Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11985

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,661,384	+		HER17_RS11980	0.46	+0.2
2,661,569	+		HER17_RS11980	0.60	+0.1
2,661,627	+		HER17_RS11980	0.65	+0.2
2,661,782	+		HER17_RS11980	0.78	-0.0
2,661,838	-		HER17_RS11980	0.82	+0.8
2,661,846	-		HER17_RS11980	0.83	-0.0
2,661,846	-		HER17_RS11980	0.83	+0.2
2,661,875	+		HER17_RS11980	0.85	-0.1
2,661,907	-		HER17_RS11980	0.88	-0.4
2,661,984	-				-0.4
2,662,014	+				-0.1
2,662,026	+				+0.5
2,662,061	+				-1.7
2,662,061	+				-0.4
2,662,061	+				-0.1
2,662,061	+				-0.2
2,662,061	+				+0.3
2,662,061	+				+0.3
2,662,061	+				-0.3
2,662,062	-				+0.8
2,662,062	-				-0.3
2,662,063	+				-1.4
2,662,063	+				-0.1
2,662,063	+				+0.1
2,662,063	+				+0.7
2,662,063	+				+0.2
2,662,063	+				-1.7
2,662,064	-				+0.3
2,662,064	-				+1.5
2,662,094	+				-0.2
2,662,182	+				+0.5
2,662,183	-				-0.1
2,662,194	+				-0.1
2,662,194	+				+0.7
2,662,195	-				-0.2
2,662,195	-				-0.0
2,662,195	-				-0.8
2,662,199	+				+1.1
2,662,199	+				+0.1
2,662,240	-				-1.4
2,662,297	+				-0.2
2,662,316	+				+0.7
2,662,316	+				+0.9
2,662,328	+				-0.1
2,662,328	+				-0.3
2,662,355	-				-0.2
2,662,435	-				-0.8
2,662,549	-		HER17_RS11985	0.10	+0.2
2,662,567	+		HER17_RS11985	0.11	-1.5
2,662,572	+		HER17_RS11985	0.11	-0.2
2,662,573	-		HER17_RS11985	0.11	+0.6
2,662,573	-		HER17_RS11985	0.11	-0.1
2,662,573	-		HER17_RS11985	0.11	-0.8
2,662,693	+		HER17_RS11985	0.18	+0.1
2,662,693	+		HER17_RS11985	0.18	-1.1
2,662,693	+		HER17_RS11985	0.18	+0.8
2,662,694	-		HER17_RS11985	0.18	-0.0
2,662,697	-		HER17_RS11985	0.18	+0.6
2,662,807	+		HER17_RS11985	0.24	-0.5
2,662,997	-		HER17_RS11985	0.33	+0.8
2,663,069	+		HER17_RS11985	0.37	+0.7
2,663,069	+		HER17_RS11985	0.37	+0.2
2,663,069	+		HER17_RS11985	0.37	-0.6
2,663,070	-		HER17_RS11985	0.37	-0.0
2,663,070	-		HER17_RS11985	0.37	+0.1
2,663,108	-		HER17_RS11985	0.39	+0.2
2,663,126	+		HER17_RS11985	0.40	-0.7
2,663,179	-		HER17_RS11985	0.43	-0.1
2,663,265	+		HER17_RS11985	0.47	+0.3
2,663,266	-		HER17_RS11985	0.47	+0.7
2,663,266	-		HER17_RS11985	0.47	+0.3
2,663,302	+		HER17_RS11985	0.49	+0.7
2,663,302	+		HER17_RS11985	0.49	+0.5
2,663,302	+		HER17_RS11985	0.49	+0.3
2,663,302	+		HER17_RS11985	0.49	-0.1
2,663,302	+		HER17_RS11985	0.49	+0.8
2,663,302	+		HER17_RS11985	0.49	+0.3
2,663,303	-		HER17_RS11985	0.49	-0.5
2,663,303	-		HER17_RS11985	0.49	+0.5
2,663,303	-		HER17_RS11985	0.49	-0.6
2,663,303	-		HER17_RS11985	0.49	+0.2
2,663,493	+		HER17_RS11985	0.59	-0.8
2,663,560	+		HER17_RS11985	0.63	-0.2
2,663,561	-		HER17_RS11985	0.63	+0.9
2,663,564	+		HER17_RS11985	0.63	-2.5
2,663,569	+		HER17_RS11985	0.63	-0.1
2,663,569	+		HER17_RS11985	0.63	+0.0
2,663,658	-		HER17_RS11985	0.68	-0.9
2,663,663	+		HER17_RS11985	0.68	+0.6
2,663,663	+		HER17_RS11985	0.68	-0.4
2,664,097	+				+0.2
2,664,097	+				-1.3
2,664,098	-				-0.1
2,664,098	-				+0.4
2,664,098	-				+0.7
2,664,104	+				+0.6
2,664,105	-				-0.6
2,664,435	-				-0.1
2,664,596	+		HER17_RS11990	0.15	-0.1
2,664,597	-		HER17_RS11990	0.15	+0.4
2,664,601	-		HER17_RS11990	0.15	-0.1
2,664,601	-		HER17_RS11990	0.15	-0.5
2,664,601	-		HER17_RS11990	0.15	-0.3
2,664,601	-		HER17_RS11990	0.15	+1.6
2,664,601	-		HER17_RS11990	0.15	-0.6
2,664,688	+		HER17_RS11990	0.19	+0.1
2,664,688	+		HER17_RS11990	0.19	+0.3
2,664,689	-		HER17_RS11990	0.19	+0.1
2,664,689	-		HER17_RS11990	0.19	-0.3
2,664,692	+		HER17_RS11990	0.19	+0.5
2,664,693	-		HER17_RS11990	0.19	-0.1
2,664,693	-		HER17_RS11990	0.19	-1.4
2,664,701	+		HER17_RS11990	0.20	+0.1
2,664,701	+		HER17_RS11990	0.20	-0.1
2,664,840	+		HER17_RS11990	0.26	-0.5
2,664,857	-		HER17_RS11990	0.27	+0.1
2,665,075	+		HER17_RS11990	0.37	+0.1
2,665,076	-		HER17_RS11990	0.37	+0.2
2,665,083	+		HER17_RS11990	0.38	+0.0
2,665,121	+		HER17_RS11990	0.39	+0.2
2,665,121	+		HER17_RS11990	0.39	+0.1
2,665,122	-		HER17_RS11990	0.40	+1.6
2,665,122	-		HER17_RS11990	0.40	-0.2
2,665,124	-		HER17_RS11990	0.40	+0.4
2,665,124	-		HER17_RS11990	0.40	-0.1
2,665,124	-		HER17_RS11990	0.40	+0.5
2,665,124	-		HER17_RS11990	0.40	-0.4
2,665,124	-		HER17_RS11990	0.40	+0.4
2,665,144	+		HER17_RS11990	0.41	+0.6
2,665,144	+		HER17_RS11990	0.41	-0.5
2,665,145	-		HER17_RS11990	0.41	-0.4
2,665,145	-		HER17_RS11990	0.41	+1.0
2,665,145	-		HER17_RS11990	0.41	-0.2