Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,396,046	+				+0.5
4,396,087	-				+0.9
4,396,242	-				-0.0
4,396,296	-				-2.4
4,396,316	-				-0.6
4,396,324	+				-0.5
4,396,324	+				+0.4
4,396,326	+				-0.1
4,396,327	-				+0.4
4,396,330	+				-0.5
4,396,336	+				-1.7
4,396,336	+				-1.7
4,396,337	-				-0.2
4,396,354	+				+0.7
4,396,354	+				-0.2
4,396,355	-				+0.0
4,396,428	+		HER17_RS19570	0.24	-0.4
4,396,428	+		HER17_RS19570	0.24	-1.0
4,396,428	+		HER17_RS19570	0.24	-0.3
4,396,438	+		HER17_RS19570	0.26	+0.5
4,396,450	+		HER17_RS19570	0.28	+0.1
4,396,455	-		HER17_RS19570	0.29	+0.1
4,396,522	+		HER17_RS19570	0.42	+0.6
4,396,522	+		HER17_RS19570	0.42	+0.2
4,396,786	+				+0.5
4,396,822	+				-1.7
4,396,823	-				-0.3
4,396,872	+				-0.2
4,396,873	-				-0.0
4,396,877	-				-0.7
4,396,934	+				-0.5
4,396,939	-				-0.0
4,396,980	+				-0.0
4,396,991	+				-0.5
4,396,992	-				+0.2
4,397,004	-				+0.2
4,397,004	-				+0.1
4,397,094	+		HER17_RS19575	0.16	-2.1
4,397,169	+		HER17_RS19575	0.34	-0.5
4,397,200	-		HER17_RS19575	0.41	-1.5
4,397,269	+		HER17_RS19575	0.58	+0.5
4,397,270	-		HER17_RS19575	0.58	-0.4
4,397,270	-		HER17_RS19575	0.58	+0.3
4,397,332	+		HER17_RS19575	0.73	-1.0
4,397,333	-		HER17_RS19575	0.73	-0.1
4,397,333	-		HER17_RS19575	0.73	+0.1
4,397,360	-		HER17_RS19575	0.80	-0.2
4,397,414	+				-0.2
4,397,414	+				+0.2
4,397,415	-				+0.4
4,397,415	-				-0.3
4,397,415	-				-0.4
4,397,437	+				-0.7
4,397,437	+				-1.4
4,397,437	+				-0.8
4,397,438	-				-0.8
4,397,438	-				-1.5
4,397,449	+				+0.9
4,397,463	+				-0.6
4,397,464	-				+0.6
4,397,464	-				-0.3
4,397,464	-				-0.4
4,397,485	-				+1.2
4,397,485	-				-1.2
4,397,516	+				-0.2
4,397,639	-				+1.5
4,397,644	+				+1.1
4,397,687	-				+0.2
4,397,687	-				-0.4
4,397,692	+				+0.1
4,397,713	-		HER17_RS19580	0.12	+0.4
4,397,776	+		HER17_RS19580	0.36	+0.4
4,397,776	+		HER17_RS19580	0.36	+0.2
4,397,776	+		HER17_RS19580	0.36	-0.4
4,397,777	-		HER17_RS19580	0.37	-0.4
4,397,777	-		HER17_RS19580	0.37	-0.1
4,397,777	-		HER17_RS19580	0.37	+0.4
4,397,777	-		HER17_RS19580	0.37	+1.0
4,397,777	-		HER17_RS19580	0.37	+0.6
4,397,780	-		HER17_RS19580	0.38	-0.2
4,397,864	-		HER17_RS19580	0.70	+0.2
4,397,904	+		HER17_RS19580	0.85	+0.3
4,397,904	+		HER17_RS19580	0.85	-0.1
4,397,905	-		HER17_RS19580	0.86	-0.1
4,397,937	-				-0.4
4,397,937	-				+0.4
4,397,937	-				-0.2
4,397,937	-				+0.3
4,397,937	-				+0.1
4,397,953	+				+0.3
4,397,963	+				+0.1
4,398,401	+				+0.2