Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS16800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,780,489	-				+0.4
3,780,489	-				+0.3
3,780,489	-				+0.3
3,780,497	-				-0.7
3,780,561	+				+0.6
3,780,562	-				-0.7
3,780,680	+		HER17_RS16795	0.19	-0.8
3,780,681	-		HER17_RS16795	0.19	+0.3
3,780,681	-		HER17_RS16795	0.19	+0.5
3,780,759	-		HER17_RS16795	0.27	+0.2
3,780,778	+		HER17_RS16795	0.29	+0.0
3,780,778	+		HER17_RS16795	0.29	+0.7
3,780,801	+		HER17_RS16795	0.31	+0.5
3,780,857	+		HER17_RS16795	0.37	+0.2
3,780,859	+		HER17_RS16795	0.37	+0.2
3,780,859	+		HER17_RS16795	0.37	+0.9
3,780,859	+		HER17_RS16795	0.37	-0.2
3,780,859	+		HER17_RS16795	0.37	-0.8
3,780,874	+		HER17_RS16795	0.38	-2.4
3,780,892	+		HER17_RS16795	0.40	+0.2
3,780,902	+		HER17_RS16795	0.41	+0.1
3,780,903	-		HER17_RS16795	0.41	-1.0
3,780,912	+		HER17_RS16795	0.42	-0.4
3,780,912	+		HER17_RS16795	0.42	+0.5
3,780,913	-		HER17_RS16795	0.42	-0.2
3,780,913	-		HER17_RS16795	0.42	+0.0
3,780,917	+		HER17_RS16795	0.43	+0.2
3,780,918	-		HER17_RS16795	0.43	+1.9
3,780,918	-		HER17_RS16795	0.43	+0.1
3,780,929	-		HER17_RS16795	0.44	+0.1
3,780,945	+		HER17_RS16795	0.45	-0.4
3,780,946	-		HER17_RS16795	0.46	-0.0
3,780,962	-		HER17_RS16795	0.47	-0.3
3,780,989	-		HER17_RS16795	0.50	+0.1
3,780,993	+		HER17_RS16795	0.50	+1.3
3,780,994	-		HER17_RS16795	0.50	+0.1
3,781,018	+		HER17_RS16795	0.53	+0.9
3,781,018	+		HER17_RS16795	0.53	+0.1
3,781,035	+		HER17_RS16795	0.55	-0.7
3,781,035	+		HER17_RS16795	0.55	-0.6
3,781,036	-		HER17_RS16795	0.55	-0.1
3,781,063	-		HER17_RS16795	0.57	-0.2
3,781,067	+		HER17_RS16795	0.58	-0.6
3,781,068	-		HER17_RS16795	0.58	+1.7
3,781,083	-		HER17_RS16795	0.59	+0.3
3,781,089	+		HER17_RS16795	0.60	+0.3
3,781,090	-		HER17_RS16795	0.60	+0.0
3,781,091	+		HER17_RS16795	0.60	+0.1
3,781,092	-		HER17_RS16795	0.60	-1.7
3,781,092	-		HER17_RS16795	0.60	+0.6
3,781,099	+		HER17_RS16795	0.61	+0.7
3,781,099	+		HER17_RS16795	0.61	-0.5
3,781,206	-		HER17_RS16795	0.72	+1.1
3,781,229	-		HER17_RS16795	0.74	+0.4
3,781,243	+		HER17_RS16795	0.76	-1.5
3,781,243	+		HER17_RS16795	0.76	-0.4
3,781,244	-		HER17_RS16795	0.76	+0.3
3,781,244	-		HER17_RS16795	0.76	+0.4
3,781,249	+		HER17_RS16795	0.76	-0.4
3,781,250	-		HER17_RS16795	0.76	+0.4
3,781,353	+		HER17_RS16795	0.87	-0.4
3,781,353	+		HER17_RS16795	0.87	+0.1
3,781,353	+		HER17_RS16795	0.87	-0.1
3,781,354	-		HER17_RS16795	0.87	+0.5
3,781,354	-		HER17_RS16795	0.87	+0.4
3,781,395	-				+0.7
3,781,395	-				+0.8
3,781,452	-				+0.9
3,781,484	+				-0.1
3,781,591	-				-0.7
3,781,593	-				-0.0
3,781,680	+		HER17_RS16800	0.15	+0.9
3,781,688	-		HER17_RS16800	0.15	+0.0
3,781,688	-		HER17_RS16800	0.15	-0.0
3,781,688	-		HER17_RS16800	0.15	+0.4
3,781,714	+		HER17_RS16800	0.17	-0.4
3,781,719	+		HER17_RS16800	0.17	+1.6
3,781,719	+		HER17_RS16800	0.17	-0.3
3,781,720	-		HER17_RS16800	0.18	-1.2
3,781,720	-		HER17_RS16800	0.18	-0.4
3,781,725	+		HER17_RS16800	0.18	+0.1
3,781,783	+		HER17_RS16800	0.22	+0.2
3,781,784	-		HER17_RS16800	0.22	-0.3
3,781,816	-		HER17_RS16800	0.25	-1.7
3,781,816	-		HER17_RS16800	0.25	+0.6
3,781,851	+		HER17_RS16800	0.27	-0.3
3,781,902	+		HER17_RS16800	0.31	+0.1
3,781,932	+		HER17_RS16800	0.33	+0.5
3,781,933	-		HER17_RS16800	0.33	+0.5
3,781,967	+		HER17_RS16800	0.35	-1.2
3,781,967	+		HER17_RS16800	0.35	-1.6
3,781,968	-		HER17_RS16800	0.36	+0.4
3,781,984	-		HER17_RS16800	0.37	-0.1
3,782,051	+		HER17_RS16800	0.42	-0.9
3,782,153	+		HER17_RS16800	0.49	+0.3
3,782,154	-		HER17_RS16800	0.49	-0.1
3,782,154	-		HER17_RS16800	0.49	+0.3
3,782,182	+		HER17_RS16800	0.51	+0.1
3,782,182	+		HER17_RS16800	0.51	+0.1
3,782,185	+		HER17_RS16800	0.51	-0.2
3,782,227	-		HER17_RS16800	0.54	-0.1
3,782,235	+		HER17_RS16800	0.55	-0.3
3,782,236	-		HER17_RS16800	0.55	+0.4
3,782,268	+		HER17_RS16800	0.57	-0.0
3,782,346	+		HER17_RS16800	0.63	-0.3
3,782,347	-		HER17_RS16800	0.63	+0.5
3,782,454	-		HER17_RS16800	0.71	-0.3
3,782,454	-		HER17_RS16800	0.71	-0.2
3,782,478	-		HER17_RS16800	0.72	+0.0
3,782,489	+		HER17_RS16800	0.73	+0.5
3,782,510	+		HER17_RS16800	0.75	+0.6
3,782,580	+		HER17_RS16800	0.80	-0.7
3,782,622	+		HER17_RS16800	0.83	-0.3
3,782,622	+		HER17_RS16800	0.83	-0.3
3,782,623	-		HER17_RS16800	0.83	-0.2
3,782,623	-		HER17_RS16800	0.83	-0.4
3,782,626	+		HER17_RS16800	0.83	-0.9
3,782,626	+		HER17_RS16800	0.83	-0.1
3,782,626	+		HER17_RS16800	0.83	-0.2
3,782,627	-		HER17_RS16800	0.83	+0.1
3,782,654	+		HER17_RS16800	0.85	-0.1
3,782,655	-		HER17_RS16800	0.85	+0.7
3,782,697	+		HER17_RS16800	0.88	-1.1
3,782,698	-		HER17_RS16800	0.88	+0.2
3,782,749	-				+0.1
3,782,755	+				+0.3
3,782,787	-				-0.1
3,782,825	+				+0.1
3,782,826	-				+0.0
3,782,937	-				+0.0
3,782,937	-				-0.2
3,782,977	+				-0.1
3,783,007	-		HER17_RS16805	0.12	+0.4
3,783,028	-		HER17_RS16805	0.14	-0.4
3,783,112	+		HER17_RS16805	0.21	-0.1
3,783,112	+		HER17_RS16805	0.21	-0.8
3,783,122	+		HER17_RS16805	0.22	-0.7
3,783,123	-		HER17_RS16805	0.22	-0.0
3,783,199	-		HER17_RS16805	0.28	-0.1
3,783,232	-		HER17_RS16805	0.31	+0.1
3,783,290	+		HER17_RS16805	0.36	-0.1
3,783,376	+		HER17_RS16805	0.43	-0.2
3,783,377	-		HER17_RS16805	0.43	+0.8
3,783,428	+		HER17_RS16805	0.47	-0.7
3,783,428	+		HER17_RS16805	0.47	+0.5
3,783,431	+		HER17_RS16805	0.47	-1.8
3,783,431	+		HER17_RS16805	0.47	-0.3
3,783,432	-		HER17_RS16805	0.48	-0.2
3,783,504	-		HER17_RS16805	0.53	+0.0
3,783,506	+		HER17_RS16805	0.54	-0.2
3,783,506	+		HER17_RS16805	0.54	+0.2
3,783,506	+		HER17_RS16805	0.54	-0.2
3,783,507	-		HER17_RS16805	0.54	+0.3
3,783,507	-		HER17_RS16805	0.54	+0.4
3,783,507	-		HER17_RS16805	0.54	-0.7
3,783,564	-		HER17_RS16805	0.58	+0.6
3,783,607	+		HER17_RS16805	0.62	-0.1
3,783,620	+		HER17_RS16805	0.63	-0.5
3,783,695	+		HER17_RS16805	0.69	+0.4
3,783,739	+		HER17_RS16805	0.73	-0.6
3,783,757	+		HER17_RS16805	0.74	+0.2
3,783,757	+		HER17_RS16805	0.74	-0.1
3,783,806	-		HER17_RS16805	0.78	+1.1
3,783,819	-		HER17_RS16805	0.79	-0.1