Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17125

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,854,315	+		HER17_RS17120	0.53	+0.7
3,854,405	-		HER17_RS17120	0.59	-0.0
3,854,451	+		HER17_RS17120	0.62	-0.8
3,854,471	+		HER17_RS17120	0.63	+0.4
3,854,471	+		HER17_RS17120	0.63	+1.3
3,854,471	+		HER17_RS17120	0.63	+0.4
3,854,471	+		HER17_RS17120	0.63	-0.8
3,854,471	+		HER17_RS17120	0.63	+0.4
3,854,472	-		HER17_RS17120	0.63	-1.1
3,854,472	-		HER17_RS17120	0.63	+0.9
3,854,472	-		HER17_RS17120	0.63	-0.5
3,854,472	-		HER17_RS17120	0.63	-0.4
3,854,472	-		HER17_RS17120	0.63	+0.1
3,854,472	-		HER17_RS17120	0.63	+0.1
3,854,472	-		HER17_RS17120	0.63	+0.0
3,854,472	-		HER17_RS17120	0.63	+0.4
3,854,472	-		HER17_RS17120	0.63	-0.3
3,854,473	+		HER17_RS17120	0.63	+1.3
3,854,473	+		HER17_RS17120	0.63	+0.8
3,854,473	+		HER17_RS17120	0.63	+0.0
3,854,473	+		HER17_RS17120	0.63	-0.5
3,854,474	-		HER17_RS17120	0.63	+0.5
3,854,474	-		HER17_RS17120	0.63	-0.5
3,854,675	+		HER17_RS17120	0.75	-0.4
3,854,675	+		HER17_RS17120	0.75	-0.9
3,854,676	-		HER17_RS17120	0.75	-0.1
3,854,676	-		HER17_RS17120	0.75	-0.2
3,854,676	-		HER17_RS17120	0.75	+0.1
3,854,676	-		HER17_RS17120	0.75	+0.2
3,854,699	+		HER17_RS17120	0.77	+0.3
3,854,777	+		HER17_RS17120	0.81	+0.2
3,854,880	-		HER17_RS17120	0.88	+0.8
3,855,026	-				+1.2
3,855,026	-				-0.4
3,855,080	+				+0.4
3,855,084	+				-1.3
3,855,084	+				-1.0
3,855,084	+				+0.2
3,855,085	-				+1.1
3,855,085	-				+0.5
3,855,085	-				+0.3
3,855,085	-				-0.5
3,855,092	-				+0.3
3,855,101	-				+0.5
3,855,142	-				+0.0
3,855,142	-				-1.4
3,855,149	-				-1.6
3,855,149	-				+0.4
3,855,159	+				+0.1
3,855,160	-				-0.1
3,855,160	-				-0.4
3,855,192	-				+1.2
3,855,210	-				+0.3
3,855,218	-				+1.3
3,855,248	+				+0.3
3,855,248	+				+0.4
3,855,248	+				-0.1
3,855,249	-				+0.2
3,855,249	-				-0.9
3,855,249	-				-0.3
3,855,259	-				+0.7
3,855,265	+				+0.0
3,855,266	-				+0.4
3,855,266	-				-0.8
3,855,266	-				+0.7
3,855,303	+				+0.1
3,855,304	-				+0.4
3,855,422	+				-0.4
3,855,461	+		HER17_RS17125	0.11	-0.7
3,855,461	+		HER17_RS17125	0.11	-0.4
3,855,461	+		HER17_RS17125	0.11	+0.5
3,855,462	-		HER17_RS17125	0.11	-0.6
3,855,472	+		HER17_RS17125	0.11	+0.4
3,855,481	-		HER17_RS17125	0.12	+0.1
3,855,644	+		HER17_RS17125	0.22	+0.8
3,855,645	-		HER17_RS17125	0.23	+1.4
3,855,645	-		HER17_RS17125	0.23	-0.0
3,855,773	-		HER17_RS17125	0.31	+0.5
3,856,044	+		HER17_RS17125	0.48	+0.1
3,856,056	+		HER17_RS17125	0.49	+0.1
3,856,413	+		HER17_RS17125	0.72	-0.7
3,856,507	+		HER17_RS17125	0.79	+0.0
3,856,507	+		HER17_RS17125	0.79	-0.7
3,856,507	+		HER17_RS17125	0.79	+0.1
3,856,508	-		HER17_RS17125	0.79	+1.0
3,856,508	-		HER17_RS17125	0.79	+0.4
3,856,508	-		HER17_RS17125	0.79	+0.7
3,856,508	-		HER17_RS17125	0.79	+0.2
3,856,512	+		HER17_RS17125	0.79	+0.1
3,856,512	+		HER17_RS17125	0.79	-0.0
3,856,512	+		HER17_RS17125	0.79	+0.4
3,856,513	-		HER17_RS17125	0.79	+0.1
3,856,544	+		HER17_RS17125	0.81	-0.1
3,856,545	-		HER17_RS17125	0.81	-0.0
3,856,807	-				-1.0
3,856,821	+				+0.3
3,856,824	+				-0.1
3,856,825	-				-0.1
3,856,875	+				-1.4
3,856,921	+				-0.0
3,857,080	+				-0.7
3,857,100	+				-0.7
3,857,100	+				-0.2
3,857,101	-				+1.2
3,857,101	-				-0.3
3,857,101	-				+0.1
3,857,104	+				-0.0
3,857,104	+				-0.7
3,857,105	-				-0.0
3,857,105	-				+0.8
3,857,105	-				-0.3
3,857,113	+				+0.5
3,857,113	+				-0.6
3,857,222	-		HER17_RS17130	0.14	-0.2
3,857,302	+		HER17_RS17130	0.20	+0.2
3,857,303	-		HER17_RS17130	0.20	+0.2
3,857,303	-		HER17_RS17130	0.20	+0.2
3,857,307	+		HER17_RS17130	0.20	+0.2
3,857,308	-		HER17_RS17130	0.20	-0.1
3,857,455	-		HER17_RS17130	0.30	+1.2
3,857,455	-		HER17_RS17130	0.30	-1.1
3,857,464	+		HER17_RS17130	0.30	+0.2
3,857,464	+		HER17_RS17130	0.30	+0.1
3,857,515	+		HER17_RS17130	0.34	+0.1
3,857,581	+		HER17_RS17130	0.38	-0.7
3,857,690	+		HER17_RS17130	0.45	-0.1
3,857,725	+		HER17_RS17130	0.47	+0.2
3,857,726	-		HER17_RS17130	0.47	-1.0
3,857,726	-		HER17_RS17130	0.47	+0.0
3,857,726	-		HER17_RS17130	0.47	+0.0
3,857,746	+		HER17_RS17130	0.49	+0.6
3,857,746	+		HER17_RS17130	0.49	+0.8
3,857,746	+		HER17_RS17130	0.49	-0.4
3,857,747	-		HER17_RS17130	0.49	-0.2
3,857,760	+		HER17_RS17130	0.50	-0.3
3,857,761	-		HER17_RS17130	0.50	-0.1
3,857,774	-		HER17_RS17130	0.50	-0.5