Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15395

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,451,150	+		HER17_RS15385	0.71	+0.1
3,451,177	+		HER17_RS15385	0.73	-0.2
3,451,177	+		HER17_RS15385	0.73	-0.2
3,451,178	-		HER17_RS15385	0.73	+0.2
3,451,178	-		HER17_RS15385	0.73	+0.0
3,451,178	-		HER17_RS15385	0.73	-0.3
3,451,178	-		HER17_RS15385	0.73	+0.3
3,451,178	-		HER17_RS15385	0.73	+0.3
3,451,178	-		HER17_RS15385	0.73	-0.4
3,451,181	+		HER17_RS15385	0.74	-0.6
3,451,181	+		HER17_RS15385	0.74	-0.5
3,451,181	+		HER17_RS15385	0.74	-0.2
3,451,181	+		HER17_RS15385	0.74	-0.3
3,451,181	+		HER17_RS15385	0.74	-0.9
3,451,182	-		HER17_RS15385	0.74	+0.8
3,451,182	-		HER17_RS15385	0.74	-0.2
3,451,182	-		HER17_RS15385	0.74	-0.4
3,451,410	+				-0.0
3,451,411	-				-0.8
3,451,411	-				-2.0
3,451,432	+				+1.2
3,451,432	+				-0.2
3,451,433	-				-0.1
3,451,520	+				-0.0
3,451,521	-				-0.4
3,451,521	-				-0.6
3,451,655	+				-0.7
3,451,667	-				-0.1
3,451,808	+		HER17_RS15390	0.28	+1.4
3,451,809	-		HER17_RS15390	0.28	-0.6
3,451,809	-		HER17_RS15390	0.28	-0.4
3,451,812	+		HER17_RS15390	0.29	-0.9
3,451,812	+		HER17_RS15390	0.29	-0.2
3,451,812	+		HER17_RS15390	0.29	+0.4
3,451,812	+		HER17_RS15390	0.29	+0.2
3,451,813	-		HER17_RS15390	0.29	+0.2
3,451,813	-		HER17_RS15390	0.29	-1.8
3,451,813	-		HER17_RS15390	0.29	+0.4
3,451,813	-		HER17_RS15390	0.29	+0.2
3,451,813	-		HER17_RS15390	0.29	+0.5
3,451,892	+		HER17_RS15390	0.51	-0.4
3,451,893	-		HER17_RS15390	0.51	+0.4
3,452,008	+		HER17_RS15390	0.82	-0.1
3,452,019	+		HER17_RS15390	0.85	-0.4
3,452,019	+		HER17_RS15390	0.85	+0.4
3,452,020	-		HER17_RS15390	0.85	-0.3
3,452,020	-		HER17_RS15390	0.85	-1.0
3,452,091	+				+0.6
3,452,091	+				-0.4
3,452,091	+				-0.0
3,452,092	-				-1.7
3,452,092	-				-0.2
3,452,092	-				-0.1
3,452,092	-				-0.5
3,452,093	+				+0.7
3,452,093	+				-0.1
3,452,093	+				+0.0
3,452,094	-				+0.2
3,452,102	+				-0.4
3,452,102	+				-0.1
3,452,103	-				+0.6
3,452,115	+				+1.4
3,452,115	+				+0.7
3,452,115	+				+1.1
3,452,144	+				-0.5
3,452,145	-				-0.0
3,452,145	-				-0.9
3,452,166	-				-0.4
3,452,449	+		HER17_RS15395	0.15	+0.3
3,452,684	-		HER17_RS15395	0.26	+0.1
3,452,694	+		HER17_RS15395	0.26	-0.4
3,452,694	+		HER17_RS15395	0.26	-0.4
3,452,694	+		HER17_RS15395	0.26	+0.1
3,452,695	-		HER17_RS15395	0.27	+0.1
3,452,695	-		HER17_RS15395	0.27	-0.1
3,452,738	+		HER17_RS15395	0.29	+0.7
3,452,738	+		HER17_RS15395	0.29	+1.5
3,452,766	+		HER17_RS15395	0.30	+0.6
3,452,807	+		HER17_RS15395	0.32	-0.4
3,452,807	+		HER17_RS15395	0.32	+0.6
3,452,980	+		HER17_RS15395	0.40	+0.1
3,452,980	+		HER17_RS15395	0.40	-0.6
3,452,980	+		HER17_RS15395	0.40	+1.3
3,452,981	-		HER17_RS15395	0.40	-0.5
3,452,981	-		HER17_RS15395	0.40	-0.1
3,452,981	-		HER17_RS15395	0.40	+0.3
3,452,981	-		HER17_RS15395	0.40	-1.9
3,452,981	-		HER17_RS15395	0.40	-0.3
3,453,028	+		HER17_RS15395	0.43	+1.1
3,453,028	+		HER17_RS15395	0.43	-0.9
3,453,029	-		HER17_RS15395	0.43	-0.2
3,453,136	+		HER17_RS15395	0.48	-0.3
3,453,137	-		HER17_RS15395	0.48	-0.5
3,453,137	-		HER17_RS15395	0.48	-0.2
3,453,137	-		HER17_RS15395	0.48	+0.1
3,453,137	-		HER17_RS15395	0.48	+0.7
3,453,185	+		HER17_RS15395	0.50	+0.6
3,453,254	-		HER17_RS15395	0.54	-0.5
3,453,254	-		HER17_RS15395	0.54	-0.1
3,453,254	-		HER17_RS15395	0.54	-1.0
3,453,318	+		HER17_RS15395	0.57	+1.0
3,453,358	-		HER17_RS15395	0.59	-1.4
3,453,410	+		HER17_RS15395	0.61	-1.4
3,453,623	+		HER17_RS15395	0.72	+1.5
3,453,659	-		HER17_RS15395	0.73	+0.1
3,453,689	-		HER17_RS15395	0.75	-0.1
3,453,800	-		HER17_RS15395	0.80	-0.2
3,453,895	+		HER17_RS15395	0.85	+0.4
3,453,895	+		HER17_RS15395	0.85	-0.0
3,453,896	-		HER17_RS15395	0.85	+0.1
3,453,896	-		HER17_RS15395	0.85	+0.2
3,453,896	-		HER17_RS15395	0.85	-0.3
3,453,896	-		HER17_RS15395	0.85	-0.6
3,453,917	+		HER17_RS15395	0.86	+0.9
3,453,962	-		HER17_RS15395	0.88	+0.1
3,454,544	+		HER17_RS15400	0.71	+0.6
3,454,545	-		HER17_RS15400	0.71	-0.2
3,454,548	+		HER17_RS15400	0.72	-0.4
3,454,548	+		HER17_RS15400	0.72	+0.7
3,454,548	+		HER17_RS15400	0.72	+0.1
3,454,548	+		HER17_RS15400	0.72	-0.4
3,454,548	+		HER17_RS15400	0.72	-0.1
3,454,548	+		HER17_RS15400	0.72	+0.1
3,454,549	-		HER17_RS15400	0.72	-0.1
3,454,549	-		HER17_RS15400	0.72	-0.2
3,454,549	-		HER17_RS15400	0.72	-0.4
3,454,549	-		HER17_RS15400	0.72	-0.8
3,454,563	+		HER17_RS15400	0.75	-0.9
3,454,563	+		HER17_RS15400	0.75	-0.7
3,454,563	+		HER17_RS15400	0.75	+0.2
3,454,563	+		HER17_RS15400	0.75	-0.3
3,454,648	+				-0.2
3,454,649	-				-0.6
3,454,649	-				+1.2
3,454,667	+				+0.0
3,454,667	+				+0.1
3,454,668	-				-0.2
3,454,728	+				-0.0
3,454,728	+				-0.3
3,454,729	-				-1.2
3,454,770	-				+0.5
3,454,770	-				+0.7
3,454,770	-				-0.2
3,454,805	-				+0.1
3,454,830	-				+0.1
3,454,833	+				+0.5
3,454,855	+				+0.1
3,454,934	+				-0.7
3,454,934	+				-2.3
3,454,934	+				-2.3
3,454,935	-				-4.0
3,454,977	+		HER17_RS15405	0.12	-3.9
3,455,141	+		HER17_RS15405	0.35	-1.9
3,455,141	+		HER17_RS15405	0.35	-1.6
3,455,142	-		HER17_RS15405	0.35	-4.0
3,455,142	-		HER17_RS15405	0.35	-3.6