Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,102,678	+		HER17_RS13855	0.72	-0.2
3,102,678	+		HER17_RS13855	0.72	-0.2
3,102,679	-		HER17_RS13855	0.72	+0.9
3,102,679	-		HER17_RS13855	0.72	+0.6
3,102,680	+		HER17_RS13855	0.72	-0.7
3,102,680	+		HER17_RS13855	0.72	-0.3
3,102,681	-		HER17_RS13855	0.73	-0.2
3,102,681	-		HER17_RS13855	0.73	+0.0
3,102,681	-		HER17_RS13855	0.73	+0.6
3,102,681	-		HER17_RS13855	0.73	+0.0
3,102,682	+		HER17_RS13855	0.73	-0.9
3,102,682	+		HER17_RS13855	0.73	+0.1
3,102,682	+		HER17_RS13855	0.73	+0.7
3,102,682	+		HER17_RS13855	0.73	-0.2
3,102,682	+		HER17_RS13855	0.73	-0.4
3,102,683	-		HER17_RS13855	0.73	-0.4
3,102,683	-		HER17_RS13855	0.73	+0.0
3,102,683	-		HER17_RS13855	0.73	+0.1
3,102,683	-		HER17_RS13855	0.73	-0.3
3,102,683	-		HER17_RS13855	0.73	-0.2
3,102,683	-		HER17_RS13855	0.73	+0.1
3,102,913	-				+0.5
3,102,913	-				+0.3
3,102,913	-				+0.4
3,103,002	-				-0.0
3,103,050	-		HER17_RS13860	0.19	+0.5
3,103,050	-		HER17_RS13860	0.19	-0.3
3,103,070	-		HER17_RS13860	0.25	+2.0
3,103,138	-		HER17_RS13860	0.48	+0.6
3,103,138	-		HER17_RS13860	0.48	+0.7
3,103,162	-		HER17_RS13860	0.56	-0.2
3,103,296	-				-0.5
3,103,301	+				-1.2
3,103,302	-				-0.3
3,103,302	-				+0.6
3,103,336	+				+0.4
3,103,372	+				+0.4
3,103,436	-				-0.0
3,103,436	-				+0.2
3,103,481	+				+0.4
3,103,481	+				+0.0
3,103,482	-				+1.0
3,103,501	+				+0.1
3,103,502	-				-0.0
3,103,502	-				+0.3
3,103,502	-				-0.4
3,103,542	+				-0.5
3,103,548	+				+0.1
3,103,548	+				+1.0
3,103,548	+				+1.0
3,103,548	+				-0.2
3,103,548	+				+0.2
3,103,549	-				-0.4
3,103,549	-				-0.0
3,103,549	-				-0.6
3,103,549	-				+0.8
3,103,549	-				+0.4
3,103,561	+				+0.6
3,103,561	+				+0.3
3,103,561	+				-0.1
3,103,605	+				-0.5
3,103,605	+				+1.0
3,103,605	+				+0.2
3,103,609	+				-0.2
3,103,631	+				+0.0
3,103,771	-		HER17_RS13865	0.28	+0.3
3,103,797	+		HER17_RS13865	0.34	+0.1
3,103,798	-		HER17_RS13865	0.34	+0.2
3,103,798	-		HER17_RS13865	0.34	+0.2
3,103,811	+		HER17_RS13865	0.37	-1.0
3,103,811	+		HER17_RS13865	0.37	+1.4
3,103,812	-		HER17_RS13865	0.37	+0.2
3,103,812	-		HER17_RS13865	0.37	-0.3
3,103,812	-		HER17_RS13865	0.37	+0.3
3,103,838	+		HER17_RS13865	0.43	-0.4
3,103,867	+		HER17_RS13865	0.49	-0.2
3,103,887	-		HER17_RS13865	0.54	+0.5
3,103,887	-		HER17_RS13865	0.54	+0.4
3,103,926	-		HER17_RS13865	0.63	-0.6
3,103,928	+		HER17_RS13865	0.63	-0.2
3,103,929	-		HER17_RS13865	0.63	+0.8
3,103,931	+		HER17_RS13865	0.64	+0.1
3,104,062	+				-0.1
3,104,062	+				+0.6
3,104,125	+				+0.6
3,104,126	-				+0.1
3,104,144	-				+0.3
3,104,157	+				-0.6
3,104,161	+				+0.4
3,104,161	+				+0.0
3,104,162	-				-0.2
3,104,189	+				-0.2
3,104,190	-				-0.3
3,104,190	-				+0.1
3,104,190	-				-0.2
3,104,190	-				-0.0
3,104,190	-				-0.2
3,104,190	-				-0.2
3,104,190	-				-0.1
3,104,190	-				-0.5
3,104,200	+				+1.4
3,104,200	+				-0.9
3,104,200	+				-0.4
3,104,201	-				-0.3
3,104,201	-				-0.8
3,104,201	-				-0.5
3,104,246	-				+0.6
3,104,270	-		HER17_RS13870	0.13	+0.4
3,104,270	-		HER17_RS13870	0.13	+0.0
3,104,429	-		HER17_RS13870	0.39	+0.7
3,104,469	-		HER17_RS13870	0.45	-0.0
3,104,469	-		HER17_RS13870	0.45	+0.3
3,104,592	+		HER17_RS13870	0.65	+0.4
3,104,592	+		HER17_RS13870	0.65	+1.0
3,104,593	-		HER17_RS13870	0.66	+0.1
3,104,694	+		HER17_RS13870	0.82	-0.4
3,104,695	-		HER17_RS13870	0.82	-1.2
3,104,695	-		HER17_RS13870	0.82	-0.5
3,104,698	+		HER17_RS13870	0.83	-0.2
3,104,732	+		HER17_RS13870	0.88	-0.6
3,104,732	+		HER17_RS13870	0.88	+0.4
3,104,733	-		HER17_RS13870	0.88	+0.2
3,104,799	-				+1.1
3,104,801	+				+0.3
3,104,801	+				-0.0
3,104,802	-				+0.3
3,104,821	+				+0.5
3,104,821	+				+1.4
3,104,864	-				+0.5
3,104,864	-				+0.2
3,104,868	+				+0.4
3,104,872	+				+0.1
3,104,872	+				-0.2
3,104,872	+				-0.0
3,104,872	+				-0.7
3,104,872	+				+0.9
3,104,873	-				-0.3
3,104,873	-				-0.9
3,104,873	-				-0.5
3,104,873	-				-0.2
3,104,873	-				+0.4
3,104,882	+				+1.3
3,104,882	+				-0.3
3,104,883	-				-0.5
3,104,933	-				+0.2
3,104,973	+				+0.2
3,104,974	-				-0.2
3,104,974	-				+0.1
3,104,986	+				-0.9
3,104,986	+				+0.2
3,104,986	+				+0.2
3,104,986	+				-0.1
3,104,986	+				+0.1
3,104,986	+				-0.2
3,104,986	+				-0.3
3,104,987	-				-0.7
3,104,987	-				-0.2
3,104,987	-				-0.0
3,104,987	-				-0.1
3,104,987	-				-0.1
3,104,987	-				-0.1
3,104,987	-				-0.4
3,105,039	+				+1.6
3,105,039	+				-0.2
3,105,043	-				+0.2