Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15965

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,584,648	-				-0.2
3,584,672	-				+0.6
3,584,747	+		HER17_RS15965	0.17	-0.5
3,584,747	+		HER17_RS15965	0.17	-1.9
3,584,748	-		HER17_RS15965	0.17	-0.4
3,584,750	-		HER17_RS15965	0.18	-0.3
3,584,750	-		HER17_RS15965	0.18	-0.1
3,584,750	-		HER17_RS15965	0.18	-0.3
3,584,750	-		HER17_RS15965	0.18	-0.1
3,584,750	-		HER17_RS15965	0.18	-0.8
3,584,750	-		HER17_RS15965	0.18	-1.7
3,584,750	-		HER17_RS15965	0.18	+0.1
3,584,750	-		HER17_RS15965	0.18	+0.1
3,584,807	+		HER17_RS15965	0.30	+0.3
3,584,808	-		HER17_RS15965	0.31	+0.5
3,584,811	-		HER17_RS15965	0.31	+0.1
3,584,811	-		HER17_RS15965	0.31	-0.7
3,584,811	-		HER17_RS15965	0.31	-1.2
3,584,811	-		HER17_RS15965	0.31	+0.2
3,584,846	+		HER17_RS15965	0.39	-0.6
3,584,846	+		HER17_RS15965	0.39	-0.6
3,584,847	-		HER17_RS15965	0.39	+0.1
3,584,855	+		HER17_RS15965	0.41	+0.1
3,584,855	+		HER17_RS15965	0.41	+0.1
3,584,855	+		HER17_RS15965	0.41	-1.3
3,584,855	+		HER17_RS15965	0.41	-0.5
3,584,856	-		HER17_RS15965	0.41	+0.1
3,584,856	-		HER17_RS15965	0.41	-1.1
3,584,856	-		HER17_RS15965	0.41	+0.4
3,584,927	+		HER17_RS15965	0.57	-0.2
3,584,928	-		HER17_RS15965	0.57	-2.5
3,584,937	-		HER17_RS15965	0.59	-1.3
3,585,045	+		HER17_RS15965	0.83	+0.1
3,585,045	+		HER17_RS15965	0.83	+0.1
3,585,148	+				-1.4
3,585,149	-				-0.9
3,585,149	-				+0.0
3,585,229	+				+0.1
3,585,253	+				-0.4
3,585,254	-				+0.1
3,585,254	-				+1.6
3,585,260	+				-0.1
3,585,260	+				-0.0
3,585,260	+				+0.1
3,585,260	+				-0.0
3,585,266	+				-0.2
3,585,310	+				-0.7
3,585,337	-				+0.5
3,585,337	-				+0.1
3,585,434	+		HER17_RS15970	0.17	+0.6
3,585,455	+		HER17_RS15970	0.21	+0.8
3,585,456	-		HER17_RS15970	0.21	+0.1
3,585,533	+		HER17_RS15970	0.34	-0.6
3,585,534	-		HER17_RS15970	0.35	+0.8
3,585,534	-		HER17_RS15970	0.35	+0.0
3,585,574	-		HER17_RS15970	0.42	-0.3
3,585,574	-		HER17_RS15970	0.42	-0.0
3,585,590	+		HER17_RS15970	0.44	-0.3
3,585,591	-		HER17_RS15970	0.45	+0.3
3,585,591	-		HER17_RS15970	0.45	-0.9
3,585,591	-		HER17_RS15970	0.45	+0.0
3,585,619	-		HER17_RS15970	0.49	+0.7
3,585,773	+		HER17_RS15970	0.76	+0.7
3,585,773	+		HER17_RS15970	0.76	-0.3
3,585,773	+		HER17_RS15970	0.76	+0.7
3,585,776	+		HER17_RS15970	0.77	+0.9
3,585,776	+		HER17_RS15970	0.77	-0.6
3,585,776	+		HER17_RS15970	0.77	+0.4
3,585,867	-				-0.3
3,585,867	-				+0.4
3,585,867	-				+0.3
3,585,907	+				+0.0
3,585,913	+				-0.1
3,585,913	+				+0.5
3,585,914	-				+0.4
3,585,966	+				-0.0
3,585,990	+				-0.1