Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,850,490	+				-0.2
3,850,490	+				+0.0
3,850,491	-				-0.3
3,850,518	+				+0.2
3,850,518	+				-0.3
3,850,518	+				+0.8
3,850,521	+				+0.0
3,850,522	-				+0.1
3,850,522	-				-2.6
3,850,522	-				+0.2
3,850,522	-				-0.0
3,850,558	+				+0.6
3,850,642	-				-0.2
3,850,642	-				+0.0
3,850,678	+				+0.0
3,850,678	+				+0.1
3,850,678	+				+0.7
3,850,678	+				-0.2
3,850,679	-				+0.8
3,850,679	-				+0.9
3,850,679	-				-0.4
3,850,723	-				+0.1
3,850,742	+				+0.2
3,850,742	+				-0.2
3,850,785	+				+0.5
3,850,855	+		HER17_RS17105	0.20	+0.2
3,850,856	-		HER17_RS17105	0.20	-0.0
3,850,893	-		HER17_RS17105	0.26	+0.5
3,850,937	+		HER17_RS17105	0.32	+0.7
3,850,938	-		HER17_RS17105	0.32	+0.5
3,851,236	+		HER17_RS17105	0.77	-0.5
3,851,237	-		HER17_RS17105	0.78	+0.5
3,851,326	+				+0.1
3,851,330	+				-0.0
3,851,367	+				+0.6
3,851,368	-				+0.4
3,851,396	+				+0.5
3,851,415	+				-0.5
3,851,416	-				+0.0
3,851,492	-		HER17_RS17110	0.15	+0.3
3,851,496	+		HER17_RS17110	0.16	-0.1
3,851,497	-		HER17_RS17110	0.16	+0.1
3,851,506	+		HER17_RS17110	0.18	+0.2
3,851,506	+		HER17_RS17110	0.18	+0.4
3,851,506	+		HER17_RS17110	0.18	-0.9
3,851,506	+		HER17_RS17110	0.18	+1.6
3,851,507	-		HER17_RS17110	0.18	+0.9
3,851,508	+		HER17_RS17110	0.18	-0.4
3,851,508	+		HER17_RS17110	0.18	-0.9
3,851,508	+		HER17_RS17110	0.18	-0.1
3,851,508	+		HER17_RS17110	0.18	-1.0
3,851,508	+		HER17_RS17110	0.18	-0.1
3,851,508	+		HER17_RS17110	0.18	+0.4
3,851,508	+		HER17_RS17110	0.18	+0.4
3,851,509	-		HER17_RS17110	0.18	+0.8
3,851,509	-		HER17_RS17110	0.18	-1.2
3,851,509	-		HER17_RS17110	0.18	+0.8
3,851,509	-		HER17_RS17110	0.18	+0.5
3,851,509	-		HER17_RS17110	0.18	-1.3
3,851,509	-		HER17_RS17110	0.18	-0.0
3,851,509	-		HER17_RS17110	0.18	-0.5
3,851,509	-		HER17_RS17110	0.18	+0.7
3,851,509	-		HER17_RS17110	0.18	+0.3
3,851,513	+		HER17_RS17110	0.19	-0.6
3,851,521	-		HER17_RS17110	0.21	+0.8
3,851,617	+		HER17_RS17110	0.41	-0.0
3,851,650	+		HER17_RS17110	0.49	+0.2
3,851,651	-		HER17_RS17110	0.49	+0.2
3,851,712	+		HER17_RS17110	0.62	-2.6
3,851,713	-		HER17_RS17110	0.62	-0.5
3,851,719	+		HER17_RS17110	0.63	-0.5
3,851,719	+		HER17_RS17110	0.63	-1.9
3,851,720	-		HER17_RS17110	0.63	-0.9
3,851,749	+		HER17_RS17110	0.70	+0.7
3,851,749	+		HER17_RS17110	0.70	-0.7
3,851,749	+		HER17_RS17110	0.70	+0.9
3,851,749	+		HER17_RS17110	0.70	-0.3
3,851,750	-		HER17_RS17110	0.70	+0.2
3,851,750	-		HER17_RS17110	0.70	-1.2
3,851,750	-		HER17_RS17110	0.70	+0.5
3,851,750	-		HER17_RS17110	0.70	-0.3
3,851,750	-		HER17_RS17110	0.70	+0.1
3,851,750	-		HER17_RS17110	0.70	+0.3
3,851,782	+		HER17_RS17110	0.77	-0.6
3,851,829	-		HER17_RS17110	0.87	-0.7
3,851,851	-				+1.0
3,851,851	-				+0.1
3,851,865	-				+0.3
3,851,865	-				+0.1
3,851,890	+				+0.1
3,851,890	+				+0.3
3,851,890	+				-0.0
3,851,891	-				+0.0
3,851,904	+				-0.3
3,851,905	-				-0.3
3,851,958	+				+0.1
3,851,958	+				-1.6
3,851,993	-				-0.3
3,852,031	+				+0.0
3,852,031	+				+0.3
3,852,054	+				-0.0
3,852,054	+				+0.5
3,852,055	-				-0.9
3,852,055	-				+0.8
3,852,055	-				+0.2
3,852,061	+				-0.7
3,852,061	+				+0.8
3,852,062	-				+0.6
3,852,062	-				-0.1
3,852,062	-				+1.0
3,852,065	+				+0.1
3,852,065	+				+0.4
3,852,065	+				-0.5
3,852,065	+				+1.9
3,852,065	+				+0.5
3,852,065	+				+0.2
3,852,066	-				-0.5
3,852,077	-				+0.2
3,852,077	-				-0.2
3,852,153	+				+1.0
3,852,154	-				+0.3
3,852,154	-				+0.7
3,852,154	-				-0.0
3,852,278	+		HER17_RS17115	0.24	+0.7
3,852,279	-		HER17_RS17115	0.24	-1.8
3,852,391	+		HER17_RS17115	0.37	+0.5
3,852,659	-		HER17_RS17115	0.67	-1.8
3,852,659	-		HER17_RS17115	0.67	-0.3
3,852,666	+		HER17_RS17115	0.68	-0.8
3,852,666	+		HER17_RS17115	0.68	+0.4
3,852,667	-		HER17_RS17115	0.68	+0.3
3,852,670	+		HER17_RS17115	0.68	+0.6
3,852,670	+		HER17_RS17115	0.68	-0.3
3,852,670	+		HER17_RS17115	0.68	-0.4
3,852,671	-		HER17_RS17115	0.68	-0.3
3,852,671	-		HER17_RS17115	0.68	-1.6
3,852,671	-		HER17_RS17115	0.68	+1.0
3,852,671	-		HER17_RS17115	0.68	-0.2
3,852,673	-		HER17_RS17115	0.69	+0.7
3,852,724	+		HER17_RS17115	0.74	+0.3
3,852,725	-		HER17_RS17115	0.75	-0.1
3,852,725	-		HER17_RS17115	0.75	-1.2
3,852,729	+		HER17_RS17115	0.75	+0.4
3,852,729	+		HER17_RS17115	0.75	+0.6
3,852,729	+		HER17_RS17115	0.75	+0.7
3,852,729	+		HER17_RS17115	0.75	+0.9
3,852,729	+		HER17_RS17115	0.75	+0.2
3,852,729	+		HER17_RS17115	0.75	-0.2
3,852,729	+		HER17_RS17115	0.75	+0.5
3,852,729	+		HER17_RS17115	0.75	-0.8
3,852,729	+		HER17_RS17115	0.75	-1.5
3,852,729	+		HER17_RS17115	0.75	+0.3
3,852,729	+		HER17_RS17115	0.75	+0.1
3,852,729	+		HER17_RS17115	0.75	+0.1
3,852,729	+		HER17_RS17115	0.75	+0.6
3,852,730	-		HER17_RS17115	0.75	+0.7
3,852,730	-		HER17_RS17115	0.75	-0.3
3,852,730	-		HER17_RS17115	0.75	+0.2
3,852,730	-		HER17_RS17115	0.75	+0.2
3,852,730	-		HER17_RS17115	0.75	+0.8
3,852,730	-		HER17_RS17115	0.75	-0.1
3,852,768	+		HER17_RS17115	0.79	+1.5
3,852,796	+		HER17_RS17115	0.83	-0.1