Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,491,179	-		HER17_RS19990	0.19	-1.8
4,491,179	-		HER17_RS19990	0.19	-1.2
4,491,253	+		HER17_RS19990	0.26	-2.7
4,491,312	-		HER17_RS19990	0.31	-2.1
4,491,397	-		HER17_RS19990	0.39	-3.3
4,491,409	+		HER17_RS19990	0.40	-3.7
4,491,409	+		HER17_RS19990	0.40	-2.5
4,491,410	-		HER17_RS19990	0.40	-2.4
4,491,452	+		HER17_RS19990	0.44	-1.8
4,491,453	-		HER17_RS19990	0.44	-1.6
4,491,453	-		HER17_RS19990	0.44	-2.9
4,491,454	+		HER17_RS19990	0.44	-3.6
4,491,455	-		HER17_RS19990	0.44	-1.9
4,491,519	-		HER17_RS19990	0.50	-1.6
4,491,519	-		HER17_RS19990	0.50	-1.9
4,491,519	-		HER17_RS19990	0.50	-3.2
4,491,611	-		HER17_RS19990	0.58	-2.6
4,491,634	+		HER17_RS19990	0.60	-2.6
4,491,634	+		HER17_RS19990	0.60	-1.9
4,491,637	+		HER17_RS19990	0.61	-3.3
4,491,638	-		HER17_RS19990	0.61	-2.2
4,491,652	+		HER17_RS19990	0.62	-1.5
4,491,686	-		HER17_RS19990	0.65	-1.3
4,491,720	+		HER17_RS19990	0.68	-1.8
4,491,721	-		HER17_RS19990	0.68	-2.6
4,491,762	-		HER17_RS19990	0.72	-1.9
4,491,763	+		HER17_RS19990	0.72	-2.5
4,491,794	-		HER17_RS19990	0.75	-1.1
4,491,949	+		HER17_RS19990	0.89	-3.3
4,492,019	-				-2.1
4,492,075	+				+0.5
4,492,075	+				-0.4
4,492,075	+				+0.3
4,492,075	+				-0.5
4,492,075	+				+0.1
4,492,075	+				-0.6
4,492,075	+				-0.0
4,492,076	-				+0.8
4,492,076	-				-0.6
4,492,076	-				+1.0
4,492,076	-				-0.3
4,492,077	+				-0.3
4,492,077	+				+0.1
4,492,077	+				-0.0
4,492,077	+				+1.1
4,492,077	+				-0.6
4,492,077	+				+1.0
4,492,077	+				-2.2
4,492,078	-				-0.0
4,492,078	-				+0.5
4,492,078	-				+0.2
4,492,078	-				-0.2
4,492,078	-				-1.6
4,492,078	-				-0.5
4,492,109	-				+1.0
4,492,150	-				+0.5
4,492,150	-				+0.2
4,492,150	-				+0.1
4,492,150	-				-0.0
4,492,150	-				+0.6
4,492,150	-				-0.3
4,492,150	-				+0.3
4,492,150	-				-0.4
4,492,153	+				-0.2
4,492,153	+				-0.2
4,492,168	+				-0.2
4,492,168	+				-0.7
4,492,168	+				-0.1
4,493,452	-				+0.4
4,493,509	-				+0.6
4,493,509	-				+0.4
4,493,512	-				-1.5
4,493,512	-				-0.2
4,493,512	-				+0.4
4,493,512	-				+1.3
4,493,516	-				-0.4
4,493,559	-		HER17_RS20000	0.18	-1.1
4,493,559	-		HER17_RS20000	0.18	+0.1
4,493,559	-		HER17_RS20000	0.18	+0.0
4,493,559	-		HER17_RS20000	0.18	+0.8
4,493,561	-		HER17_RS20000	0.18	-0.2
4,493,561	-		HER17_RS20000	0.18	-0.8
4,493,561	-		HER17_RS20000	0.18	-1.7
4,493,586	-		HER17_RS20000	0.28	-1.1
4,493,603	-		HER17_RS20000	0.35	-0.1
4,493,783	-				-0.1
4,493,783	-				+0.2
4,493,783	-				-0.1
4,493,783	-				+0.2
4,493,783	-				-0.3
4,493,813	-				+0.6
4,493,813	-				+0.6
4,493,813	-				+0.5
4,493,818	-				-0.2
4,493,818	-				-0.4
4,493,818	-				-0.1
4,493,818	-				-0.5
4,493,825	+				-2.1
4,493,826	-				-0.7
4,493,826	-				+0.2
4,493,826	-				+0.1
4,493,839	-				+0.1
4,493,849	+				-0.5
4,493,849	+				+0.4
4,493,849	+				+0.7
4,493,849	+				+0.3
4,493,870	+				-1.8
4,493,981	+		HER17_RS20005	0.27	+0.7
4,493,982	-		HER17_RS20005	0.27	+0.5
4,494,010	-		HER17_RS20005	0.37	+0.1
4,494,054	-		HER17_RS20005	0.52	+0.4
4,494,073	+		HER17_RS20005	0.58	+0.5
4,494,073	+		HER17_RS20005	0.58	+0.1
4,494,074	-		HER17_RS20005	0.59	-0.0
4,494,326	+		HER17_RS20010	0.19	-0.0
4,494,326	+		HER17_RS20010	0.19	-0.2
4,494,327	-		HER17_RS20010	0.19	-0.9
4,494,383	+		HER17_RS20010	0.28	-0.8
4,494,383	+		HER17_RS20010	0.28	-0.4
4,494,384	-		HER17_RS20010	0.28	+0.5
4,494,384	-		HER17_RS20010	0.28	+0.2