Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,566,635	-		HER17_RS15870	0.68	-0.2
3,566,635	-		HER17_RS15870	0.68	-0.4
3,566,654	-		HER17_RS15870	0.70	-0.6
3,566,654	-		HER17_RS15870	0.70	+0.3
3,566,654	-		HER17_RS15870	0.70	-0.3
3,566,714	+		HER17_RS15870	0.74	-0.4
3,566,714	+		HER17_RS15870	0.74	-1.1
3,566,714	+		HER17_RS15870	0.74	-0.8
3,566,750	+		HER17_RS15870	0.76	+1.0
3,566,751	-		HER17_RS15870	0.76	+0.2
3,566,982	+				-0.1
3,566,983	-				-1.6
3,566,983	-				+0.6
3,566,983	-				+0.2
3,566,999	+				-0.0
3,567,000	-				-0.1
3,567,097	-				-0.4
3,567,106	-				-0.4
3,567,108	+				-2.5
3,567,108	+				+1.3
3,567,145	-				+0.6
3,567,148	-				-0.2
3,567,161	-				-0.6
3,567,164	+				+1.9
3,567,165	-				+0.8
3,567,168	+				+0.2
3,567,182	+				-0.4
3,567,182	+				-0.1
3,567,183	-				-0.6
3,567,202	+				-0.3
3,567,212	+				-0.6
3,567,213	-				+0.1
3,567,292	+				-0.5
3,567,311	+				-0.5
3,567,312	-				-0.3
3,567,322	+				-0.8
3,567,339	-				-0.4
3,567,382	-				+0.6
3,567,436	+				+0.3
3,567,443	-				+0.5
3,567,502	-				-0.5
3,567,502	-				-0.0
3,567,514	-				-0.7
3,567,544	-				-0.8
3,567,549	-				-1.1
3,567,716	-		HER17_RS15875	0.20	-0.3
3,567,790	+		HER17_RS15875	0.27	-0.8
3,567,790	+		HER17_RS15875	0.27	-0.4
3,567,790	+		HER17_RS15875	0.27	-1.2
3,567,800	-		HER17_RS15875	0.28	+0.8
3,567,819	-		HER17_RS15875	0.30	-0.1
3,567,845	+		HER17_RS15875	0.33	-0.1
3,567,846	-		HER17_RS15875	0.33	+0.0
3,568,003	+		HER17_RS15875	0.49	+0.5
3,568,004	-		HER17_RS15875	0.49	+0.8
3,568,022	+		HER17_RS15875	0.51	+0.8
3,568,078	-		HER17_RS15875	0.57	-2.3
3,568,158	-		HER17_RS15875	0.65	-0.7
3,568,321	-		HER17_RS15875	0.82	-0.6
3,568,321	-		HER17_RS15875	0.82	-1.0
3,568,353	-		HER17_RS15875	0.86	+0.2
3,568,488	+				+0.4
3,568,491	+				-0.3
3,568,542	+				-0.1
3,568,543	-				+0.1
3,568,543	-				-0.4
3,568,543	-				+0.8
3,568,546	-				-0.8
3,568,675	+				+0.1
3,568,675	+				-1.0
3,568,675	+				-0.6
3,568,676	-				+1.1
3,568,676	-				-0.1
3,568,676	-				-0.5
3,568,676	-				-0.2
3,568,676	-				+1.2
3,568,676	-				-0.2
3,568,676	-				-1.8
3,568,676	-				-1.2
3,568,776	-		HER17_RS15880	0.14	-1.3
3,568,790	-		HER17_RS15880	0.15	-0.6
3,568,926	+		HER17_RS15880	0.22	-2.1
3,568,959	-		HER17_RS15880	0.23	+0.6
3,569,035	+		HER17_RS15880	0.27	-0.4
3,569,036	-		HER17_RS15880	0.27	-0.6
3,569,098	-		HER17_RS15880	0.30	+0.4
3,569,098	-		HER17_RS15880	0.30	-0.1
3,569,174	+		HER17_RS15880	0.34	-0.9
3,569,174	+		HER17_RS15880	0.34	-1.0
3,569,174	+		HER17_RS15880	0.34	+0.2
3,569,174	+		HER17_RS15880	0.34	-0.3
3,569,229	-		HER17_RS15880	0.37	-1.0
3,569,317	+		HER17_RS15880	0.41	+0.2
3,569,318	-		HER17_RS15880	0.41	-0.6
3,569,318	-		HER17_RS15880	0.41	-0.8
3,569,318	-		HER17_RS15880	0.41	-0.9
3,569,318	-		HER17_RS15880	0.41	-0.1
3,569,396	+		HER17_RS15880	0.45	-0.6
3,569,432	-		HER17_RS15880	0.47	-1.2