Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS02325 and HER17_RS02330 are separated by 306 nucleotides HER17_RS02330 and HER17_RS02335 are separated by 352 nucleotides
HER17_RS02325: HER17_RS02325 - DASS family sodium-coupled anion symporter, at 520,821 to 522,275
_RS02325
HER17_RS02330: HER17_RS02330 - Na/Pi cotransporter family protein, at 522,582 to 524,228
_RS02330
HER17_RS02335: HER17_RS02335 - lysine-sensitive aspartokinase 3, at 524,581 to 525,957
_RS02335
Position (kb) 522
523
524
525 Strain fitness (log2 ratio) -2
-1
0
1 at 521.617 kb on - strand, within HER17_RS02325 at 521.662 kb on + strand, within HER17_RS02325 at 521.663 kb on - strand, within HER17_RS02325 at 521.672 kb on + strand, within HER17_RS02325 at 521.673 kb on - strand, within HER17_RS02325 at 521.735 kb on + strand, within HER17_RS02325 at 521.735 kb on + strand, within HER17_RS02325 at 521.735 kb on + strand, within HER17_RS02325 at 521.801 kb on + strand, within HER17_RS02325 at 521.872 kb on + strand, within HER17_RS02325 at 521.873 kb on - strand, within HER17_RS02325 at 521.873 kb on - strand, within HER17_RS02325 at 521.917 kb on - strand, within HER17_RS02325 at 521.935 kb on - strand, within HER17_RS02325 at 522.044 kb on + strand, within HER17_RS02325 at 522.044 kb on + strand, within HER17_RS02325 at 522.058 kb on + strand, within HER17_RS02325 at 522.058 kb on + strand, within HER17_RS02325 at 522.059 kb on - strand, within HER17_RS02325 at 522.059 kb on - strand, within HER17_RS02325 at 522.059 kb on - strand, within HER17_RS02325 at 522.081 kb on - strand, within HER17_RS02325 at 522.087 kb on - strand, within HER17_RS02325 at 522.090 kb on - strand, within HER17_RS02325 at 522.125 kb on + strand, within HER17_RS02325 at 522.125 kb on + strand, within HER17_RS02325 at 522.126 kb on - strand, within HER17_RS02325 at 522.177 kb on + strand at 522.178 kb on - strand at 522.228 kb on - strand at 522.256 kb on + strand at 522.257 kb on - strand at 522.257 kb on - strand at 522.315 kb on + strand at 522.316 kb on - strand at 522.316 kb on - strand at 522.316 kb on - strand at 522.317 kb on + strand at 522.325 kb on - strand at 522.331 kb on + strand at 522.331 kb on + strand at 522.333 kb on + strand at 522.350 kb on + strand at 522.351 kb on - strand at 522.351 kb on - strand at 522.390 kb on + strand at 522.416 kb on + strand at 522.417 kb on - strand at 522.417 kb on - strand at 522.509 kb on + strand at 522.525 kb on + strand at 522.543 kb on + strand at 522.544 kb on - strand at 522.563 kb on - strand at 522.563 kb on - strand at 522.563 kb on - strand at 522.563 kb on - strand at 522.667 kb on - strand at 522.725 kb on + strand at 522.836 kb on + strand, within HER17_RS02330 at 522.837 kb on - strand, within HER17_RS02330 at 522.931 kb on + strand, within HER17_RS02330 at 523.066 kb on + strand, within HER17_RS02330 at 523.066 kb on + strand, within HER17_RS02330 at 523.133 kb on + strand, within HER17_RS02330 at 523.133 kb on + strand, within HER17_RS02330 at 523.133 kb on + strand, within HER17_RS02330 at 523.134 kb on - strand, within HER17_RS02330 at 523.134 kb on - strand, within HER17_RS02330 at 523.137 kb on + strand, within HER17_RS02330 at 523.137 kb on + strand, within HER17_RS02330 at 523.138 kb on - strand, within HER17_RS02330 at 523.138 kb on - strand, within HER17_RS02330 at 523.138 kb on - strand, within HER17_RS02330 at 523.246 kb on + strand, within HER17_RS02330 at 523.247 kb on - strand, within HER17_RS02330 at 523.324 kb on + strand, within HER17_RS02330 at 523.325 kb on - strand, within HER17_RS02330 at 523.410 kb on + strand, within HER17_RS02330 at 523.411 kb on - strand, within HER17_RS02330 at 523.425 kb on + strand, within HER17_RS02330 at 523.426 kb on - strand, within HER17_RS02330 at 523.426 kb on - strand, within HER17_RS02330 at 523.652 kb on - strand, within HER17_RS02330 at 523.665 kb on - strand, within HER17_RS02330 at 523.713 kb on + strand, within HER17_RS02330 at 523.713 kb on + strand, within HER17_RS02330 at 523.714 kb on - strand, within HER17_RS02330 at 523.724 kb on + strand, within HER17_RS02330 at 523.724 kb on + strand, within HER17_RS02330 at 523.832 kb on + strand, within HER17_RS02330 at 523.832 kb on + strand, within HER17_RS02330 at 523.833 kb on - strand, within HER17_RS02330 at 523.833 kb on - strand, within HER17_RS02330 at 523.834 kb on + strand, within HER17_RS02330 at 523.834 kb on + strand, within HER17_RS02330 at 523.834 kb on + strand, within HER17_RS02330 at 523.834 kb on + strand, within HER17_RS02330 at 523.834 kb on + strand, within HER17_RS02330 at 523.835 kb on - strand, within HER17_RS02330 at 523.835 kb on - strand, within HER17_RS02330 at 523.835 kb on - strand, within HER17_RS02330 at 523.835 kb on - strand, within HER17_RS02330 at 523.835 kb on - strand, within HER17_RS02330 at 523.835 kb on - strand, within HER17_RS02330 at 523.876 kb on + strand, within HER17_RS02330 at 523.876 kb on + strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.877 kb on - strand, within HER17_RS02330 at 523.880 kb on + strand, within HER17_RS02330 at 523.880 kb on + strand, within HER17_RS02330 at 523.880 kb on + strand, within HER17_RS02330 at 523.880 kb on + strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 523.881 kb on - strand, within HER17_RS02330 at 524.065 kb on + strand at 524.065 kb on + strand at 524.065 kb on + strand at 524.065 kb on + strand at 524.065 kb on + strand at 524.065 kb on + strand at 524.066 kb on - strand at 524.066 kb on - strand at 524.066 kb on - strand at 524.080 kb on + strand at 524.081 kb on - strand at 524.081 kb on - strand at 524.081 kb on - strand at 524.081 kb on - strand at 524.081 kb on - strand at 524.163 kb on + strand at 524.163 kb on + strand at 524.163 kb on + strand at 524.257 kb on + strand at 524.258 kb on - strand at 524.299 kb on + strand at 524.300 kb on - strand at 524.300 kb on - strand at 524.300 kb on - strand at 524.300 kb on - strand at 524.300 kb on - strand at 524.300 kb on - strand at 524.414 kb on - strand at 524.545 kb on + strand at 524.545 kb on + strand at 524.545 kb on + strand at 524.545 kb on + strand at 524.546 kb on - strand at 524.556 kb on - strand at 524.563 kb on + strand at 524.563 kb on + strand at 524.564 kb on - strand at 524.688 kb on + strand at 524.688 kb on + strand at 524.689 kb on - strand at 524.713 kb on + strand at 524.714 kb on - strand at 524.714 kb on - strand at 524.809 kb on + strand, within HER17_RS02335 at 524.809 kb on + strand, within HER17_RS02335 at 524.810 kb on - strand, within HER17_RS02335 at 524.810 kb on - strand, within HER17_RS02335 at 524.990 kb on + strand, within HER17_RS02335 at 524.990 kb on + strand, within HER17_RS02335 at 524.990 kb on + strand, within HER17_RS02335 at 524.990 kb on + strand, within HER17_RS02335 at 524.990 kb on + strand, within HER17_RS02335 at 524.990 kb on + strand, within HER17_RS02335 at 524.991 kb on - strand, within HER17_RS02335 at 524.991 kb on - strand, within HER17_RS02335 at 524.991 kb on - strand, within HER17_RS02335 at 524.997 kb on + strand, within HER17_RS02335 at 524.998 kb on - strand, within HER17_RS02335 at 524.998 kb on - strand, within HER17_RS02335 at 524.998 kb on - strand, within HER17_RS02335 at 524.998 kb on - strand, within HER17_RS02335 at 525.057 kb on + strand, within HER17_RS02335 at 525.201 kb on + strand, within HER17_RS02335 at 525.202 kb on - strand, within HER17_RS02335 at 525.202 kb on - strand, within HER17_RS02335
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 521,617 - HER17_RS02325 0.55 +0.2 521,662 + HER17_RS02325 0.58 +1.5 521,663 - HER17_RS02325 0.58 +0.2 521,672 + HER17_RS02325 0.58 +0.3 521,673 - HER17_RS02325 0.59 +0.2 521,735 + HER17_RS02325 0.63 -0.5 521,735 + HER17_RS02325 0.63 +0.5 521,735 + HER17_RS02325 0.63 -0.3 521,801 + HER17_RS02325 0.67 +0.8 521,872 + HER17_RS02325 0.72 +0.2 521,873 - HER17_RS02325 0.72 +0.1 521,873 - HER17_RS02325 0.72 -0.1 521,917 - HER17_RS02325 0.75 +0.1 521,935 - HER17_RS02325 0.77 +0.4 522,044 + HER17_RS02325 0.84 -0.5 522,044 + HER17_RS02325 0.84 -0.4 522,058 + HER17_RS02325 0.85 +0.4 522,058 + HER17_RS02325 0.85 +0.2 522,059 - HER17_RS02325 0.85 +0.7 522,059 - HER17_RS02325 0.85 +1.1 522,059 - HER17_RS02325 0.85 -0.4 522,081 - HER17_RS02325 0.87 -0.5 522,087 - HER17_RS02325 0.87 -1.4 522,090 - HER17_RS02325 0.87 -0.0 522,125 + HER17_RS02325 0.90 -0.5 522,125 + HER17_RS02325 0.90 -0.5 522,126 - HER17_RS02325 0.90 -0.3 522,177 + +0.3 522,178 - +0.2 522,228 - +0.5 522,256 + -0.3 522,257 - +0.6 522,257 - +0.2 522,315 + -1.0 522,316 - -1.6 522,316 - +0.7 522,316 - +0.1 522,317 + +0.3 522,325 - +0.0 522,331 + +0.3 522,331 + +1.2 522,333 + +0.2 522,350 + +0.3 522,351 - -0.2 522,351 - +0.1 522,390 + -0.3 522,416 + +0.6 522,417 - -0.7 522,417 - +0.1 522,509 + -0.3 522,525 + +1.0 522,543 + -0.2 522,544 - +0.8 522,563 - +0.5 522,563 - -1.7 522,563 - -0.3 522,563 - -2.1 522,667 - +0.1 522,725 + -0.3 522,836 + HER17_RS02330 0.15 +0.4 522,837 - HER17_RS02330 0.15 +0.1 522,931 + HER17_RS02330 0.21 -0.0 523,066 + HER17_RS02330 0.29 +0.5 523,066 + HER17_RS02330 0.29 +0.2 523,133 + HER17_RS02330 0.33 -1.2 523,133 + HER17_RS02330 0.33 +0.0 523,133 + HER17_RS02330 0.33 -0.1 523,134 - HER17_RS02330 0.34 -0.3 523,134 - HER17_RS02330 0.34 +1.0 523,137 + HER17_RS02330 0.34 -0.2 523,137 + HER17_RS02330 0.34 -0.4 523,138 - HER17_RS02330 0.34 +0.0 523,138 - HER17_RS02330 0.34 +0.6 523,138 - HER17_RS02330 0.34 -1.0 523,246 + HER17_RS02330 0.40 -0.1 523,247 - HER17_RS02330 0.40 +0.7 523,324 + HER17_RS02330 0.45 +0.7 523,325 - HER17_RS02330 0.45 -0.2 523,410 + HER17_RS02330 0.50 +0.7 523,411 - HER17_RS02330 0.50 -0.2 523,425 + HER17_RS02330 0.51 -0.1 523,426 - HER17_RS02330 0.51 -0.9 523,426 - HER17_RS02330 0.51 -0.5 523,652 - HER17_RS02330 0.65 -0.7 523,665 - HER17_RS02330 0.66 +0.6 523,713 + HER17_RS02330 0.69 +0.1 523,713 + HER17_RS02330 0.69 +0.1 523,714 - HER17_RS02330 0.69 -0.2 523,724 + HER17_RS02330 0.69 -1.0 523,724 + HER17_RS02330 0.69 -0.7 523,832 + HER17_RS02330 0.76 +1.2 523,832 + HER17_RS02330 0.76 +0.6 523,833 - HER17_RS02330 0.76 -0.0 523,833 - HER17_RS02330 0.76 -1.3 523,834 + HER17_RS02330 0.76 +0.7 523,834 + HER17_RS02330 0.76 -0.6 523,834 + HER17_RS02330 0.76 -0.3 523,834 + HER17_RS02330 0.76 -0.9 523,834 + HER17_RS02330 0.76 +0.3 523,835 - HER17_RS02330 0.76 -0.3 523,835 - HER17_RS02330 0.76 +1.6 523,835 - HER17_RS02330 0.76 +0.3 523,835 - HER17_RS02330 0.76 +0.5 523,835 - HER17_RS02330 0.76 -0.7 523,835 - HER17_RS02330 0.76 +0.3 523,876 + HER17_RS02330 0.79 -2.0 523,876 + HER17_RS02330 0.79 -0.3 523,877 - HER17_RS02330 0.79 +1.2 523,877 - HER17_RS02330 0.79 -0.3 523,877 - HER17_RS02330 0.79 -1.9 523,877 - HER17_RS02330 0.79 -0.7 523,877 - HER17_RS02330 0.79 -1.2 523,877 - HER17_RS02330 0.79 -1.5 523,877 - HER17_RS02330 0.79 -2.1 523,880 + HER17_RS02330 0.79 -0.2 523,880 + HER17_RS02330 0.79 +0.8 523,880 + HER17_RS02330 0.79 -0.5 523,880 + HER17_RS02330 0.79 -0.4 523,881 - HER17_RS02330 0.79 -0.0 523,881 - HER17_RS02330 0.79 +0.8 523,881 - HER17_RS02330 0.79 -0.8 523,881 - HER17_RS02330 0.79 -0.1 523,881 - HER17_RS02330 0.79 +0.8 523,881 - HER17_RS02330 0.79 +0.7 523,881 - HER17_RS02330 0.79 -0.4 523,881 - HER17_RS02330 0.79 +0.0 523,881 - HER17_RS02330 0.79 -0.5 524,065 + -0.2 524,065 + -0.5 524,065 + +0.5 524,065 + -0.3 524,065 + +0.0 524,065 + -0.5 524,066 - -0.3 524,066 - +1.7 524,066 - -0.4 524,080 + +0.5 524,081 - -0.3 524,081 - -0.1 524,081 - +0.5 524,081 - -1.0 524,081 - +0.4 524,163 + +1.0 524,163 + +0.1 524,163 + -0.1 524,257 + +0.0 524,258 - -0.6 524,299 + +0.0 524,300 - -0.5 524,300 - +0.5 524,300 - -0.7 524,300 - -0.0 524,300 - +0.8 524,300 - +0.3 524,414 - +0.6 524,545 + +0.3 524,545 + -0.5 524,545 + +0.6 524,545 + +0.4 524,546 - +0.1 524,556 - +0.4 524,563 + +0.8 524,563 + -1.2 524,564 - +0.4 524,688 + +0.5 524,688 + -2.5 524,689 - +0.2 524,713 + -1.1 524,714 - +0.1 524,714 - +0.3 524,809 + HER17_RS02335 0.17 -0.9 524,809 + HER17_RS02335 0.17 -1.3 524,810 - HER17_RS02335 0.17 +0.0 524,810 - HER17_RS02335 0.17 +0.1 524,990 + HER17_RS02335 0.30 +0.2 524,990 + HER17_RS02335 0.30 -0.8 524,990 + HER17_RS02335 0.30 -0.1 524,990 + HER17_RS02335 0.30 +0.4 524,990 + HER17_RS02335 0.30 +0.4 524,990 + HER17_RS02335 0.30 -0.4 524,991 - HER17_RS02335 0.30 +0.7 524,991 - HER17_RS02335 0.30 +0.6 524,991 - HER17_RS02335 0.30 +0.6 524,997 + HER17_RS02335 0.30 -0.8 524,998 - HER17_RS02335 0.30 +1.5 524,998 - HER17_RS02335 0.30 -0.5 524,998 - HER17_RS02335 0.30 +0.7 524,998 - HER17_RS02335 0.30 -0.2 525,057 + HER17_RS02335 0.35 +0.6 525,201 + HER17_RS02335 0.45 +0.5 525,202 - HER17_RS02335 0.45 -0.1 525,202 - HER17_RS02335 0.45 +1.0
Or see this region's nucleotide sequence