680	0.38	+0.8
3,026,193	-		HER17_RS13680	0.38	-0.2
3,026,294	-		HER17_RS13680	0.48	-0.1
3,026,294	-		HER17_RS13680	0.48	-0.5
3,026,305	-		HER17_RS13680	0.49	-0.1
3,026,406	+		HER17_RS13680	0.59	+0.4
3,026,407	-		HER17_RS13680	0.59	-0.1
3,026,407	-		HER17_RS13680	0.59	-1.6
3,026,430	+		HER17_RS13680	0.61	-0.3
3,026,431	-		HER17_RS13680	0.61	+0.1
3,026,439	+		HER17_RS13680	0.62	-0.2
3,026,440	-		HER17_RS13680	0.62	-0.3
3,026,511	-		HER17_RS13680	0.69	+0.0
3,026,657	-		HER17_RS13680	0.84	+0.6
3,026,657	-		HER17_RS13680	0.84	-0.5
3,026,657	-		HER17_RS13680	0.84	+0.3
3,026,694	+		HER17_RS13680	0.87	-0.0
3,026,694	+		HER17_RS13680	0.87	-0.2
3,026,695	-		HER17_RS13680	0.87	+0.1
3,026,732	-				+0.0
3,026,734	+				+0.4
3,026,735	-				-1.0
3,026,773	+				+0.4
3,026,773	+				+0.5
3,026,773	+				-0.1
3,026,774	-				+0.3
3,026,780	-				-1.3
3,026,780	-				+0.2
3,026,780	-				+0.3
3,026,790	+				-0.6
3,026,791	-				-0.4
3,026,791	-				+0.0
3,026,861	+				-0.3
3,026,862	-				+0.0
3,026,862	-				+0.4
3,026,983	+				-0.3
3,027,033	-				-0.7
3,027,061	+				-0.9
3,027,065	+				+0.8
3,027,065	+				+0.8
3,027,093	+				+0.5
3,027,127	+				-0.0
3,027,127	+				+0.2
3,027,139	-				+0.7
3,027,204	+				+0.1
3,027,233	-				-0.6
3,027,264	+				+0.3
3,027,264	+				+0.1
3,027,264	+				-0.4
3,027,264	+				+0.3
3,027,265	-				+1.3
3,027,265	-				-1.6
3,027,265	-				+0.0
3,027,265	-				+1.6
3,027,265	-				+0.7
3,027,265	-				-0.3
3,027,268	+				-1.0
3,027,269	-				-0.9
3,027,269	-				-0.5
3,027,341	+		HER17_RS13685	0.17	+1.6
3,027,369	+		HER17_RS13685	0.20	-0.8
3,027,370	-		HER17_RS13685	0.20	-0.1
3,027,498	+		HER17_RS13685	0.33	-0.0
3,027,540	+		HER17_RS13685	0.37	-0.5
3,027,541	-		HER17_RS13685	0.37	+0.7
3,027,541	-		HER17_RS13685	0.37	+0.1
3,027,541	-		HER17_RS13685	0.37	-0.7
3,027,541	-		HER17_RS13685	0.37	-0.1
3,027,541	-		HER17_RS13685	0.37	+0.5
3,027,545	+		HER17_RS13685	0.37	-0.2
3,027,546	-		HER17_RS13685	0.37	-0.2
3,027,546	-		HER17_RS13685	0.37	-0.4
3,027,598	+		HER17_RS13685	0.43	+0.4
3,027,711	-		HER17_RS13685	0.54	-0.2
3,027,711	-		HER17_RS13685	0.54	+1.0
3,027,711	-		HER17_RS13685	0.54	+0.1
3,027,832	+		HER17_RS13685	0.66	+0.8
3,027,832	+		HER17_RS13685	0.66	-0.3
3,027,833	-		HER17_RS13685	0.66	+1.1
3,027,833	-		HER17_RS13685	0.66	-0.5
3,027,899	-		HER17_RS13685	0.73	-0.2
3,027,922	-		HER17_RS13685	0.75	+0.1
3,027,941	-		HER17_RS13685	0.77	+1.3
3,027,949	-		HER17_RS13685	0.78	-0.6
3,027,970	-		HER17_RS13685	0.80	+0.0
3,028,021	+		HER17_RS13685	0.85	+0.2
3,028,021	+		HER17_RS13685	0.85	+0.2
3,028,021	+		HER17_RS13685	0.85	-0.9
3,028,021	+		HER17_RS13685	0.85	-0.5
3,028,022	-		HER17_RS13685	0.85	+0.2
3,028,022	-		HER17_RS13685	0.85	+0.9
3,028,022	-		HER17_RS13685	0.85	+0.7
3,028,104	+				-0.6
3,028,122	+				+0.3
3,028,122	+				+0.1
3,028,123	-				+0.1
3,028,167	-				-1.6
3,028,212	+				-0.2
3,028,212	+				-2.3
3,028,212	+				+0.1
3,028,266	-				+0.7
3,028,266	-				+0.8
3,028,266	-				+2.3
3,028,266	-				+0.8
3,028,266	-				-0.8
3,028,270	+				-0.1
3,028,270	+				-0.4
3,028,329	+				+0.4
3,028,391	+		HER17_RS13690	0.17	+0.4
3,028,391	+		HER17_RS13690	0.17	+0.4
3,028,391	+		HER17_RS13690	0.17	-0.3
3,028,391	+		HER17_RS13690	0.17	+1.4
3,028,391	+		HER17_RS13690	0.17	+0.6
3,028,391	+		HER17_RS13690	0.17	-0.3
3,028,392	-		HER17_RS13690	0.17	-0.3
3,028,392	-		HER17_RS13690	0.17	-0.2
3,028,392	-		HER17_RS13690	0.17	+0.2
3,028,394	+		HER17_RS13690	0.17	-0.8
3,028,394	+		HER17_RS13690	0.17	+0.2
3,028,394	+		HER17_RS13690	0.17	+0.3
3,028,394	+		HER17_RS13690	0.17	-1.6
3,028,394	+		HER17_RS13690	0.17	+0.5
3,028,394	+		HER17_RS13690	0.17	+1.4
3,028,395	-		HER17_RS13690	0.17	+0.5
3,028,395	-		HER17_RS13690	0.17	-1.3
3,028,395	-		HER17_RS13690	0.17	+0.1
3,028,458	-		HER17_RS13690	0.27	-1.1
3,028,458	-		HER17_RS13690	0.27	-0.7
3,028,458	-		HER17_RS13690	0.27	-2.1
3,028,465	+		HER17_RS13690	0.28	-1.4
3,028,466	-		HER17_RS13690	0.28	+0.3
3,028,466	-		HER17_RS13690	0.28	+0.3
3,028,512	+		HER17_RS13690	0.35	+1.0
3,028,512	+		HER17_RS13690	0.35	+0.2
3,028,513	-		HER17_RS13690	0.35	-0.5
3,028,513	-		HER17_RS13690	0.35	+0.2
3,028,513	-		HER17_RS13690	0.35	+0.1
3,028,547	+		HER17_RS13690	0.40	+0.3
3,028,548	-		HER17_RS13690	0.40	+1.8
3,028,577	-		HER17_RS13690	0.44	+0.1
3,028,577	-		HER17_RS13690	0.44	+0.1
3,028,599	+		HER17_RS13690	0.47	+0.7
3,028,599	+		HER17_RS13690	0.47	-0.3
3,028,599	+		HER17_RS13690	0.47	+0.2
3,028,599	+		HER17_RS13690	0.47	+0.4
3,028,600	-		HER17_RS13690	0.47	-0.5
3,028,600	-		HER17_RS13690	0.47	+0.2
3,028,600	-		HER17_RS13690	0.47	-0.3
3,028,600	-		HER17_RS13690	0.47	+0.2
3,028,628	+		HER17_RS13690	0.52	+0.1
3,028,648	+		HER17_RS13690	0.55	-1.4
3,028,649	-		HER17_RS13690	0.55	+0.9
3,028,652	+		HER17_RS13690	0.55	-0.1
3,028,652	+		HER17_RS13690	0.55	-0.5
3,028,652	+		HER17_RS13690	0.55	-1.1
3,028,652	+		HER17_RS13690	0.55	-0.7
3,028,653	-		HER17_RS13690	0.55	+0.2
3,028,653	-		HER17_RS13690	0.55	-0.2
3,028,653	-		HER17_RS13690	0.55	+0.0
3,028,653	-		HER17_RS13690	0.55	+0.5
3,028,653	-		HER17_RS13690	0.55	+0.3
3,028,653	-		HER17_RS13690	0.55	+1.0
3,028,687	-		HER17_RS13690	0.60	-0.1
3,028,687	-		HER17_RS13690	0.60	-0.5
3,028,687	-		HER17_RS13690	0.60	+2.1
3,028,706	+		HER17_RS13690	0.63	-0.4
3,028,707	-		HER17_RS13690	0.63	+1.8
3,028,807	-		HER17_RS13690	0.78	-0.8
3,028,883	+		HER17_RS13690	0.89	-0.4
3,028,885	+		HER17_RS13690	0.90	+1.5
3,028,885	+		HER17_RS13690	0.90	+0.4
3,028,980	-				-0.1
3,028,993	+				+0.5
3,029,155	+				+0.0