Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08270

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,821,190	+		HER17_RS08265	0.29	+1.2
1,821,191	-		HER17_RS08265	0.29	+0.6
1,821,191	-		HER17_RS08265	0.29	+0.1
1,821,192	+		HER17_RS08265	0.29	+0.5
1,821,192	+		HER17_RS08265	0.29	+0.4
1,821,192	+		HER17_RS08265	0.29	+0.5
1,821,192	+		HER17_RS08265	0.29	+1.1
1,821,192	+		HER17_RS08265	0.29	-0.6
1,821,193	-		HER17_RS08265	0.29	+0.2
1,821,193	-		HER17_RS08265	0.29	+0.7
1,821,193	-		HER17_RS08265	0.29	+1.0
1,821,193	-		HER17_RS08265	0.29	+0.5
1,821,193	-		HER17_RS08265	0.29	+1.0
1,821,193	-		HER17_RS08265	0.29	-1.4
1,821,223	+		HER17_RS08265	0.31	-0.3
1,821,224	-		HER17_RS08265	0.31	+0.6
1,821,230	-		HER17_RS08265	0.32	+0.2
1,821,254	+		HER17_RS08265	0.33	+0.4
1,821,307	+		HER17_RS08265	0.37	+0.9
1,821,308	-		HER17_RS08265	0.37	+1.1
1,821,340	-		HER17_RS08265	0.40	+0.6
1,821,403	+		HER17_RS08265	0.44	+0.2
1,821,403	+		HER17_RS08265	0.44	+0.6
1,821,403	+		HER17_RS08265	0.44	-0.8
1,821,403	+		HER17_RS08265	0.44	+0.1
1,821,403	+		HER17_RS08265	0.44	+0.4
1,821,409	+		HER17_RS08265	0.45	+0.4
1,821,409	+		HER17_RS08265	0.45	+0.5
1,821,409	+		HER17_RS08265	0.45	+0.4
1,821,410	-		HER17_RS08265	0.45	-0.3
1,821,434	+		HER17_RS08265	0.47	+1.6
1,821,438	-		HER17_RS08265	0.47	+0.4
1,821,438	-		HER17_RS08265	0.47	+0.3
1,821,502	+		HER17_RS08265	0.52	+1.2
1,821,574	+		HER17_RS08265	0.57	+0.3
1,821,575	-		HER17_RS08265	0.57	+0.9
1,821,575	-		HER17_RS08265	0.57	+0.0
1,821,576	+		HER17_RS08265	0.57	+0.6
1,821,577	-		HER17_RS08265	0.57	+0.6
1,821,577	-		HER17_RS08265	0.57	+0.4
1,821,607	+		HER17_RS08265	0.59	+0.7
1,821,607	+		HER17_RS08265	0.59	-0.2
1,821,607	+		HER17_RS08265	0.59	-0.6
1,821,608	-		HER17_RS08265	0.59	+0.4
1,821,764	-		HER17_RS08265	0.71	-0.1
1,821,764	-		HER17_RS08265	0.71	+0.3
1,821,883	-		HER17_RS08265	0.79	-0.1
1,821,901	+		HER17_RS08265	0.81	+0.3
1,821,904	+		HER17_RS08265	0.81	-0.2
1,821,904	+		HER17_RS08265	0.81	+0.7
1,821,905	-		HER17_RS08265	0.81	+0.3
1,821,928	+		HER17_RS08265	0.83	-0.2
1,821,928	+		HER17_RS08265	0.83	+0.9
1,822,030	+				+0.8
1,822,030	+				+0.2
1,822,031	-				+0.2
1,822,031	-				+0.3
1,822,031	-				-0.2
1,822,031	-				+0.0
1,822,031	-				+0.1
1,822,031	-				-1.9
1,822,031	-				+0.0
1,822,031	-				+0.8
1,822,034	+				+0.1
1,822,035	-				+0.3
1,822,035	-				+0.0
1,822,035	-				-1.2
1,822,035	-				+0.5
1,822,168	+				+0.6
1,822,168	+				-0.1
1,822,168	+				+0.9
1,822,168	+				+1.3
1,822,168	+				-0.2
1,822,169	-				+0.8
1,822,169	-				+0.0
1,822,169	-				-0.6
1,822,169	-				-0.6
1,822,169	-				+0.1
1,822,254	+		HER17_RS08270	0.12	+0.1
1,822,254	+		HER17_RS08270	0.12	-1.0
1,822,325	+		HER17_RS08270	0.22	-0.4
1,822,326	-		HER17_RS08270	0.22	+0.6
1,822,386	+		HER17_RS08270	0.31	+0.8
1,822,411	+		HER17_RS08270	0.34	+0.6
1,822,431	+		HER17_RS08270	0.37	+1.2
1,822,483	+		HER17_RS08270	0.44	+0.0
1,822,588	+		HER17_RS08270	0.59	-0.2
1,822,649	+		HER17_RS08270	0.67	+0.2
1,822,791	+		HER17_RS08270	0.87	-0.1
1,822,792	-		HER17_RS08270	0.87	+0.3
1,822,792	-		HER17_RS08270	0.87	-1.3
1,822,792	-		HER17_RS08270	0.87	-0.4
1,822,795	+		HER17_RS08270	0.87	+0.3
1,822,802	+		HER17_RS08270	0.88	-0.6
1,822,802	+		HER17_RS08270	0.88	+0.9
1,822,802	+		HER17_RS08270	0.88	-0.1
1,822,802	+		HER17_RS08270	0.88	+0.8
1,822,802	+		HER17_RS08270	0.88	+0.5
1,822,803	-		HER17_RS08270	0.88	+0.3
1,822,887	+				-0.1
1,822,887	+				-0.6
1,822,887	+				-0.1
1,822,887	+				-0.1
1,822,887	+				+0.5
1,822,887	+				+0.3
1,822,887	+				-0.6
1,822,887	+				+0.6
1,822,888	-				+0.2
1,822,888	-				-0.3
1,822,888	-				+0.6
1,822,888	-				+0.4
1,822,888	-				+0.1
1,822,888	-				-0.1
1,822,945	+				+0.1
1,822,946	-				+0.5
1,822,984	+		HER17_RS08275	0.10	+1.1
1,822,984	+		HER17_RS08275	0.10	+1.0
1,822,984	+		HER17_RS08275	0.10	+0.1
1,822,984	+		HER17_RS08275	0.10	+0.1
1,822,985	-		HER17_RS08275	0.11	-0.6
1,822,985	-		HER17_RS08275	0.11	+0.6
1,822,985	-		HER17_RS08275	0.11	+1.2
1,822,988	+		HER17_RS08275	0.11	+0.3
1,822,988	+		HER17_RS08275	0.11	+0.7
1,822,989	-		HER17_RS08275	0.11	-0.0
1,822,989	-		HER17_RS08275	0.11	+0.5
1,823,044	+		HER17_RS08275	0.17	+0.2
1,823,044	+		HER17_RS08275	0.17	+0.1
1,823,044	+		HER17_RS08275	0.17	+1.0
1,823,044	+		HER17_RS08275	0.17	-0.4
1,823,045	-		HER17_RS08275	0.17	+0.1
1,823,045	-		HER17_RS08275	0.17	+0.1
1,823,045	-		HER17_RS08275	0.17	-0.5
1,823,045	-		HER17_RS08275	0.17	+0.4
1,823,396	-		HER17_RS08275	0.52	+0.1
1,823,399	+		HER17_RS08275	0.52	+0.2
1,823,399	+		HER17_RS08275	0.52	+0.6
1,823,399	+		HER17_RS08275	0.52	+0.7
1,823,399	+		HER17_RS08275	0.52	-0.3
1,823,400	-		HER17_RS08275	0.52	+1.6
1,823,404	+		HER17_RS08275	0.53	-0.4
1,823,438	+		HER17_RS08275	0.56	+0.2
1,823,438	+		HER17_RS08275	0.56	+1.8
1,823,438	+		HER17_RS08275	0.56	+0.3
1,823,439	-		HER17_RS08275	0.56	-0.0
1,823,513	-		HER17_RS08275	0.64	-0.5
1,823,587	+		HER17_RS08275	0.71	+0.1
1,823,649	+		HER17_RS08275	0.77	-0.0
1,823,680	-		HER17_RS08275	0.81	-0.1
1,823,764	+		HER17_RS08275	0.89	+0.7
1,823,764	+		HER17_RS08275	0.89	+0.2
1,823,765	-		HER17_RS08275	0.89	+0.1
1,823,774	+				+0.4
1,823,774	+				-0.3
1,823,775	-				+0.3
1,823,775	-				-0.6
1,823,837	+				+0.3
1,823,837	+				+0.7
1,823,873	-				+0.5
1,823,873	-				-0.2
1,823,873	-				+1.1
1,823,880	+				+0.8