Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS20615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,618,015	-				+0.1
4,618,036	-				-0.6
4,618,036	-				+0.3
4,618,036	-				-0.5
4,618,066	-				-1.2
4,618,075	+				-0.0
4,618,075	+				+0.1
4,618,103	+				-0.7
4,618,107	+				-1.0
4,618,107	+				-0.4
4,618,107	+				-0.2
4,618,107	+				+0.6
4,618,108	-				+0.6
4,618,108	-				+0.1
4,618,108	-				-0.3
4,618,108	-				+0.0
4,618,111	+				+0.6
4,618,112	-				-0.2
4,618,115	-				-0.6
4,618,131	-				+0.7
4,618,134	+				-0.5
4,618,135	-				+0.4
4,618,317	-		HER17_RS20615	0.13	-0.8
4,618,322	+		HER17_RS20615	0.14	-0.4
4,618,322	+		HER17_RS20615	0.14	+0.6
4,618,343	+		HER17_RS20615	0.15	-0.3
4,618,343	+		HER17_RS20615	0.15	+0.1
4,618,344	-		HER17_RS20615	0.15	-0.7
4,618,344	-		HER17_RS20615	0.15	+0.2
4,618,360	+		HER17_RS20615	0.16	-0.2
4,618,360	+		HER17_RS20615	0.16	+0.4
4,618,361	-		HER17_RS20615	0.16	-0.4
4,618,361	-		HER17_RS20615	0.16	+0.5
4,618,361	-		HER17_RS20615	0.16	-0.4
4,618,427	+		HER17_RS20615	0.20	-0.0
4,618,428	-		HER17_RS20615	0.20	+0.5
4,618,513	-		HER17_RS20615	0.26	+0.3
4,618,547	+		HER17_RS20615	0.28	+0.5
4,618,548	-		HER17_RS20615	0.28	-0.2
4,618,548	-		HER17_RS20615	0.28	-0.3
4,618,548	-		HER17_RS20615	0.28	-0.4
4,618,548	-		HER17_RS20615	0.28	+1.2
4,618,550	+		HER17_RS20615	0.28	-0.9
4,618,550	+		HER17_RS20615	0.28	-0.0
4,618,551	-		HER17_RS20615	0.28	-0.5
4,618,551	-		HER17_RS20615	0.28	+0.1
4,618,551	-		HER17_RS20615	0.28	+0.2
4,618,625	+		HER17_RS20615	0.33	+0.1
4,618,639	+		HER17_RS20615	0.34	+0.1
4,618,639	+		HER17_RS20615	0.34	+0.6
4,618,639	+		HER17_RS20615	0.34	+0.2
4,618,640	-		HER17_RS20615	0.34	-0.3
4,618,640	-		HER17_RS20615	0.34	-0.3
4,618,640	-		HER17_RS20615	0.34	+0.2
4,618,640	-		HER17_RS20615	0.34	+0.1
4,618,697	+		HER17_RS20615	0.38	-1.8
4,618,768	+		HER17_RS20615	0.42	+0.7
4,618,769	-		HER17_RS20615	0.42	-0.2
4,618,859	+		HER17_RS20615	0.48	-0.6
4,618,900	+		HER17_RS20615	0.51	-0.5
4,618,901	-		HER17_RS20615	0.51	+0.1
4,618,938	+		HER17_RS20615	0.53	+0.2
4,618,938	+		HER17_RS20615	0.53	+0.5
4,618,938	+		HER17_RS20615	0.53	+2.2
4,618,970	+		HER17_RS20615	0.55	+0.3
4,618,970	+		HER17_RS20615	0.55	-0.4
4,618,971	-		HER17_RS20615	0.55	+0.5
4,618,971	-		HER17_RS20615	0.55	+0.5
4,619,004	-		HER17_RS20615	0.57	+0.1
4,619,166	-		HER17_RS20615	0.68	+0.1
4,619,184	-		HER17_RS20615	0.69	-0.8
4,619,192	+		HER17_RS20615	0.69	-0.2
4,619,192	+		HER17_RS20615	0.69	+0.0
4,619,192	+		HER17_RS20615	0.69	+0.1
4,619,299	-		HER17_RS20615	0.76	-0.6
4,619,374	-		HER17_RS20615	0.81	-0.9
4,619,374	-		HER17_RS20615	0.81	-0.2
4,619,402	+		HER17_RS20615	0.83	+0.2
4,619,402	+		HER17_RS20615	0.83	+2.4
4,619,460	+		HER17_RS20615	0.86	-0.2
4,619,460	+		HER17_RS20615	0.86	+0.2
4,619,610	+				+0.1
4,619,611	-				-0.7
4,619,634	+				+0.1
4,619,634	+				-0.9
4,619,634	+				-0.2
4,619,635	-				+0.2
4,619,635	-				-0.4
4,619,635	-				+0.0
4,619,653	+				-1.4
4,619,653	+				+0.3
4,619,654	-				+0.1
4,619,654	-				-0.6
4,619,658	+				-0.4
4,619,659	-				+0.0
4,619,659	-				+0.3
4,619,659	-				+0.2
4,619,667	-				+0.7
4,619,723	-				+0.8
4,619,806	+				+0.7
4,619,872	+				+0.5
4,619,872	+				+0.3
4,619,873	-				-0.3
4,619,873	-				-0.6
4,619,879	+				+0.2
4,619,880	-				+0.4
4,619,880	-				+1.0
4,619,880	-				+0.2
4,619,880	-				+0.6
4,619,898	+				-1.0
4,619,899	-				-0.9
4,619,932	+				+0.5
4,619,933	-				-0.4
4,619,933	-				+0.3
4,619,951	+				+1.0
4,619,952	-				+0.4
4,620,272	-		HER17_RS20620	0.27	+1.4
4,620,321	+		HER17_RS20620	0.31	+0.0
4,620,321	+		HER17_RS20620	0.31	+0.9
4,620,322	-		HER17_RS20620	0.31	-0.6
4,620,322	-		HER17_RS20620	0.31	+0.4
4,620,322	-		HER17_RS20620	0.31	+0.2
4,620,333	-		HER17_RS20620	0.32	+0.6
4,620,341	-		HER17_RS20620	0.32	+0.7
4,620,374	+		HER17_RS20620	0.35	+0.5
4,620,566	+		HER17_RS20620	0.49	+0.1
4,620,567	-		HER17_RS20620	0.49	+0.1
4,620,567	-		HER17_RS20620	0.49	+0.9
4,620,601	+		HER17_RS20620	0.51	+0.1