Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS04585

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,040,236	+		HER17_RS04575	0.84	+0.0
1,040,280	+		HER17_RS04575	0.88	+0.1
1,040,285	-		HER17_RS04575	0.88	+0.4
1,040,319	+				-1.0
1,040,320	-				-0.2
1,040,448	-				+1.6
1,040,448	-				-0.5
1,040,448	-				+0.1
1,040,460	+				-2.5
1,040,460	+				+0.2
1,040,460	+				-1.5
1,040,460	+				+0.4
1,040,461	-				+0.3
1,040,462	+				-1.3
1,040,462	+				+0.3
1,040,462	+				-0.1
1,040,462	+				-0.5
1,040,462	+				-0.5
1,040,462	+				-1.7
1,040,463	-				+0.6
1,040,463	-				+0.7
1,040,463	-				-0.3
1,040,473	+				-0.3
1,040,522	+				-1.6
1,040,522	+				+0.0
1,040,522	+				-0.3
1,040,523	-				+0.1
1,040,523	-				-0.7
1,040,523	-				-0.2
1,040,526	+				-0.5
1,040,526	+				+0.6
1,040,527	-				-1.9
1,040,527	-				-0.2
1,040,529	+				+0.6
1,040,529	+				+0.3
1,040,529	+				-0.3
1,040,529	+				-3.1
1,040,529	+				+0.3
1,040,530	-				+1.3
1,040,530	-				-1.4
1,040,536	+				+0.1
1,040,536	+				+0.1
1,040,536	+				-0.8
1,040,565	-				-0.2
1,040,697	+		HER17_RS04580	0.14	-0.2
1,040,697	+		HER17_RS04580	0.14	-0.6
1,040,698	-		HER17_RS04580	0.14	-0.2
1,040,751	+		HER17_RS04580	0.23	+0.3
1,040,752	-		HER17_RS04580	0.23	-0.5
1,040,848	-		HER17_RS04580	0.38	-2.5
1,040,893	-		HER17_RS04580	0.46	-0.3
1,041,070	+		HER17_RS04580	0.74	+0.1
1,041,124	+		HER17_RS04580	0.83	-0.4
1,041,300	+		HER17_RS04585	0.11	-0.2
1,041,341	+		HER17_RS04585	0.17	-1.4
1,041,341	+		HER17_RS04585	0.17	+0.0
1,041,440	+		HER17_RS04585	0.31	-0.2
1,041,441	-		HER17_RS04585	0.31	-0.5
1,041,455	+		HER17_RS04585	0.33	+0.2
1,041,456	-		HER17_RS04585	0.33	+1.2
1,041,456	-		HER17_RS04585	0.33	+0.4
1,041,456	-		HER17_RS04585	0.33	-0.2
1,041,488	+		HER17_RS04585	0.38	-0.2
1,041,534	+		HER17_RS04585	0.45	+1.6
1,041,534	+		HER17_RS04585	0.45	+0.1
1,041,535	-		HER17_RS04585	0.45	-0.2
1,041,588	+		HER17_RS04585	0.53	+0.0
1,041,588	+		HER17_RS04585	0.53	+0.1
1,041,589	-		HER17_RS04585	0.53	+1.1
1,041,589	-		HER17_RS04585	0.53	-0.3
1,041,589	-		HER17_RS04585	0.53	-0.7
1,041,594	+		HER17_RS04585	0.53	-0.2
1,041,594	+		HER17_RS04585	0.53	-0.1
1,041,594	+		HER17_RS04585	0.53	+0.1
1,041,595	-		HER17_RS04585	0.54	+0.2
1,041,595	-		HER17_RS04585	0.54	-0.7
1,041,745	+		HER17_RS04585	0.75	+1.5
1,041,831	-		HER17_RS04585	0.88	-0.2
1,041,831	-		HER17_RS04585	0.88	-2.4
1,041,831	-		HER17_RS04585	0.88	+0.4
1,041,853	+				+0.5
1,041,853	+				-0.2
1,042,176	+		HER17_RS04590	0.49	+0.0
1,042,192	-		HER17_RS04590	0.51	+0.5
1,042,192	-		HER17_RS04590	0.51	-0.7
1,042,455	-				+0.0
1,042,470	-				-0.5
1,042,478	-				-0.2
1,042,499	+				+0.5
1,042,499	+				-0.5
1,042,510	+				-0.5
1,042,510	+				-0.0
1,042,510	+				+0.9
1,042,510	+				-0.7
1,042,510	+				-0.1
1,042,511	-				+0.4
1,042,511	-				+0.1
1,042,511	-				+0.2
1,042,511	-				+0.5
1,042,511	-				-0.3
1,042,511	-				-2.3
1,042,511	-				+0.1
1,042,521	+				-0.8
1,042,521	+				-0.1
1,042,522	-				+1.0
1,042,522	-				+0.7
1,042,522	-				+0.3
1,042,536	+				-0.1
1,042,537	-				+0.3
1,042,537	-				+0.6
1,042,537	-				-0.6
1,042,574	-				+0.5
1,042,586	-				-0.1
1,042,596	+				-1.3
1,042,599	+				-0.5
1,042,623	-				-0.0
1,042,639	+				-0.6
1,042,639	+				+0.5
1,042,787	+				+0.4
1,042,788	-				+0.2
1,042,874	-				+0.4