Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21610

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,843,219	+		HER17_RS21605	0.52	-0.4
4,843,232	-		HER17_RS21605	0.54	+0.4
4,843,232	-		HER17_RS21605	0.54	+0.2
4,843,232	-		HER17_RS21605	0.54	-0.5
4,843,248	-		HER17_RS21605	0.57	-0.2
4,843,303	+		HER17_RS21605	0.65	+0.5
4,843,304	-		HER17_RS21605	0.66	-0.5
4,843,304	-		HER17_RS21605	0.66	+0.2
4,843,340	+		HER17_RS21605	0.71	-0.1
4,843,340	+		HER17_RS21605	0.71	-0.3
4,843,340	+		HER17_RS21605	0.71	+0.2
4,843,341	-		HER17_RS21605	0.71	-0.0
4,843,341	-		HER17_RS21605	0.71	-0.3
4,843,349	+		HER17_RS21605	0.73	+0.3
4,843,349	+		HER17_RS21605	0.73	-0.9
4,843,349	+		HER17_RS21605	0.73	-0.4
4,843,349	+		HER17_RS21605	0.73	+0.6
4,843,350	-		HER17_RS21605	0.73	-0.6
4,843,350	-		HER17_RS21605	0.73	-0.5
4,843,350	-		HER17_RS21605	0.73	+0.0
4,843,383	+		HER17_RS21605	0.78	-0.5
4,843,384	-		HER17_RS21605	0.78	-0.3
4,843,384	-		HER17_RS21605	0.78	-0.7
4,843,390	+		HER17_RS21605	0.79	-0.6
4,843,400	-		HER17_RS21605	0.81	-0.7
4,843,400	-		HER17_RS21605	0.81	-3.2
4,843,441	+		HER17_RS21605	0.88	+1.4
4,843,441	+		HER17_RS21605	0.88	+0.7
4,843,441	+		HER17_RS21605	0.88	+0.4
4,843,441	+		HER17_RS21605	0.88	-0.8
4,843,441	+		HER17_RS21605	0.88	-0.1
4,843,441	+		HER17_RS21605	0.88	-0.5
4,843,442	-		HER17_RS21605	0.88	-0.5
4,843,442	-		HER17_RS21605	0.88	-0.4
4,843,442	-		HER17_RS21605	0.88	-0.2
4,843,444	+		HER17_RS21605	0.88	+0.8
4,843,445	-		HER17_RS21605	0.88	-0.1
4,843,445	-		HER17_RS21605	0.88	+0.1
4,843,477	+				-0.2
4,843,478	-				-0.6
4,843,506	-				+0.5
4,843,542	+				+0.3
4,843,543	-				+0.7
4,843,546	+				-0.6
4,843,546	+				-0.9
4,843,577	+				-1.1
4,843,666	+				+1.2
4,843,669	+				-0.7
4,843,878	+				+0.2
4,843,919	+				-0.4
4,843,920	-				-0.5
4,843,920	-				+0.1
4,843,958	+				-0.2
4,843,991	+				-0.5
4,844,010	+				-0.0
4,844,033	+				-0.3
4,844,080	+				-1.1
4,844,080	+				-0.8
4,844,094	+				+0.3
4,844,108	+				+0.5
4,844,148	+				+1.0
4,844,148	+				-0.6
4,844,156	+				+0.0
4,844,190	+		HER17_RS21610	0.13	+0.4
4,844,190	+		HER17_RS21610	0.13	+0.4
4,844,196	+		HER17_RS21610	0.14	-0.7
4,844,196	+		HER17_RS21610	0.14	+0.4
4,844,236	+		HER17_RS21610	0.25	+0.8
4,844,388	+		HER17_RS21610	0.64	-0.6
4,844,388	+		HER17_RS21610	0.64	-0.3
4,844,392	+		HER17_RS21610	0.65	-1.0
4,844,392	+		HER17_RS21610	0.65	+0.1
4,844,462	+		HER17_RS21610	0.84	-0.8
4,844,462	+		HER17_RS21610	0.84	+1.1
4,844,462	+		HER17_RS21610	0.84	+0.2
4,844,506	+				-0.3
4,844,522	+				-2.1