Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11530

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,560,446	+		HER17_RS11525	0.38	+1.6
2,560,446	+		HER17_RS11525	0.38	+0.4
2,560,447	-		HER17_RS11525	0.38	-0.3
2,560,448	+		HER17_RS11525	0.38	+0.3
2,560,448	+		HER17_RS11525	0.38	-0.4
2,560,448	+		HER17_RS11525	0.38	-0.2
2,560,448	+		HER17_RS11525	0.38	+0.4
2,560,449	-		HER17_RS11525	0.38	+0.6
2,560,449	-		HER17_RS11525	0.38	+0.2
2,560,449	-		HER17_RS11525	0.38	+0.3
2,560,449	-		HER17_RS11525	0.38	+0.0
2,560,549	+		HER17_RS11525	0.45	+1.5
2,560,728	+		HER17_RS11525	0.58	+0.5
2,560,733	+		HER17_RS11525	0.59	-0.4
2,560,875	-		HER17_RS11525	0.69	+0.2
2,560,937	-		HER17_RS11525	0.73	-0.3
2,560,945	+		HER17_RS11525	0.74	+0.6
2,560,945	+		HER17_RS11525	0.74	+0.4
2,560,946	-		HER17_RS11525	0.74	-0.0
2,560,986	-		HER17_RS11525	0.77	+0.3
2,560,986	-		HER17_RS11525	0.77	+1.0
2,560,999	+		HER17_RS11525	0.78	-0.1
2,561,038	+		HER17_RS11525	0.80	-0.1
2,561,042	+		HER17_RS11525	0.81	+0.0
2,561,045	-		HER17_RS11525	0.81	-0.2
2,561,045	-		HER17_RS11525	0.81	+0.5
2,561,057	+		HER17_RS11525	0.82	+0.7
2,561,058	-		HER17_RS11525	0.82	-1.0
2,561,149	-		HER17_RS11525	0.88	+0.7
2,561,204	+				-0.8
2,561,237	+				-0.1
2,561,238	-				-0.4
2,561,289	+				-1.6
2,561,290	-				-0.1
2,561,290	-				+0.0
2,561,333	-				-0.7
2,561,349	+				-0.2
2,561,349	+				-0.4
2,561,350	-				-0.5
2,561,352	-				+0.4
2,561,390	+				-0.0
2,561,407	-				-0.8
2,561,651	-		HER17_RS11530	0.80	-0.6
2,561,693	-				+0.5
2,561,693	-				-0.7
2,561,695	+				+0.3
2,561,695	+				+0.4
2,561,716	+				-0.9
2,561,716	+				-0.3
2,561,716	+				+0.0
2,561,716	+				+0.9
2,561,716	+				-0.8
2,561,717	-				-1.4
2,561,717	-				-1.3
2,561,717	-				+1.0
2,561,717	-				-0.0
2,561,717	-				+0.8
2,561,726	+				+0.1
2,561,726	+				-0.0
2,561,736	-				+0.2
2,561,736	-				+0.3
2,561,736	-				+1.2
2,561,751	+				-0.1
2,561,752	-				+0.6
2,561,765	-				-1.8
2,561,827	-				-0.2
2,561,879	+				+0.2
2,562,209	-		HER17_RS11535	0.41	-2.1
2,562,282	+		HER17_RS11535	0.50	-1.4
2,562,283	-		HER17_RS11535	0.50	-1.8
2,562,287	-		HER17_RS11535	0.50	-2.4
2,562,298	-		HER17_RS11535	0.52	-0.2
2,562,396	-		HER17_RS11535	0.64	-3.4
2,562,502	-		HER17_RS11535	0.78	-0.8
2,562,502	-		HER17_RS11535	0.78	-2.4
2,562,581	-		HER17_RS11535	0.88	-1.4
2,562,602	+				-1.0
2,562,603	-				-0.1