Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS20190

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,530,649	-				+0.2
4,530,756	+		HER17_RS20185	0.19	+0.2
4,530,804	+		HER17_RS20185	0.24	-0.1
4,530,804	+		HER17_RS20185	0.24	-0.3
4,530,804	+		HER17_RS20185	0.24	+0.0
4,530,804	+		HER17_RS20185	0.24	-0.2
4,530,818	-		HER17_RS20185	0.26	+0.4
4,530,818	-		HER17_RS20185	0.26	+0.8
4,530,830	-		HER17_RS20185	0.27	+0.4
4,530,905	+		HER17_RS20185	0.34	-0.4
4,530,905	+		HER17_RS20185	0.34	-0.5
4,530,905	+		HER17_RS20185	0.34	-0.2
4,530,954	-		HER17_RS20185	0.39	+0.1
4,531,054	-		HER17_RS20185	0.49	+0.8
4,531,105	+		HER17_RS20185	0.54	-0.0
4,531,105	+		HER17_RS20185	0.54	+0.2
4,531,168	+		HER17_RS20185	0.60	+1.3
4,531,172	+		HER17_RS20185	0.61	-0.5
4,531,172	+		HER17_RS20185	0.61	+0.4
4,531,172	+		HER17_RS20185	0.61	+0.1
4,531,172	+		HER17_RS20185	0.61	-0.5
4,531,172	+		HER17_RS20185	0.61	+0.3
4,531,172	+		HER17_RS20185	0.61	+1.0
4,531,173	-		HER17_RS20185	0.61	+0.5
4,531,319	+		HER17_RS20185	0.76	+0.5
4,531,319	+		HER17_RS20185	0.76	+0.3
4,531,319	+		HER17_RS20185	0.76	-1.2
4,531,319	+		HER17_RS20185	0.76	-1.1
4,531,319	+		HER17_RS20185	0.76	+0.6
4,531,320	-		HER17_RS20185	0.76	+0.2
4,531,320	-		HER17_RS20185	0.76	-0.7
4,531,320	-		HER17_RS20185	0.76	+0.3
4,531,320	-		HER17_RS20185	0.76	-0.2
4,531,320	-		HER17_RS20185	0.76	+0.6
4,531,320	-		HER17_RS20185	0.76	-0.2
4,531,320	-		HER17_RS20185	0.76	+0.5
4,531,323	+		HER17_RS20185	0.76	-0.5
4,531,390	+		HER17_RS20185	0.83	+0.1
4,531,390	+		HER17_RS20185	0.83	+1.2
4,531,391	-		HER17_RS20185	0.83	+0.6
4,531,391	-		HER17_RS20185	0.83	+0.0
4,531,565	+				-0.9
4,531,565	+				-0.1
4,531,582	+				+0.5
4,531,583	-				+0.8
4,531,586	+				+0.0
4,531,587	-				+0.2
4,531,587	-				-0.1
4,531,587	-				+1.1
4,531,589	+				-0.3
4,531,589	+				+0.6
4,531,674	-				+0.3
4,531,721	+		HER17_RS20190	0.13	+0.2
4,531,767	+		HER17_RS20190	0.21	-0.2
4,531,768	-		HER17_RS20190	0.21	+0.2
4,531,779	+		HER17_RS20190	0.23	+0.6
4,531,910	+		HER17_RS20190	0.45	-0.5
4,531,910	+		HER17_RS20190	0.45	+0.1
4,531,910	+		HER17_RS20190	0.45	-0.2
4,531,911	-		HER17_RS20190	0.45	+1.1
4,531,924	+		HER17_RS20190	0.47	+0.3
4,531,925	-		HER17_RS20190	0.47	+0.1
4,531,925	-		HER17_RS20190	0.47	+0.5
4,531,995	-		HER17_RS20190	0.59	-0.6
4,531,995	-		HER17_RS20190	0.59	+0.2
4,532,009	+		HER17_RS20190	0.61	+0.3
4,532,009	+		HER17_RS20190	0.61	+0.1
4,532,010	-		HER17_RS20190	0.61	+0.1
4,532,054	+		HER17_RS20190	0.69	+1.6
4,532,054	+		HER17_RS20190	0.69	+0.4
4,532,054	+		HER17_RS20190	0.69	-0.5
4,532,054	+		HER17_RS20190	0.69	+0.6
4,532,055	-		HER17_RS20190	0.69	+0.2
4,532,055	-		HER17_RS20190	0.69	-1.1
4,532,104	+		HER17_RS20190	0.77	+0.3
4,532,109	-		HER17_RS20190	0.78	-1.0
4,532,109	-		HER17_RS20190	0.78	-0.4
4,532,169	+		HER17_RS20190	0.88	+1.2
4,532,212	+				-0.0
4,532,212	+				+1.5
4,532,214	+				+0.5
4,532,214	+				+0.4
4,532,215	-				+0.2
4,532,215	-				-0.1
4,532,317	+				+1.1
4,532,329	+				+0.2
4,532,329	+				-0.1
4,532,330	-				+0.3
4,532,338	+				+0.4
4,532,338	+				+0.4
4,532,342	+				+1.1
4,532,361	+				-0.8
4,532,361	+				-0.1
4,532,362	-				+0.0
4,532,362	-				+1.1
4,532,368	-				+0.4
4,532,369	+				+0.2
4,532,370	-				-0.3
4,532,429	+				-0.2
4,532,486	+				-0.3
4,532,571	+		HER17_RS20195	0.17	-1.0
4,532,847	+		HER17_RS20195	0.77	+0.9
4,532,875	+		HER17_RS20195	0.84	-0.7