Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS05915

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,312,741	-				-1.6
1,312,745	+				-3.3
1,312,746	-				-2.7
1,312,746	-				-3.0
1,312,746	-				-2.6
1,312,746	-				-3.0
1,312,748	-				-2.2
1,312,748	-				-3.4
1,312,748	-				-3.0
1,312,767	+				-3.3
1,312,810	+				-1.8
1,312,811	-				-0.5
1,312,888	+				-2.3
1,312,889	-				-3.6
1,312,936	+				-2.6
1,312,936	+				-1.9
1,312,937	-				-1.5
1,312,937	-				-2.2
1,312,972	+				-0.3
1,312,972	+				-0.3
1,312,972	+				+0.7
1,312,973	-				+0.8
1,313,010	-				+0.3
1,313,118	-				-0.3
1,313,134	-				+0.5
1,313,265	+				-0.2
1,313,265	+				+0.8
1,313,316	+				+0.0
1,313,339	+				+0.4
1,313,339	+				-0.1
1,313,373	+				-0.6
1,313,414	+				+0.6
1,313,453	-				-0.0
1,313,461	-				+0.1
1,313,583	+				+0.7
1,313,583	+				-0.7
1,313,583	+				+0.3
1,313,583	+				-0.5
1,313,583	+				+0.2
1,313,584	-				-1.1
1,313,584	-				-0.3
1,313,584	-				-0.5
1,313,584	-				-0.3
1,313,584	-				+0.5
1,313,584	-				-0.1
1,313,584	-				+1.1
1,313,584	-				+0.7
1,313,584	-				+1.2
1,313,584	-				+0.8
1,313,591	+				-1.2
1,313,591	+				+0.6
1,313,592	-				-0.1
1,313,592	-				+1.1
1,313,626	+				+0.1
1,313,627	-				-0.3
1,313,648	-				+1.9
1,313,648	-				-0.8
1,313,649	+				-0.3
1,313,661	-				-0.6
1,313,717	-				-0.2
1,313,743	+				-0.1
1,313,743	+				+0.5
1,313,743	+				+1.4
1,313,743	+				-0.1
1,313,744	-				-0.6
1,313,748	-				+0.4
1,313,748	-				+0.6
1,313,748	-				-0.0
1,313,790	+				+0.5
1,313,790	+				+0.3
1,313,909	+		HER17_RS05915	0.15	-0.1
1,313,910	-		HER17_RS05915	0.15	+1.0
1,313,910	-		HER17_RS05915	0.15	-0.1
1,313,922	+		HER17_RS05915	0.16	-0.2
1,313,959	-		HER17_RS05915	0.19	+0.5
1,313,979	+		HER17_RS05915	0.20	-0.9
1,313,980	-		HER17_RS05915	0.20	+0.2
1,314,011	-		HER17_RS05915	0.22	+3.1
1,314,027	+		HER17_RS05915	0.23	+0.5
1,314,041	-		HER17_RS05915	0.24	+0.2
1,314,041	-		HER17_RS05915	0.24	+0.6
1,314,081	-		HER17_RS05915	0.27	-0.9
1,314,149	-		HER17_RS05915	0.32	-0.2
1,314,155	-		HER17_RS05915	0.32	+0.0
1,314,200	+		HER17_RS05915	0.35	+0.2
1,314,268	+		HER17_RS05915	0.40	-1.5
1,314,268	+		HER17_RS05915	0.40	-0.1
1,314,269	-		HER17_RS05915	0.40	+0.4
1,314,269	-		HER17_RS05915	0.40	-0.6
1,314,269	-		HER17_RS05915	0.40	+0.3
1,314,269	-		HER17_RS05915	0.40	-1.2
1,314,269	-		HER17_RS05915	0.40	-0.1
1,314,269	-		HER17_RS05915	0.40	-0.6
1,314,269	-		HER17_RS05915	0.40	-2.1
1,314,407	+		HER17_RS05915	0.50	+0.1
1,314,408	-		HER17_RS05915	0.50	-0.6
1,314,408	-		HER17_RS05915	0.50	-0.9
1,314,408	-		HER17_RS05915	0.50	+0.4
1,314,408	-		HER17_RS05915	0.50	+0.2
1,314,467	+		HER17_RS05915	0.54	-0.3
1,314,576	-		HER17_RS05915	0.62	-0.1
1,314,584	+		HER17_RS05915	0.62	+0.1
1,314,585	-		HER17_RS05915	0.62	-0.4
1,314,587	+		HER17_RS05915	0.62	-1.3
1,314,630	+		HER17_RS05915	0.65	+0.2
1,314,630	+		HER17_RS05915	0.65	-0.7
1,314,630	+		HER17_RS05915	0.65	+1.2
1,314,631	-		HER17_RS05915	0.65	-0.5
1,314,631	-		HER17_RS05915	0.65	-0.2
1,314,633	-		HER17_RS05915	0.66	+0.5
1,314,743	+		HER17_RS05915	0.73	+1.1
1,314,809	+		HER17_RS05915	0.78	-0.4
1,314,817	-		HER17_RS05915	0.78	+1.1
1,314,834	+		HER17_RS05915	0.80	+0.4
1,314,835	-		HER17_RS05915	0.80	+0.4
1,314,914	+		HER17_RS05915	0.85	-0.6
1,314,914	+		HER17_RS05915	0.85	+0.7
1,314,914	+		HER17_RS05915	0.85	+0.2
1,314,915	-		HER17_RS05915	0.85	-0.1
1,314,915	-		HER17_RS05915	0.85	-0.3
1,314,915	-		HER17_RS05915	0.85	-0.5
1,314,920	+		HER17_RS05915	0.86	-0.2
1,314,960	+		HER17_RS05915	0.88	+1.1
1,314,960	+		HER17_RS05915	0.88	+1.0
1,314,961	-		HER17_RS05915	0.88	-0.7
1,315,017	-				-0.9
1,315,017	-				+1.1
1,315,056	-				-0.3
1,315,060	+				-0.5
1,315,074	+				+0.6
1,315,075	-				+0.0
1,315,109	-				+0.6
1,315,109	-				-0.1
1,315,126	-				-0.0
1,315,140	+				+0.7
1,315,141	-				+0.2
1,315,141	-				+0.6
1,315,144	+				-0.1
1,315,145	-				+0.3
1,315,187	-				+0.6
1,315,244	+		HER17_RS05920	0.12	-1.4
1,315,245	-		HER17_RS05920	0.12	-0.3
1,315,245	-		HER17_RS05920	0.12	+0.2
1,315,248	-		HER17_RS05920	0.12	+0.0
1,315,248	-		HER17_RS05920	0.12	-1.2
1,315,289	+		HER17_RS05920	0.17	-0.0
1,315,290	-		HER17_RS05920	0.17	-0.5
1,315,290	-		HER17_RS05920	0.17	+0.9
1,315,351	+		HER17_RS05920	0.24	+0.1
1,315,351	+		HER17_RS05920	0.24	+1.2
1,315,351	+		HER17_RS05920	0.24	+0.0
1,315,352	-		HER17_RS05920	0.24	+0.1
1,315,383	+		HER17_RS05920	0.28	+1.5
1,315,463	+		HER17_RS05920	0.37	+0.6
1,315,464	-		HER17_RS05920	0.37	-0.4
1,315,482	-		HER17_RS05920	0.39	-0.1
1,315,512	-		HER17_RS05920	0.43	+0.1
1,315,512	-		HER17_RS05920	0.43	-0.2
1,315,512	-		HER17_RS05920	0.43	+0.4
1,315,514	+		HER17_RS05920	0.43	+0.8
1,315,555	+		HER17_RS05920	0.48	+0.3
1,315,556	-		HER17_RS05920	0.48	+0.3
1,315,556	-		HER17_RS05920	0.48	-0.2
1,315,654	-		HER17_RS05920	0.60	-0.1
1,315,655	+		HER17_RS05920	0.60	+0.1
1,315,656	-		HER17_RS05920	0.60	+0.3
1,315,656	-		HER17_RS05920	0.60	-0.2
1,315,687	+		HER17_RS05920	0.63	+0.7
1,315,687	+		HER17_RS05920	0.63	-0.4
1,315,688	-		HER17_RS05920	0.64	+0.1
1,315,790	+		HER17_RS05920	0.76	+0.3
1,315,838	+		HER17_RS05920	0.81	-0.6
1,315,928	+				-1.4
1,315,928	+				-0.0
1,315,928	+				-0.1
1,315,929	-				-0.1
1,315,929	-				+0.8
1,315,929	-				+0.7
1,315,929	-				-1.2
1,315,929	-				+0.8
1,315,929	-				+0.5
1,315,932	+				+0.0
1,315,932	+				-0.1
1,315,932	+				+0.6
1,315,932	+				-1.9
1,315,932	+				-0.2
1,315,933	-				+0.1
1,315,933	-				+0.5
1,315,933	-				-1.7
1,315,933	-				+0.2
1,315,933	-				+0.1
1,315,933	-				-0.3
1,315,933	-				+0.1
1,315,934	+				+1.0
1,315,955	+				+0.5
1,315,956	-				+0.9
1,315,956	-				-0.4
1,316,019	+				-0.5
1,316,087	-				+0.5