Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21440

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,806,218	-				+0.0
4,806,271	+		HER17_RS21435	0.11	+0.3
4,806,271	+		HER17_RS21435	0.11	+0.6
4,806,328	-		HER17_RS21435	0.16	-0.7
4,806,328	-		HER17_RS21435	0.16	+1.3
4,806,349	+		HER17_RS21435	0.18	-0.1
4,806,349	+		HER17_RS21435	0.18	+0.3
4,806,350	-		HER17_RS21435	0.18	+0.8
4,806,384	-		HER17_RS21435	0.22	-0.2
4,806,409	+		HER17_RS21435	0.24	+0.6
4,806,409	+		HER17_RS21435	0.24	-0.2
4,806,410	-		HER17_RS21435	0.24	-1.5
4,806,410	-		HER17_RS21435	0.24	-0.1
4,806,410	-		HER17_RS21435	0.24	+0.1
4,806,464	+		HER17_RS21435	0.29	+0.4
4,806,469	+		HER17_RS21435	0.30	+1.1
4,806,470	-		HER17_RS21435	0.30	-0.8
4,806,693	-		HER17_RS21435	0.51	-0.8
4,806,825	+		HER17_RS21435	0.64	-0.7
4,806,825	+		HER17_RS21435	0.64	-0.1
4,806,825	+		HER17_RS21435	0.64	-0.3
4,806,825	+		HER17_RS21435	0.64	-0.3
4,806,826	-		HER17_RS21435	0.64	+0.4
4,806,826	-		HER17_RS21435	0.64	+2.6
4,806,826	-		HER17_RS21435	0.64	-0.1
4,806,826	-		HER17_RS21435	0.64	-0.0
4,806,878	-		HER17_RS21435	0.69	-0.2
4,806,878	-		HER17_RS21435	0.69	+0.4
4,806,887	+		HER17_RS21435	0.70	-0.1
4,806,888	-		HER17_RS21435	0.70	+0.5
4,806,936	-		HER17_RS21435	0.74	-0.5
4,806,940	+		HER17_RS21435	0.75	-0.7
4,806,940	+		HER17_RS21435	0.75	+0.2
4,806,941	-		HER17_RS21435	0.75	+0.6
4,806,941	-		HER17_RS21435	0.75	+0.0
4,806,945	-		HER17_RS21435	0.75	-1.0
4,806,971	-		HER17_RS21435	0.78	+0.1
4,807,001	+		HER17_RS21435	0.80	-0.1
4,807,042	+		HER17_RS21435	0.84	-0.8
4,807,043	-		HER17_RS21435	0.84	-0.5
4,807,059	+		HER17_RS21435	0.86	+1.0
4,807,185	+				-0.3
4,807,209	+				-0.1
4,807,209	+				+0.3
4,807,210	-				+0.2
4,807,210	-				+0.8
4,807,226	+				-0.1
4,807,227	-				-0.1
4,807,328	+				+0.8
4,807,329	-				-1.3
4,807,380	+		HER17_RS21440	0.12	+1.0
4,807,380	+		HER17_RS21440	0.12	+0.3
4,807,409	+		HER17_RS21440	0.14	-0.3
4,807,452	+		HER17_RS21440	0.17	-1.9
4,807,453	-		HER17_RS21440	0.17	+0.2
4,807,453	-		HER17_RS21440	0.17	+0.2
4,807,453	-		HER17_RS21440	0.17	+0.1
4,807,453	-		HER17_RS21440	0.17	+0.5
4,807,534	-		HER17_RS21440	0.23	-0.4
4,807,577	-		HER17_RS21440	0.26	-0.7
4,807,602	+		HER17_RS21440	0.28	+0.3
4,807,602	+		HER17_RS21440	0.28	+1.6
4,807,603	-		HER17_RS21440	0.28	+0.2
4,807,714	-		HER17_RS21440	0.35	-0.7
4,807,714	-		HER17_RS21440	0.35	+0.4
4,807,734	+		HER17_RS21440	0.37	-0.3
4,807,734	+		HER17_RS21440	0.37	+0.1
4,807,735	-		HER17_RS21440	0.37	-1.3
4,807,792	-		HER17_RS21440	0.41	+0.9
4,807,803	+		HER17_RS21440	0.42	-1.1
4,807,803	+		HER17_RS21440	0.42	+0.2
4,807,958	+		HER17_RS21440	0.53	-0.1
4,807,958	+		HER17_RS21440	0.53	+0.2
4,807,958	+		HER17_RS21440	0.53	+1.2
4,807,959	-		HER17_RS21440	0.53	+0.1
4,807,959	-		HER17_RS21440	0.53	-0.8
4,807,959	-		HER17_RS21440	0.53	-0.0
4,808,040	+		HER17_RS21440	0.59	-0.5
4,808,040	+		HER17_RS21440	0.59	-0.6
4,808,041	-		HER17_RS21440	0.59	+0.0
4,808,185	+		HER17_RS21440	0.69	+1.1
4,808,186	-		HER17_RS21440	0.69	-0.1
4,808,258	+		HER17_RS21440	0.74	+0.2
4,808,267	+		HER17_RS21440	0.75	+1.1
4,808,342	+		HER17_RS21440	0.80	+0.2
4,808,342	+		HER17_RS21440	0.80	+0.5
4,808,342	+		HER17_RS21440	0.80	+0.4
4,808,342	+		HER17_RS21440	0.80	+0.1
4,808,343	-		HER17_RS21440	0.80	-0.5
4,808,403	+		HER17_RS21440	0.84	-0.8
4,808,403	+		HER17_RS21440	0.84	-0.4
4,808,404	-		HER17_RS21440	0.84	-0.4
4,808,404	-		HER17_RS21440	0.84	+0.6
4,808,517	+				-0.8
4,808,518	-				-0.7
4,808,528	+				-0.2
4,808,528	+				-0.9
4,808,528	+				+0.2
4,808,536	-				-0.2
4,808,548	-				+0.8
4,808,586	+				-0.5
4,808,587	-				-0.1
4,808,598	+				-0.8
4,808,599	-				-0.5
4,808,599	-				+0.4
4,808,640	+				+0.6
4,808,672	+				-0.7
4,808,706	-				-1.4
4,808,717	+				-0.5
4,808,717	+				+0.2
4,808,718	-				-0.6
4,808,718	-				-0.3
4,808,718	-				-2.0
4,808,718	-				+0.3
4,808,718	-				-0.2
4,808,737	+				-0.2
4,808,737	+				+0.4
4,808,737	+				-0.3
4,808,737	+				+0.2
4,808,737	+				-0.8
4,808,738	-				+0.4
4,808,738	-				-0.0
4,808,738	-				+0.6
4,808,847	-		HER17_RS21445	0.63	+1.1
4,808,876	+		HER17_RS21445	0.87	-0.7
4,808,877	-		HER17_RS21445	0.88	+0.1
4,808,877	-		HER17_RS21445	0.88	-0.3
4,808,877	-		HER17_RS21445	0.88	+0.6
4,808,895	+				+0.3
4,808,895	+				-0.2
4,808,896	-				-0.3
4,808,896	-				+0.0
4,808,923	-				+0.3
4,808,926	-				-1.2
4,808,926	-				+0.6
4,808,926	-				+0.2
4,808,989	+				-0.7
4,808,990	-				-0.5
4,808,993	+				-0.2
4,808,993	+				-0.1
4,808,993	+				+1.4
4,808,994	-				+0.0
4,808,994	-				-1.8
4,808,997	+				-0.2
4,808,997	+				+0.1
4,808,998	-				-0.7
4,808,998	-				+0.3
4,808,998	-				+0.5
4,809,013	+				+0.9
4,809,013	+				-0.4
4,809,019	+				-1.1
4,809,020	-				+0.0
4,809,073	+				-1.6
4,809,074	-				+0.5
4,809,129	+		HER17_RS21450	0.13	+1.4
4,809,129	+		HER17_RS21450	0.13	-0.2
4,809,129	+		HER17_RS21450	0.13	+0.5
4,809,129	+		HER17_RS21450	0.13	+0.6
4,809,150	+		HER17_RS21450	0.14	+0.2
4,809,150	+		HER17_RS21450	0.14	+0.3
4,809,151	-		HER17_RS21450	0.15	+0.1
4,809,151	-		HER17_RS21450	0.15	-0.0
4,809,151	-		HER17_RS21450	0.15	-1.0
4,809,171	+		HER17_RS21450	0.16	+0.4
4,809,171	+		HER17_RS21450	0.16	-0.7
4,809,171	+		HER17_RS21450	0.16	-0.5
4,809,171	+		HER17_RS21450	0.16	-0.1
4,809,171	+		HER17_RS21450	0.16	-0.2
4,809,171	+		HER17_RS21450	0.16	-0.2
4,809,172	-		HER17_RS21450	0.16	-0.3
4,809,172	-		HER17_RS21450	0.16	+0.0
4,809,172	-		HER17_RS21450	0.16	+0.1
4,809,172	-		HER17_RS21450	0.16	-1.6
4,809,202	+		HER17_RS21450	0.18	-0.3
4,809,202	+		HER17_RS21450	0.18	+0.4
4,809,203	-		HER17_RS21450	0.18	-0.1
4,809,243	-		HER17_RS21450	0.21	-0.8
4,809,243	-		HER17_RS21450	0.21	-0.4
4,809,285	+		HER17_RS21450	0.24	-1.6
4,809,285	+		HER17_RS21450	0.24	-0.6
4,809,286	-		HER17_RS21450	0.24	-1.1
4,809,286	-		HER17_RS21450	0.24	+0.3
4,809,288	+		HER17_RS21450	0.25	-0.2
4,809,288	+		HER17_RS21450	0.25	+0.2
4,809,289	-		HER17_RS21450	0.25	-0.4
4,809,318	+		HER17_RS21450	0.27	-0.4
4,809,318	+		HER17_RS21450	0.27	-1.1
4,809,318	+		HER17_RS21450	0.27	+0.5
4,809,318	+		HER17_RS21450	0.27	+0.8
4,809,318	+		HER17_RS21450	0.27	+0.8
4,809,319	-		HER17_RS21450	0.27	+0.8
4,809,319	-		HER17_RS21450	0.27	-0.2
4,809,319	-		HER17_RS21450	0.27	-1.7
4,809,319	-		HER17_RS21450	0.27	+0.7
4,809,319	-		HER17_RS21450	0.27	+0.9
4,809,319	-		HER17_RS21450	0.27	-0.3
4,809,319	-		HER17_RS21450	0.27	-0.6
4,809,319	-		HER17_RS21450	0.27	-0.2
4,809,319	-		HER17_RS21450	0.27	+1.1
4,809,319	-		HER17_RS21450	0.27	-0.7
4,809,319	-		HER17_RS21450	0.27	-0.7
4,809,319	-		HER17_RS21450	0.27	+0.6
4,809,319	-		HER17_RS21450	0.27	+1.0
4,809,319	-		HER17_RS21450	0.27	+0.7
4,809,319	-		HER17_RS21450	0.27	+0.2
4,809,319	-		HER17_RS21450	0.27	+0.3
4,809,319	-		HER17_RS21450	0.27	+0.1
4,809,319	-		HER17_RS21450	0.27	+1.3
4,809,319	-		HER17_RS21450	0.27	+0.5
4,809,319	-		HER17_RS21450	0.27	+0.3
4,809,319	-		HER17_RS21450	0.27	+0.1
4,809,322	+		HER17_RS21450	0.27	-0.4
4,809,322	+		HER17_RS21450	0.27	+0.4
4,809,322	+		HER17_RS21450	0.27	+0.7
4,809,323	-		HER17_RS21450	0.27	-0.1
4,809,323	-		HER17_RS21450	0.27	+0.7
4,809,323	-		HER17_RS21450	0.27	-0.2
4,809,323	-		HER17_RS21450	0.27	+0.9
4,809,323	-		HER17_RS21450	0.27	-0.3
4,809,323	-		HER17_RS21450	0.27	+0.2
4,809,323	-		HER17_RS21450	0.27	-1.6
4,809,334	+		HER17_RS21450	0.28	+0.3
4,809,335	-		HER17_RS21450	0.28	+0.0
4,809,337	+		HER17_RS21450	0.28	+0.4
4,809,338	-		HER17_RS21450	0.28	+0.0
4,809,387	+		HER17_RS21450	0.32	-0.7
4,809,388	-		HER17_RS21450	0.32	-0.0
4,809,520	+		HER17_RS21450	0.41	+0.6
4,809,521	-		HER17_RS21450	0.41	-0.4
4,809,560	-		HER17_RS21450	0.44	-0.2
4,809,565	+		HER17_RS21450	0.45	+0.5
4,809,591	-		HER17_RS21450	0.47	+0.1
4,809,600	+		HER17_RS21450	0.47	+0.6
4,809,600	+		HER17_RS21450	0.47	-0.5
4,809,600	+		HER17_RS21450	0.47	-1.2
4,809,600	+		HER17_RS21450	0.47	+1.0
4,809,600	+		HER17_RS21450	0.47	-0.2
4,809,600	+		HER17_RS21450	0.47	+0.1
4,809,600	+		HER17_RS21450	0.47	+0.9
4,809,601	-		HER17_RS21450	0.47	+1.0
4,809,601	-		HER17_RS21450	0.47	+0.6
4,809,604	+		HER17_RS21450	0.48	+0.5
4,809,604	+		HER17_RS21450	0.48	-1.4
4,809,605	-		HER17_RS21450	0.48	+0.2
4,809,605	-		HER17_RS21450	0.48	-0.0
4,809,614	-		HER17_RS21450	0.48	+0.1