Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,427,487	-		HER17_RS10870	0.39	+0.5
2,427,488	+		HER17_RS10870	0.39	-0.5
2,427,489	-		HER17_RS10870	0.40	+1.0
2,427,563	-		HER17_RS10870	0.47	+0.4
2,427,566	-		HER17_RS10870	0.47	-2.2
2,427,742	-		HER17_RS10870	0.66	+0.6
2,427,791	+		HER17_RS10870	0.71	+1.0
2,427,792	-		HER17_RS10870	0.71	-1.0
2,427,816	+		HER17_RS10870	0.73	+0.1
2,427,816	+		HER17_RS10870	0.73	+0.6
2,427,816	+		HER17_RS10870	0.73	-0.1
2,427,817	-		HER17_RS10870	0.73	+0.6
2,427,817	-		HER17_RS10870	0.73	-0.1
2,427,817	-		HER17_RS10870	0.73	-1.6
2,427,817	-		HER17_RS10870	0.73	+0.3
2,427,817	-		HER17_RS10870	0.73	+0.6
2,427,817	-		HER17_RS10870	0.73	-2.5
2,427,998	+				+0.8
2,427,998	+				+0.0
2,427,999	-				+0.2
2,428,021	+				+1.0
2,428,021	+				+0.4
2,428,021	+				+0.2
2,428,022	-				+0.5
2,428,022	-				-0.1
2,428,054	-				+0.0
2,428,055	+				+0.2
2,428,056	-				+0.4
2,428,056	-				-0.6
2,428,078	-				-0.8
2,428,144	+				-0.3
2,428,201	+				+0.1
2,428,222	+				-0.0
2,428,262	+				-0.8
2,428,284	-				-0.9
2,428,408	-				-0.1
2,428,418	+				-1.2
2,428,418	+				+0.7
2,428,418	+				+0.0
2,428,419	-				+0.4
2,428,419	-				+0.0
2,428,425	-				+0.3
2,428,459	-				+0.3
2,428,540	-				-1.5
2,428,540	-				-0.5
2,428,703	-				-1.5
2,431,150	-				-1.1
2,431,156	+				-2.4
2,431,157	-				-0.5
2,431,175	+				-1.6
2,431,175	+				-2.1
2,431,180	-				-0.7
2,431,180	-				-0.1
2,431,180	-				+0.5
2,431,180	-				-0.9
2,431,180	-				-0.0
2,431,232	-				+0.2
2,431,246	+				-0.6
2,431,247	-				+0.2
2,431,262	+				+0.2
2,431,262	+				+0.1
2,431,274	+				+0.3
2,431,275	-				-0.1
2,431,366	+				-0.7
2,431,367	-				-0.5
2,431,378	+				-0.5
2,431,378	+				+0.4
2,431,378	+				+0.8
2,431,378	+				+0.1
2,431,378	+				+0.2
2,431,379	-				-2.0
2,431,379	-				+0.2
2,431,380	+				+0.0
2,431,380	+				+0.0
2,431,380	+				-0.4
2,431,381	-				-0.2
2,431,381	-				-0.2
2,431,381	-				-1.0
2,431,381	-				+0.6
2,431,381	-				-0.2
2,431,411	-				+1.1
2,431,411	-				-0.8
2,431,418	+				+0.2
2,431,418	+				+0.2
2,431,419	-				+0.1
2,431,485	-		HER17_RS10880	0.22	+0.4
2,431,498	-		HER17_RS10880	0.27	-1.0
2,431,522	+		HER17_RS10880	0.36	+0.2
2,431,523	-		HER17_RS10880	0.36	-1.0
2,431,546	-		HER17_RS10880	0.44	-2.0
2,431,551	-		HER17_RS10880	0.46	-2.6
2,431,551	-		HER17_RS10880	0.46	-1.1
2,431,551	-		HER17_RS10880	0.46	+0.2
2,431,568	+		HER17_RS10880	0.53	-0.5
2,431,619	+		HER17_RS10880	0.71	-0.0
2,431,634	+		HER17_RS10880	0.77	-1.4
2,431,733	+				-0.5
2,431,741	-				-0.4
2,431,743	+				+0.0
2,431,744	-				-1.1
2,431,744	-				-0.2
2,431,744	-				+1.1
2,431,849	+				-0.6
2,431,850	-				+0.2
2,431,850	-				-0.1
2,431,850	-				-0.6
2,431,850	-				+0.8
2,431,859	-		HER17_RS10885	0.10	-1.3
2,431,860	+		HER17_RS10885	0.10	-0.8
2,431,875	-		HER17_RS10885	0.12	-0.8