Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21765

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,876,065	-				-0.2
4,876,072	-				+0.1
4,876,074	+				+0.3
4,876,106	+				+0.2
4,876,107	-				-2.5
4,876,107	-				+0.1
4,876,123	-				-0.1
4,876,123	-				-0.6
4,876,136	+				+0.7
4,876,136	+				+0.2
4,876,137	-				-0.1
4,876,137	-				-0.2
4,876,139	-				-1.2
4,876,139	-				-0.2
4,876,140	+				-0.5
4,876,214	+				+0.3
4,876,215	-				+0.1
4,876,228	+				-0.2
4,876,228	+				+0.6
4,876,229	-				-0.3
4,876,229	-				-0.1
4,876,244	-				-0.4
4,876,244	-				-1.0
4,876,255	+				+0.9
4,876,257	-				-0.7
4,876,260	+				+0.4
4,876,260	+				-0.4
4,876,260	+				-0.3
4,876,260	+				+0.2
4,876,261	-				-0.0
4,876,261	-				+0.3
4,876,261	-				-0.4
4,876,261	-				-0.3
4,876,275	-				-0.3
4,876,275	-				-0.8
4,876,291	-				-0.5
4,876,291	-				-0.1
4,876,291	-				+0.8
4,876,314	-				-0.0
4,876,324	-				+0.0
4,876,324	-				+0.5
4,876,365	-				+0.2
4,876,370	+				+0.9
4,876,371	-				+0.7
4,876,377	-				+0.6
4,876,377	-				+0.1
4,876,399	+				-0.4
4,876,399	+				+0.8
4,876,399	+				-0.2
4,876,400	-				-2.0
4,876,400	-				+0.4
4,876,400	-				+0.5
4,876,418	-				-0.9
4,876,453	+		HER17_RS21760	0.12	-0.1
4,876,476	+		HER17_RS21760	0.16	+0.5
4,876,476	+		HER17_RS21760	0.16	+0.2
4,876,477	-		HER17_RS21760	0.16	-0.5
4,876,477	-		HER17_RS21760	0.16	+0.4
4,876,481	+		HER17_RS21760	0.16	-0.5
4,876,482	-		HER17_RS21760	0.17	+1.0
4,876,482	-		HER17_RS21760	0.17	-0.5
4,876,539	-		HER17_RS21760	0.25	-0.1
4,876,539	-		HER17_RS21760	0.25	+0.2
4,876,539	-		HER17_RS21760	0.25	+0.6
4,876,542	+		HER17_RS21760	0.25	-1.4
4,876,542	+		HER17_RS21760	0.25	-0.2
4,876,542	+		HER17_RS21760	0.25	-0.6
4,876,542	+		HER17_RS21760	0.25	+0.2
4,876,542	+		HER17_RS21760	0.25	+0.2
4,876,542	+		HER17_RS21760	0.25	-0.9
4,876,542	+		HER17_RS21760	0.25	-0.2
4,876,542	+		HER17_RS21760	0.25	-1.3
4,876,543	-		HER17_RS21760	0.26	-0.0
4,876,543	-		HER17_RS21760	0.26	-1.7
4,876,543	-		HER17_RS21760	0.26	+0.0
4,876,543	-		HER17_RS21760	0.26	-0.0
4,876,543	-		HER17_RS21760	0.26	-0.3
4,876,543	-		HER17_RS21760	0.26	+0.8
4,876,579	+		HER17_RS21760	0.31	-0.1
4,876,584	-		HER17_RS21760	0.32	-0.1
4,876,634	+		HER17_RS21760	0.39	-0.6
4,876,649	+		HER17_RS21760	0.41	+0.0
4,876,650	-		HER17_RS21760	0.42	-0.1
4,876,685	+		HER17_RS21760	0.47	-0.4
4,876,715	+		HER17_RS21760	0.51	+0.4
4,876,719	+		HER17_RS21760	0.52	-0.5
4,876,719	+		HER17_RS21760	0.52	-0.4
4,876,719	+		HER17_RS21760	0.52	-0.2
4,876,719	+		HER17_RS21760	0.52	+0.1
4,876,720	-		HER17_RS21760	0.52	-2.0
4,876,720	-		HER17_RS21760	0.52	+1.3
4,876,720	-		HER17_RS21760	0.52	+0.1
4,876,720	-		HER17_RS21760	0.52	+0.4
4,876,720	-		HER17_RS21760	0.52	-0.5
4,876,720	-		HER17_RS21760	0.52	+0.2
4,876,720	-		HER17_RS21760	0.52	+0.2
4,876,720	-		HER17_RS21760	0.52	-0.8
4,876,720	-		HER17_RS21760	0.52	+0.2
4,876,720	-		HER17_RS21760	0.52	-0.3
4,876,720	-		HER17_RS21760	0.52	-1.0
4,876,724	+		HER17_RS21760	0.53	+0.7
4,876,724	+		HER17_RS21760	0.53	-0.6
4,876,724	+		HER17_RS21760	0.53	-0.2
4,876,724	+		HER17_RS21760	0.53	+0.1
4,876,724	+		HER17_RS21760	0.53	+0.9
4,876,724	+		HER17_RS21760	0.53	-0.1
4,876,725	-		HER17_RS21760	0.53	+0.2
4,876,725	-		HER17_RS21760	0.53	-1.3
4,876,728	-		HER17_RS21760	0.53	+1.7
4,876,846	+		HER17_RS21760	0.71	-0.4
4,876,846	+		HER17_RS21760	0.71	-0.6
4,876,847	-		HER17_RS21760	0.71	+0.8
4,876,847	-		HER17_RS21760	0.71	-0.7
4,876,847	-		HER17_RS21760	0.71	-0.1
4,876,847	-		HER17_RS21760	0.71	-1.4
4,876,866	+		HER17_RS21760	0.74	+0.3
4,876,866	+		HER17_RS21760	0.74	-0.0
4,876,866	+		HER17_RS21760	0.74	+0.3
4,876,867	-		HER17_RS21760	0.74	+1.3
4,876,890	+		HER17_RS21760	0.77	-2.3
4,876,938	+		HER17_RS21760	0.84	-0.0
4,876,939	-		HER17_RS21760	0.85	-0.2
4,876,946	+		HER17_RS21760	0.86	+0.2
4,876,947	-		HER17_RS21760	0.86	+0.2
4,876,947	-		HER17_RS21760	0.86	+0.8
4,877,040	+				+0.5
4,877,040	+				-0.3
4,877,049	-				-1.1
4,877,054	+				+0.3
4,877,054	+				+0.0
4,877,054	+				+0.1
4,877,054	+				+1.6
4,877,055	-				+0.5
4,877,056	+				+0.6
4,877,056	+				+0.8
4,877,056	+				-0.4
4,877,057	-				+0.3
4,877,057	-				+0.5
4,877,065	+				-0.2
4,877,065	+				-0.2
4,877,065	+				-0.6
4,877,066	-				-0.2
4,877,066	-				-1.0
4,877,066	-				-0.6
4,877,066	-				-0.3
4,877,066	-				-0.8
4,877,105	-		HER17_RS21765	0.12	+0.6
4,877,107	+		HER17_RS21765	0.13	-0.6
4,877,107	+		HER17_RS21765	0.13	+0.1
4,877,108	-		HER17_RS21765	0.13	+0.8
4,877,140	-		HER17_RS21765	0.22	-2.6
4,877,150	+		HER17_RS21765	0.25	-0.1
4,877,150	+		HER17_RS21765	0.25	+0.1
4,877,155	-		HER17_RS21765	0.26	-0.6
4,877,155	-		HER17_RS21765	0.26	+0.2
4,877,190	-		HER17_RS21765	0.36	+0.3
4,877,255	+		HER17_RS21765	0.54	-0.3
4,877,255	+		HER17_RS21765	0.54	+0.1
4,877,256	-		HER17_RS21765	0.54	-0.4
4,877,277	+		HER17_RS21765	0.60	-0.5
4,877,277	+		HER17_RS21765	0.60	+1.0
4,877,277	+		HER17_RS21765	0.60	-1.4
4,877,277	+		HER17_RS21765	0.60	+0.2
4,877,277	+		HER17_RS21765	0.60	+0.1
4,877,277	+		HER17_RS21765	0.60	+0.4
4,877,278	-		HER17_RS21765	0.60	-0.6
4,877,278	-		HER17_RS21765	0.60	-1.0
4,877,278	-		HER17_RS21765	0.60	-0.0
4,877,278	-		HER17_RS21765	0.60	-0.6
4,877,278	-		HER17_RS21765	0.60	-0.5
4,877,278	-		HER17_RS21765	0.60	+0.1
4,877,299	-		HER17_RS21765	0.66	+0.1
4,877,378	+		HER17_RS21765	0.88	+0.2
4,877,378	+		HER17_RS21765	0.88	-0.5
4,877,402	+				+0.9
4,877,414	+				+0.5
4,877,414	+				-0.3
4,877,414	+				-0.1
4,877,414	+				-0.1
4,877,415	-				-0.3
4,877,431	-				-0.4
4,877,436	+				-0.4
4,877,436	+				+1.6
4,877,436	+				-0.5
4,877,436	+				+0.5
4,877,436	+				-0.2
4,877,436	+				-0.3
4,877,437	-				+0.5
4,877,437	-				+0.8
4,877,437	-				-0.9
4,877,437	-				+0.6
4,877,490	-		HER17_RS21770	0.11	-0.1
4,877,495	+		HER17_RS21770	0.12	-1.1
4,877,495	+		HER17_RS21770	0.12	-0.2
4,877,496	-		HER17_RS21770	0.12	+0.9
4,877,506	+		HER17_RS21770	0.13	-0.4
4,877,506	+		HER17_RS21770	0.13	-0.4
4,877,507	-		HER17_RS21770	0.14	+0.1
4,877,507	-		HER17_RS21770	0.14	+0.2
4,877,507	-		HER17_RS21770	0.14	+1.2
4,877,522	-		HER17_RS21770	0.16	-1.2
4,877,522	-		HER17_RS21770	0.16	-0.1
4,877,522	-		HER17_RS21770	0.16	-0.4
4,877,536	-		HER17_RS21770	0.18	+0.0
4,877,576	+		HER17_RS21770	0.24	-0.0
4,877,576	+		HER17_RS21770	0.24	-0.4
4,877,577	-		HER17_RS21770	0.24	-0.6
4,877,577	-		HER17_RS21770	0.24	+0.2
4,877,577	-		HER17_RS21770	0.24	+0.3
4,877,577	-		HER17_RS21770	0.24	-0.0
4,877,577	-		HER17_RS21770	0.24	+0.4
4,877,578	+		HER17_RS21770	0.24	-0.9
4,877,624	+		HER17_RS21770	0.31	-0.7
4,877,624	+		HER17_RS21770	0.31	-0.4
4,877,624	+		HER17_RS21770	0.31	-1.1
4,877,624	+		HER17_RS21770	0.31	-1.0
4,877,624	+		HER17_RS21770	0.31	-0.2
4,877,624	+		HER17_RS21770	0.31	-2.0
4,877,624	+		HER17_RS21770	0.31	+0.4
4,877,624	+		HER17_RS21770	0.31	+0.3
4,877,625	-		HER17_RS21770	0.32	-0.9
4,877,625	-		HER17_RS21770	0.32	-0.9
4,877,625	-		HER17_RS21770	0.32	+0.1
4,877,643	+		HER17_RS21770	0.34	+0.2
4,877,644	-		HER17_RS21770	0.34	+0.3
4,877,747	+		HER17_RS21770	0.50	-0.2
4,877,757	+		HER17_RS21770	0.52	+0.2
4,877,766	-		HER17_RS21770	0.53	+1.1
4,877,777	+		HER17_RS21770	0.55	-0.5
4,877,777	+		HER17_RS21770	0.55	-0.1
4,877,777	+		HER17_RS21770	0.55	-0.2
4,877,778	-		HER17_RS21770	0.55	-0.3
4,877,778	-		HER17_RS21770	0.55	-0.8
4,877,778	-		HER17_RS21770	0.55	+0.1
4,877,778	-		HER17_RS21770	0.55	-0.6
4,877,789	-		HER17_RS21770	0.56	+0.2
4,877,792	-		HER17_RS21770	0.57	+0.7
4,877,899	+		HER17_RS21770	0.73	+0.2
4,878,036	-				+0.7
4,878,036	-				+0.1
4,878,056	+				+0.1
4,878,056	+				-0.3
4,878,057	-				-0.5
4,878,074	+				-0.1
4,878,075	-				+0.4
4,878,083	-				-0.3
4,878,086	+				-0.0
4,878,086	+				+0.3
4,878,087	-				+0.2
4,878,087	-				-0.5
4,878,089	+				+1.4
4,878,089	+				-0.3
4,878,089	+				-0.2
4,878,089	+				-0.4
4,878,090	-				+0.0
4,878,090	-				+0.0
4,878,090	-				+0.1
4,878,090	-				-0.1
4,878,090	-				+0.0
4,878,090	-				-0.1
4,878,097	+				-0.5
4,878,097	+				+0.3
4,878,097	+				-0.2
4,878,097	+				-0.5
4,878,098	-				-0.4
4,878,098	-				-0.5
4,878,098	-				+0.3
4,878,098	-				-2.1
4,878,098	-				+0.6
4,878,098	-				+0.6
4,878,098	-				+0.4
4,878,108	-				-0.3
4,878,108	-				-1.6
4,878,115	+				-0.6
4,878,173	+				-0.6
4,878,173	+				+1.2
4,878,174	-				+0.7
4,878,174	-				-0.1
4,878,174	-				-2.1
4,878,175	+				+1.2
4,878,175	+				+0.8
4,878,175	+				+0.4
4,878,175	+				-0.8
4,878,175	+				-0.4
4,878,175	+				+1.2
4,878,176	-				-0.9
4,878,176	-				-1.1
4,878,176	-				+0.0
4,878,176	-				+0.2
4,878,176	-				-0.2
4,878,204	+				+0.1
4,878,204	+				-0.3
4,878,205	-				-0.7
4,878,205	-				-0.3
4,878,328	-		HER17_RS21775	0.10	+0.4
4,878,377	+		HER17_RS21775	0.14	-0.4
4,878,378	-		HER17_RS21775	0.14	+0.6
4,878,415	-		HER17_RS21775	0.16	+0.0
4,878,415	-		HER17_RS21775	0.16	-0.0
4,878,415	-		HER17_RS21775	0.16	+1.5
4,878,415	-		HER17_RS21775	0.16	-0.2