Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS18175

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,092,168	-		HER17_RS18170	0.21	+0.3
4,092,205	+		HER17_RS18170	0.25	-0.5
4,092,205	+		HER17_RS18170	0.25	+0.2
4,092,205	+		HER17_RS18170	0.25	-0.4
4,092,245	+		HER17_RS18170	0.29	+0.2
4,092,286	+		HER17_RS18170	0.33	+0.2
4,092,390	+		HER17_RS18170	0.43	+1.4
4,092,391	-		HER17_RS18170	0.44	+0.1
4,092,480	+		HER17_RS18170	0.52	+0.2
4,092,545	+		HER17_RS18170	0.59	+0.0
4,092,545	+		HER17_RS18170	0.59	+0.8
4,092,612	+		HER17_RS18170	0.65	+0.6
4,092,612	+		HER17_RS18170	0.65	+0.2
4,092,944	-				+0.4
4,092,944	-				-0.1
4,092,957	+				+0.1
4,092,958	-				-1.2
4,092,958	-				+0.2
4,092,960	+				-0.2
4,092,960	+				-0.1
4,092,961	-				-0.5
4,093,018	-				+0.4
4,093,026	-				+0.5
4,093,044	-				+0.4
4,093,048	+				-0.0
4,093,049	-				+0.2
4,093,049	-				-0.7
4,093,380	-		HER17_RS18175	0.17	+1.0
4,093,381	+		HER17_RS18175	0.18	-2.2
4,093,464	-		HER17_RS18175	0.22	+1.0
4,093,468	+		HER17_RS18175	0.22	-0.1
4,093,469	-		HER17_RS18175	0.22	+0.2
4,094,989	-				+0.2
4,094,993	-				-0.3
4,095,115	+				-1.4
4,095,116	-				-0.5
4,095,116	-				+0.2
4,095,131	-				-1.1
4,095,131	-				-0.8
4,095,175	-				+0.5
4,095,216	-				-0.5
4,095,280	-		HER17_RS18185	0.17	-1.2
4,095,284	-		HER17_RS18185	0.18	-0.6
4,095,291	-		HER17_RS18185	0.18	-1.9
4,095,291	-		HER17_RS18185	0.18	+0.4
4,095,294	+		HER17_RS18185	0.19	-1.6
4,095,299	-		HER17_RS18185	0.19	-0.5
4,095,299	-		HER17_RS18185	0.19	-0.0
4,095,345	-		HER17_RS18185	0.24	+0.8
4,095,352	-		HER17_RS18185	0.25	-0.8
4,095,352	-		HER17_RS18185	0.25	-1.1
4,095,398	-		HER17_RS18185	0.30	-1.8
4,095,400	+		HER17_RS18185	0.31	-1.6
4,095,411	-		HER17_RS18185	0.32	-0.1
4,095,446	-		HER17_RS18185	0.36	-1.3
4,095,503	-		HER17_RS18185	0.42	-0.8
4,095,570	+		HER17_RS18185	0.50	-2.9
4,095,578	-		HER17_RS18185	0.51	+0.5
4,095,623	-		HER17_RS18185	0.56	-2.5
4,095,623	-		HER17_RS18185	0.56	-1.0
4,095,629	-		HER17_RS18185	0.56	-1.8
4,095,646	-		HER17_RS18185	0.58	-0.6
4,095,700	+		HER17_RS18185	0.65	-2.0
4,095,701	-		HER17_RS18185	0.65	-1.0
4,095,701	-		HER17_RS18185	0.65	-0.5
4,095,701	-		HER17_RS18185	0.65	-1.3
4,095,732	-		HER17_RS18185	0.68	-0.9
4,095,800	-		HER17_RS18185	0.76	-0.7
4,095,817	+		HER17_RS18185	0.78	-1.5
4,095,817	+		HER17_RS18185	0.78	-1.8
4,095,819	+		HER17_RS18185	0.78	-0.2
4,095,819	+		HER17_RS18185	0.78	-1.5
4,095,819	+		HER17_RS18185	0.78	-0.0
4,095,819	+		HER17_RS18185	0.78	-0.3
4,095,819	+		HER17_RS18185	0.78	-0.3
4,095,819	+		HER17_RS18185	0.78	-1.2
4,095,820	-		HER17_RS18185	0.78	+0.0
4,095,820	-		HER17_RS18185	0.78	-0.7
4,095,820	-		HER17_RS18185	0.78	-1.6
4,095,820	-		HER17_RS18185	0.78	-0.2
4,095,820	-		HER17_RS18185	0.78	-1.5
4,095,822	+		HER17_RS18185	0.78	-0.8
4,095,822	+		HER17_RS18185	0.78	-1.0
4,095,823	-		HER17_RS18185	0.78	-4.1
4,095,823	-		HER17_RS18185	0.78	-0.3
4,095,905	+		HER17_RS18185	0.88	-1.7
4,095,905	+		HER17_RS18185	0.88	+0.2
4,095,906	-		HER17_RS18185	0.88	+0.1