Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21315

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,773,720	-		HER17_RS21310	0.59	+0.6
4,773,726	-		HER17_RS21310	0.59	-0.3
4,773,773	+		HER17_RS21310	0.61	-1.5
4,773,777	+		HER17_RS21310	0.62	-0.2
4,773,778	-		HER17_RS21310	0.62	-0.2
4,773,778	-		HER17_RS21310	0.62	-0.9
4,773,783	+		HER17_RS21310	0.62	+0.1
4,773,784	-		HER17_RS21310	0.62	-0.2
4,773,837	+		HER17_RS21310	0.65	+0.2
4,773,838	-		HER17_RS21310	0.65	+0.6
4,773,891	+		HER17_RS21310	0.68	-0.1
4,773,891	+		HER17_RS21310	0.68	-1.7
4,773,892	-		HER17_RS21310	0.68	-0.0
4,773,892	-		HER17_RS21310	0.68	+1.1
4,773,892	-		HER17_RS21310	0.68	+1.0
4,773,924	+		HER17_RS21310	0.69	-0.3
4,773,924	+		HER17_RS21310	0.69	+0.6
4,773,925	-		HER17_RS21310	0.69	+0.0
4,773,925	-		HER17_RS21310	0.69	+0.2
4,773,925	-		HER17_RS21310	0.69	+0.3
4,773,957	+		HER17_RS21310	0.71	+0.0
4,773,957	+		HER17_RS21310	0.71	+0.1
4,773,958	-		HER17_RS21310	0.71	+0.3
4,773,958	-		HER17_RS21310	0.71	-0.1
4,774,056	-		HER17_RS21310	0.76	-0.1
4,774,100	-		HER17_RS21310	0.79	-0.0
4,774,146	+		HER17_RS21310	0.81	-0.9
4,774,147	-		HER17_RS21310	0.81	-1.1
4,774,177	+		HER17_RS21310	0.83	+0.6
4,774,178	-		HER17_RS21310	0.83	-0.2
4,774,215	+		HER17_RS21310	0.85	+0.5
4,774,215	+		HER17_RS21310	0.85	+0.5
4,774,216	-		HER17_RS21310	0.85	+0.3
4,774,216	-		HER17_RS21310	0.85	-2.5
4,774,223	+		HER17_RS21310	0.85	+0.5
4,774,223	+		HER17_RS21310	0.85	-0.3
4,774,223	+		HER17_RS21310	0.85	-1.1
4,774,224	-		HER17_RS21310	0.85	-0.1
4,774,224	-		HER17_RS21310	0.85	+0.2
4,774,224	-		HER17_RS21310	0.85	-1.7
4,774,263	+		HER17_RS21310	0.87	+0.2
4,774,264	-		HER17_RS21310	0.87	-0.3
4,774,341	+				-0.1
4,774,351	+				-2.2
4,774,351	+				+0.3
4,774,351	+				-0.3
4,774,352	-				-1.9
4,774,352	-				+0.6
4,774,352	-				+0.5
4,774,352	-				+0.4
4,774,352	-				+1.4
4,774,352	-				+0.7
4,774,352	-				-0.4
4,774,352	-				+0.5
4,774,411	+				+0.8
4,774,503	+				-0.9
4,774,504	-				+0.9
4,774,532	+				-0.4
4,774,560	-				-0.6
4,774,582	-				+0.2
4,774,582	-				+1.3
4,774,627	+				+0.3
4,774,695	+				+0.1
4,774,695	+				-0.1
4,774,695	+				-1.1
4,774,696	-				+0.3
4,774,696	-				-0.4
4,774,776	+				+0.0
4,774,777	-				+0.1
4,774,777	-				+0.1
4,774,777	-				-0.5
4,774,829	+		HER17_RS21315	0.10	-0.4
4,774,830	-		HER17_RS21315	0.10	-0.7
4,774,849	+		HER17_RS21315	0.12	+0.4
4,774,850	-		HER17_RS21315	0.12	-0.0
4,774,850	-		HER17_RS21315	0.12	+0.4
4,774,957	+		HER17_RS21315	0.20	-0.2
4,774,975	+		HER17_RS21315	0.21	-0.7
4,774,975	+		HER17_RS21315	0.21	-0.3
4,774,976	-		HER17_RS21315	0.21	+0.3
4,774,976	-		HER17_RS21315	0.21	-0.2
4,774,976	-		HER17_RS21315	0.21	-0.3
4,775,024	-		HER17_RS21315	0.25	-0.5
4,775,057	+		HER17_RS21315	0.28	-0.1
4,775,066	-		HER17_RS21315	0.28	-0.4
4,775,126	-		HER17_RS21315	0.33	-0.6
4,775,128	-		HER17_RS21315	0.33	+0.5
4,775,198	+		HER17_RS21315	0.38	-1.9
4,775,199	-		HER17_RS21315	0.38	-0.7
4,775,199	-		HER17_RS21315	0.38	+0.6
4,775,391	+		HER17_RS21315	0.53	-0.7
4,775,458	+		HER17_RS21315	0.58	+1.0
4,775,459	-		HER17_RS21315	0.58	-0.6
4,775,470	+		HER17_RS21315	0.59	-0.0
4,775,471	-		HER17_RS21315	0.59	-0.1
4,775,487	+		HER17_RS21315	0.60	+0.3
4,775,488	-		HER17_RS21315	0.60	+0.5
4,775,488	-		HER17_RS21315	0.60	+0.2
4,775,497	+		HER17_RS21315	0.61	+0.3
4,775,498	-		HER17_RS21315	0.61	+0.1
4,775,501	+		HER17_RS21315	0.61	-0.4
4,775,501	+		HER17_RS21315	0.61	-0.6
4,775,501	+		HER17_RS21315	0.61	+0.9
4,775,501	+		HER17_RS21315	0.61	+0.5
4,775,502	-		HER17_RS21315	0.61	-0.5
4,775,502	-		HER17_RS21315	0.61	-0.3
4,775,539	-		HER17_RS21315	0.64	+0.2
4,775,571	+		HER17_RS21315	0.67	+0.7
4,775,571	+		HER17_RS21315	0.67	-0.9
4,775,571	+		HER17_RS21315	0.67	+0.3
4,775,571	+		HER17_RS21315	0.67	+0.3
4,775,571	+		HER17_RS21315	0.67	-1.2
4,775,571	+		HER17_RS21315	0.67	-0.4
4,775,571	+		HER17_RS21315	0.67	-0.2
4,775,571	+		HER17_RS21315	0.67	+0.5
4,775,571	+		HER17_RS21315	0.67	+0.1
4,775,571	+		HER17_RS21315	0.67	+1.1
4,775,571	+		HER17_RS21315	0.67	+0.1
4,775,571	+		HER17_RS21315	0.67	-0.1
4,775,572	-		HER17_RS21315	0.67	-0.3
4,775,572	-		HER17_RS21315	0.67	-0.2
4,775,572	-		HER17_RS21315	0.67	-0.7
4,775,572	-		HER17_RS21315	0.67	+1.0
4,775,572	-		HER17_RS21315	0.67	-0.8
4,775,572	-		HER17_RS21315	0.67	+0.4
4,775,572	-		HER17_RS21315	0.67	-0.1
4,775,572	-		HER17_RS21315	0.67	+0.3
4,775,572	-		HER17_RS21315	0.67	+1.0
4,775,572	-		HER17_RS21315	0.67	+1.1
4,775,572	-		HER17_RS21315	0.67	-0.5
4,775,572	-		HER17_RS21315	0.67	+0.0
4,775,572	-		HER17_RS21315	0.67	+1.3
4,775,572	-		HER17_RS21315	0.67	+0.3
4,775,572	-		HER17_RS21315	0.67	-0.4
4,775,572	-		HER17_RS21315	0.67	-0.1
4,775,572	-		HER17_RS21315	0.67	-0.8
4,775,572	-		HER17_RS21315	0.67	-0.7
4,775,572	-		HER17_RS21315	0.67	+2.2
4,775,576	-		HER17_RS21315	0.67	-1.2
4,775,616	+		HER17_RS21315	0.70	-1.6
4,775,617	-		HER17_RS21315	0.70	-0.7
4,775,617	-		HER17_RS21315	0.70	-1.7
4,775,647	+		HER17_RS21315	0.73	+0.7
4,775,648	-		HER17_RS21315	0.73	-0.5
4,775,648	-		HER17_RS21315	0.73	-0.4
4,775,779	+		HER17_RS21315	0.83	+0.0
4,775,827	+		HER17_RS21315	0.86	+1.6
4,775,827	+		HER17_RS21315	0.86	+0.1
4,775,827	+		HER17_RS21315	0.86	+0.2
4,775,827	+		HER17_RS21315	0.86	-0.1
4,775,827	+		HER17_RS21315	0.86	-0.1
4,775,827	+		HER17_RS21315	0.86	-0.0
4,775,827	+		HER17_RS21315	0.86	-1.0
4,775,827	+		HER17_RS21315	0.86	-0.4
4,775,828	-		HER17_RS21315	0.86	+1.8
4,775,828	-		HER17_RS21315	0.86	-1.0
4,775,828	-		HER17_RS21315	0.86	+1.2
4,775,828	-		HER17_RS21315	0.86	-0.1
4,775,828	-		HER17_RS21315	0.86	-0.2
4,775,828	-		HER17_RS21315	0.86	+1.0
4,775,828	-		HER17_RS21315	0.86	-0.2
4,775,828	-		HER17_RS21315	0.86	+0.3
4,775,972	-				+0.3
4,776,015	+				-1.1
4,776,015	+				+0.5
4,776,015	+				-0.3
4,776,016	-				+0.2
4,776,016	-				+0.9
4,776,016	-				-0.0
4,776,038	+				+0.3
4,776,039	-				+0.2
4,776,039	-				-0.3
4,776,050	-				-0.4
4,776,050	-				+1.0
4,776,070	-				+1.5
4,776,070	-				+0.3
4,776,074	+				+0.1
4,776,075	-				+0.5
4,776,075	-				-0.6
4,776,122	-				+0.3
4,776,130	-				-0.2
4,776,184	-				-0.3
4,776,252	+				-2.3
4,776,252	+				+0.2
4,776,252	+				+0.0
4,776,253	-				+0.1
4,776,253	-				+0.1
4,776,253	-				-0.1
4,776,253	-				+0.8
4,776,253	-				+0.0
4,776,253	-				-0.3
4,776,253	-				+0.5
4,776,253	-				+0.3
4,776,253	-				-0.1
4,776,256	+				+0.5
4,776,256	+				-0.2
4,776,256	+				+0.5
4,776,256	+				-0.2
4,776,256	+				-0.3
4,776,257	-				-0.6
4,776,279	+				+0.3
4,776,301	+				-0.2
4,776,481	+		HER17_RS21320	0.22	+0.3
4,776,588	-		HER17_RS21320	0.30	-0.8
4,776,615	+		HER17_RS21320	0.32	-0.2
4,776,615	+		HER17_RS21320	0.32	+0.2
4,776,671	-		HER17_RS21320	0.36	-0.1
4,776,723	-		HER17_RS21320	0.40	-0.5
4,776,789	+		HER17_RS21320	0.45	-0.1
4,776,789	+		HER17_RS21320	0.45	+0.4
4,776,876	+		HER17_RS21320	0.52	-0.7
4,776,877	-		HER17_RS21320	0.52	-0.5
4,776,877	-		HER17_RS21320	0.52	-0.5