Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS12555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,803,014	+				+1.1
2,803,014	+				-0.1
2,803,019	-				+1.1
2,803,019	-				+0.2
2,803,019	-				-0.3
2,803,134	+				+0.7
2,803,134	+				-0.2
2,803,134	+				-0.3
2,803,134	+				+0.6
2,803,135	-				-0.7
2,803,135	-				+1.3
2,803,135	-				+0.0
2,803,135	-				+0.3
2,803,346	-				-0.6
2,803,346	-				+0.3
2,803,469	-		HER17_RS12550	0.18	-0.1
2,803,616	+		HER17_RS12550	0.40	-0.2
2,803,616	+		HER17_RS12550	0.40	-0.1
2,803,617	-		HER17_RS12550	0.40	+0.1
2,803,702	+		HER17_RS12550	0.53	-0.3
2,803,702	+		HER17_RS12550	0.53	+0.3
2,803,757	+		HER17_RS12550	0.62	+1.1
2,803,817	+		HER17_RS12550	0.71	+0.4
2,803,829	+		HER17_RS12550	0.73	+0.7
2,803,829	+		HER17_RS12550	0.73	-1.0
2,803,829	+		HER17_RS12550	0.73	+0.2
2,803,830	-		HER17_RS12550	0.73	-0.3
2,803,830	-		HER17_RS12550	0.73	-0.0
2,803,855	+		HER17_RS12550	0.77	-1.1
2,803,938	+		HER17_RS12550	0.89	+0.1
2,803,938	+		HER17_RS12550	0.89	+0.2
2,803,939	-		HER17_RS12550	0.89	+0.3
2,803,998	+				+0.2
2,803,999	-				+0.2
2,804,246	-		HER17_RS12555	0.24	-0.1
2,804,307	+		HER17_RS12555	0.30	-0.2
2,804,440	-		HER17_RS12555	0.43	-0.6
2,804,565	+		HER17_RS12555	0.55	+0.6
2,804,566	-		HER17_RS12555	0.55	+0.4
2,804,566	-		HER17_RS12555	0.55	-0.4
2,804,570	-		HER17_RS12555	0.56	+0.2
2,804,755	+		HER17_RS12555	0.74	+0.2
2,804,756	-		HER17_RS12555	0.74	+0.1
2,804,756	-		HER17_RS12555	0.74	+0.1
2,804,999	-				+0.1
2,805,007	+				-0.6
2,805,008	-				+0.1
2,805,064	+				+0.6
2,805,065	-				+1.0
2,805,081	-				+0.0
2,805,088	-				-0.4
2,805,090	-				+0.2
2,805,102	-				-0.6
2,805,158	+				+0.5
2,805,158	+				+1.0
2,805,158	+				-0.4
2,805,191	+		HER17_RS12560	0.11	-0.2
2,805,192	-		HER17_RS12560	0.11	-0.8
2,805,192	-		HER17_RS12560	0.11	+0.1
2,805,219	+		HER17_RS12560	0.14	+0.0
2,805,265	-		HER17_RS12560	0.20	-0.5
2,805,265	-		HER17_RS12560	0.20	+0.1
2,805,268	-		HER17_RS12560	0.20	-0.3
2,805,439	-		HER17_RS12560	0.40	+0.3
2,805,439	-		HER17_RS12560	0.40	+1.0
2,805,541	-		HER17_RS12560	0.52	-0.1
2,805,677	+		HER17_RS12560	0.68	+0.4
2,805,684	+		HER17_RS12560	0.69	+0.4
2,805,684	+		HER17_RS12560	0.69	-0.1
2,805,684	+		HER17_RS12560	0.69	+0.0
2,805,684	+		HER17_RS12560	0.69	+0.5
2,805,684	+		HER17_RS12560	0.69	+0.3
2,805,684	+		HER17_RS12560	0.69	+0.1
2,805,685	-		HER17_RS12560	0.69	+1.2
2,805,685	-		HER17_RS12560	0.69	-0.3
2,805,685	-		HER17_RS12560	0.69	+0.4
2,805,708	+		HER17_RS12560	0.72	+0.3
2,805,708	+		HER17_RS12560	0.72	+0.3
2,805,743	+		HER17_RS12560	0.76	+0.2
2,805,743	+		HER17_RS12560	0.76	+0.2
2,805,743	+		HER17_RS12560	0.76	-0.7
2,805,744	-		HER17_RS12560	0.76	-0.8
2,805,970	-				-1.4
2,805,986	+				+0.6
2,805,987	-				-0.9
2,806,001	-				+0.6