Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19980

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,487,889	-		HER17_RS19975	0.40	-0.1
4,487,889	-		HER17_RS19975	0.40	+0.4
4,487,921	+		HER17_RS19975	0.43	+0.5
4,487,943	+		HER17_RS19975	0.44	-2.1
4,487,943	+		HER17_RS19975	0.44	-0.1
4,487,944	-		HER17_RS19975	0.45	+0.4
4,487,957	+		HER17_RS19975	0.46	-0.4
4,487,957	+		HER17_RS19975	0.46	-1.3
4,487,957	+		HER17_RS19975	0.46	-0.0
4,487,964	+		HER17_RS19975	0.46	-0.3
4,487,964	+		HER17_RS19975	0.46	-0.1
4,487,965	-		HER17_RS19975	0.46	+0.1
4,488,033	+		HER17_RS19975	0.52	-0.8
4,488,234	+		HER17_RS19975	0.70	-0.3
4,488,335	+		HER17_RS19975	0.78	-1.0
4,488,335	+		HER17_RS19975	0.78	-0.8
4,488,335	+		HER17_RS19975	0.78	-1.5
4,488,336	-		HER17_RS19975	0.79	+0.2
4,488,336	-		HER17_RS19975	0.79	-0.2
4,488,336	-		HER17_RS19975	0.79	-1.3
4,488,369	+		HER17_RS19975	0.81	-0.5
4,488,369	+		HER17_RS19975	0.81	-0.3
4,488,445	+		HER17_RS19975	0.88	+0.2
4,488,507	-				-0.2
4,488,582	+				-0.0
4,488,642	+				-0.1
4,488,663	-				-0.5
4,488,663	-				+0.2
4,488,683	+				-0.1
4,488,712	-				+0.2
4,488,745	+				+0.0
4,488,745	+				-0.3
4,488,746	-				-0.8
4,488,746	-				-0.5
4,488,752	+				-1.2
4,488,752	+				+0.5
4,488,754	+				-0.4
4,488,754	+				-0.1
4,488,754	+				-0.6
4,488,754	+				+0.1
4,488,755	-				-0.8
4,488,757	+				-1.4
4,488,757	+				-0.0
4,488,757	+				+0.5
4,488,757	+				+0.6
4,488,831	+				-1.6
4,489,205	+				-0.9
4,489,206	-				-0.2
4,489,262	+				-0.4
4,489,262	+				+0.4
4,489,263	-				-0.1
4,489,263	-				-0.6
4,489,263	-				+0.8
4,489,280	-				+0.7
4,489,280	-				+0.5
4,489,280	-				+0.4
4,489,285	+				+1.2
4,489,286	-				-0.1
4,489,325	+				-0.2
4,489,331	-				-1.1
4,489,336	+				+0.1
4,489,340	+				+0.5
4,489,340	+				-0.0
4,489,340	+				-0.1
4,489,340	+				+0.6
4,489,340	+				-0.4
4,489,340	+				-0.2
4,489,341	-				-0.6
4,489,341	-				-0.5
4,489,341	-				+1.2
4,489,341	-				+0.6
4,489,341	-				+0.3
4,489,371	+				+0.6
4,489,372	-				-1.8
4,489,372	-				+0.1
4,489,409	+				+0.6
4,489,416	-				+0.7
4,489,416	-				-0.3
4,489,417	+				+1.5
4,489,417	+				+0.2
4,489,417	+				+1.1
4,489,417	+				+0.2
4,489,418	-				+0.2
4,489,418	-				+0.3
4,489,418	-				-0.0
4,489,419	+				+0.1
4,489,419	+				+0.7
4,489,419	+				+0.6
4,489,419	+				+1.1
4,489,420	-				-0.7
4,489,420	-				-0.1
4,489,457	-				-0.3
4,489,460	-				-1.4
4,489,480	+				-0.4
4,489,480	+				+0.8
4,489,481	-				-0.8
4,489,483	+				-1.1
4,489,483	+				+0.6
4,489,484	-				-0.8
4,489,484	-				+0.7
4,489,484	-				-0.8
4,489,484	-				+0.2
4,489,488	-				-1.5
4,489,488	-				+0.9
4,489,505	+				-0.1
4,489,506	-				+0.3
4,489,507	+				-0.9
4,489,507	+				-0.1
4,489,507	+				-0.1
4,489,507	+				-0.2
4,489,508	-				+0.1
4,489,508	-				+0.2
4,489,640	+		HER17_RS19985	0.13	+0.0
4,489,641	-		HER17_RS19985	0.13	-0.2
4,489,648	+		HER17_RS19985	0.13	+0.4
4,489,648	+		HER17_RS19985	0.13	+0.4
4,489,649	-		HER17_RS19985	0.13	+0.2
4,489,649	-		HER17_RS19985	0.13	-0.7
4,489,754	+		HER17_RS19985	0.21	+1.1
4,489,755	-		HER17_RS19985	0.21	+0.5
4,489,773	+		HER17_RS19985	0.23	-1.6
4,489,829	+		HER17_RS19985	0.27	-0.2
4,489,829	+		HER17_RS19985	0.27	+0.4
4,489,845	+		HER17_RS19985	0.28	-0.8
4,489,846	-		HER17_RS19985	0.28	-1.8
4,489,846	-		HER17_RS19985	0.28	-0.6
4,489,846	-		HER17_RS19985	0.28	-1.1
4,489,895	-		HER17_RS19985	0.31	-1.4
4,490,019	-		HER17_RS19985	0.40	+0.6
4,490,021	+		HER17_RS19985	0.41	+0.0
4,490,207	+		HER17_RS19985	0.54	-0.1