Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10905

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,434,780	-		HER17_RS10900	0.19	-1.1
2,434,780	-		HER17_RS10900	0.19	-1.1
2,434,841	-		HER17_RS10900	0.26	+0.4
2,434,943	-		HER17_RS10900	0.38	-0.3
2,434,944	+		HER17_RS10900	0.38	-1.2
2,434,944	+		HER17_RS10900	0.38	-1.0
2,434,945	-		HER17_RS10900	0.38	+0.5
2,434,945	-		HER17_RS10900	0.38	-0.6
2,435,076	+		HER17_RS10900	0.53	-0.4
2,435,249	-		HER17_RS10900	0.72	-1.7
2,435,275	+		HER17_RS10900	0.75	+1.1
2,435,277	+		HER17_RS10900	0.75	-2.2
2,435,277	+		HER17_RS10900	0.75	+0.8
2,435,280	+		HER17_RS10900	0.76	-3.3
2,435,281	-		HER17_RS10900	0.76	-1.5
2,435,281	-		HER17_RS10900	0.76	-1.0
2,435,281	-		HER17_RS10900	0.76	-0.8
2,435,396	-		HER17_RS10900	0.89	+0.3
2,435,428	+				-0.1
2,435,428	+				-0.3
2,435,506	+				+0.6
2,435,621	-				-0.2
2,435,644	-				-0.3
2,435,675	+				-1.2
2,435,675	+				+1.0
2,436,006	-		HER17_RS10905	0.53	-0.3
2,436,006	-		HER17_RS10905	0.53	-0.3
2,436,048	+		HER17_RS10905	0.60	-0.8
2,436,062	+		HER17_RS10905	0.62	+0.1
2,436,063	-		HER17_RS10905	0.63	-0.1
2,436,277	-				-2.2
2,436,278	+				+1.2
2,436,301	-				+1.4
2,436,307	+				-0.5
2,436,308	-				-0.4
2,436,308	-				+0.2
2,436,364	+				-0.1
2,436,368	-				-0.3
2,436,368	-				-0.2
2,436,368	-				-0.4
2,436,369	+				+0.2
2,436,369	+				+0.5
2,436,369	+				+0.3
2,436,370	-				+0.2
2,436,396	+				+0.2
2,436,396	+				+0.7
2,436,409	-				-1.2
2,436,590	-		HER17_RS10910	0.17	-0.4
2,436,859	-		HER17_RS10910	0.48	-0.2
2,437,048	+		HER17_RS10910	0.69	-0.5
2,437,048	+		HER17_RS10910	0.69	-0.5
2,437,049	-		HER17_RS10910	0.69	+0.3
2,437,252	+				-0.3
2,437,252	+				+0.3
2,437,253	-				-0.2
2,437,269	+				-1.2