Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13120

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,913,164	-		HER17_RS13110	0.53	+0.7
2,913,176	+		HER17_RS13110	0.54	-0.1
2,913,269	+		HER17_RS13110	0.62	-0.3
2,913,343	+		HER17_RS13110	0.69	+0.4
2,913,616	-				+0.1
2,913,616	-				+0.7
2,913,616	-				+0.4
2,913,779	-		HER17_RS13115	0.30	+0.3
2,913,815	-		HER17_RS13115	0.40	-0.6
2,913,866	+		HER17_RS13115	0.55	-0.3
2,913,866	+		HER17_RS13115	0.55	-1.0
2,913,874	+		HER17_RS13115	0.57	-2.4
2,913,874	+		HER17_RS13115	0.57	+1.0
2,913,874	+		HER17_RS13115	0.57	+0.1
2,913,874	+		HER17_RS13115	0.57	+1.5
2,913,874	+		HER17_RS13115	0.57	-0.4
2,913,875	-		HER17_RS13115	0.57	-0.8
2,913,875	-		HER17_RS13115	0.57	+0.1
2,913,951	+		HER17_RS13115	0.79	+0.5
2,913,952	-		HER17_RS13115	0.79	+1.1
2,914,059	+				+0.3
2,914,062	+				-0.8
2,914,153	+		HER17_RS13120	0.12	-0.1
2,914,207	-		HER17_RS13120	0.21	+0.1
2,914,207	-		HER17_RS13120	0.21	-1.4
2,914,229	+		HER17_RS13120	0.25	-0.5
2,914,230	-		HER17_RS13120	0.25	+0.3
2,914,261	+		HER17_RS13120	0.31	-0.7
2,914,315	+		HER17_RS13120	0.40	-0.8
2,914,315	+		HER17_RS13120	0.40	+0.2
2,914,316	-		HER17_RS13120	0.40	+0.1
2,914,345	+		HER17_RS13120	0.45	+1.6
2,914,345	+		HER17_RS13120	0.45	-0.6
2,914,346	-		HER17_RS13120	0.45	+0.2
2,914,346	-		HER17_RS13120	0.45	+0.5
2,914,362	+		HER17_RS13120	0.48	+0.4
2,914,362	+		HER17_RS13120	0.48	-0.3
2,914,363	-		HER17_RS13120	0.48	-0.2
2,914,363	-		HER17_RS13120	0.48	-0.2
2,914,369	+		HER17_RS13120	0.49	+0.7
2,914,370	-		HER17_RS13120	0.49	-0.2
2,914,370	-		HER17_RS13120	0.49	-0.4
2,914,408	+		HER17_RS13120	0.56	-1.3
2,914,408	+		HER17_RS13120	0.56	-0.1
2,914,409	-		HER17_RS13120	0.56	-0.0
2,914,409	-		HER17_RS13120	0.56	+0.6
2,914,440	+		HER17_RS13120	0.62	-0.6
2,914,455	-		HER17_RS13120	0.64	+0.9
2,914,522	-		HER17_RS13120	0.76	+0.5
2,914,528	+		HER17_RS13120	0.77	+0.1
2,914,532	-		HER17_RS13120	0.77	-0.6
2,914,551	-		HER17_RS13120	0.81	+0.4
2,914,635	-				-0.3
2,914,655	+				-0.7
2,914,655	+				-0.3
2,914,663	+				-0.3
2,914,664	-				-0.1
2,914,669	+				-0.3
2,914,669	+				-0.7
2,914,669	+				-0.0
2,914,669	+				-1.0
2,914,669	+				-0.8
2,914,670	-				+0.4
2,914,670	-				-0.6
2,914,670	-				+0.1
2,914,670	-				-0.2
2,914,670	-				-0.1
2,914,672	-				+0.2
2,914,721	+				+1.1
2,914,721	+				-0.1
2,914,722	-				-0.4
2,914,722	-				+0.3
2,914,722	-				+0.2
2,914,722	-				-0.6
2,914,767	+				+0.7
2,914,767	+				-0.1
2,914,768	-				-0.2
2,914,802	+		HER17_RS13125	0.12	+0.7
2,914,803	-		HER17_RS13125	0.12	-0.7
2,914,803	-		HER17_RS13125	0.12	-0.3
2,914,887	+		HER17_RS13125	0.20	-0.6
2,915,014	-		HER17_RS13125	0.30	+1.0
2,915,025	+		HER17_RS13125	0.31	+0.5
2,915,120	+		HER17_RS13125	0.40	+0.7
2,915,121	-		HER17_RS13125	0.40	+1.0
2,915,121	-		HER17_RS13125	0.40	-0.1
2,915,194	-		HER17_RS13125	0.46	-0.0
2,915,260	+		HER17_RS13125	0.52	-0.5
2,915,273	+		HER17_RS13125	0.53	+0.7
2,915,273	+		HER17_RS13125	0.53	+0.4
2,915,273	+		HER17_RS13125	0.53	-0.2
2,915,274	-		HER17_RS13125	0.53	+0.2
2,915,274	-		HER17_RS13125	0.53	-0.7
2,915,274	-		HER17_RS13125	0.53	+0.8
2,915,274	-		HER17_RS13125	0.53	+0.7
2,915,279	+		HER17_RS13125	0.53	-0.1
2,915,365	+		HER17_RS13125	0.61	-0.2
2,915,421	+		HER17_RS13125	0.66	-0.8
2,915,568	-		HER17_RS13125	0.78	-0.3
2,915,568	-		HER17_RS13125	0.78	+0.6
2,915,584	+		HER17_RS13125	0.80	-0.7
2,915,606	+		HER17_RS13125	0.81	-0.0
2,915,614	-		HER17_RS13125	0.82	+0.8
2,915,614	-		HER17_RS13125	0.82	+0.4
2,915,614	-		HER17_RS13125	0.82	-0.0
2,915,614	-		HER17_RS13125	0.82	+0.4