Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15770

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,542,269	+				+0.8
3,542,513	+				+0.2
3,542,514	-				+0.7
3,542,553	-				-1.7
3,542,611	-				-0.6
3,542,646	-				+0.2
3,542,670	-				-0.2
3,542,697	+				-0.4
3,542,697	+				-1.0
3,542,697	+				-0.9
3,542,697	+				+0.4
3,542,743	+				-0.8
3,542,797	+				-0.3
3,542,808	+				+0.5
3,542,837	+				-0.0
3,542,837	+				+0.4
3,542,838	-				-0.1
3,542,838	-				+0.6
3,542,840	-				+0.7
3,542,841	+				+0.2
3,542,841	+				+0.5
3,542,841	+				-2.0
3,542,841	+				+0.7
3,542,842	-				+0.5
3,542,842	-				+0.4
3,542,842	-				+0.4
3,542,859	+				+0.0
3,542,878	+				+0.5
3,542,878	+				+0.3
3,542,879	-				+0.3
3,542,879	-				+0.8
3,543,149	-				-0.8
3,543,149	-				+0.9
3,543,184	-				-0.9
3,543,184	-				+1.1
3,543,184	-				-0.3
3,543,303	+		HER17_RS15770	0.24	-0.5
3,543,303	+		HER17_RS15770	0.24	+0.5
3,543,364	+		HER17_RS15770	0.43	-0.6
3,543,365	-		HER17_RS15770	0.44	-1.0
3,543,365	-		HER17_RS15770	0.44	-0.2
3,543,428	-		HER17_RS15770	0.63	-0.1
3,543,428	-		HER17_RS15770	0.63	+0.6
3,543,447	+		HER17_RS15770	0.69	+0.4
3,543,447	+		HER17_RS15770	0.69	+0.7
3,543,447	+		HER17_RS15770	0.69	+0.9
3,543,447	+		HER17_RS15770	0.69	-0.2
3,543,447	+		HER17_RS15770	0.69	+0.3
3,543,448	-		HER17_RS15770	0.69	+0.1
3,543,448	-		HER17_RS15770	0.69	+0.2
3,543,448	-		HER17_RS15770	0.69	+0.3
3,543,448	-		HER17_RS15770	0.69	+0.5
3,543,448	-		HER17_RS15770	0.69	-0.3
3,543,448	-		HER17_RS15770	0.69	-0.2
3,543,451	+		HER17_RS15770	0.70	+2.4
3,543,451	+		HER17_RS15770	0.70	-0.1
3,543,451	+		HER17_RS15770	0.70	-0.2
3,543,470	-		HER17_RS15770	0.76	-0.5
3,543,485	+		HER17_RS15770	0.81	-0.1
3,543,618	+				-0.1
3,543,618	+				+1.1
3,543,618	+				+0.5
3,543,618	+				-0.3
3,543,618	+				-1.0
3,543,619	-				+0.1
3,543,619	-				-0.0
3,543,619	-				+0.1
3,543,730	-		HER17_RS15775	0.28	+0.3
3,543,796	+		HER17_RS15775	0.40	+0.8
3,543,820	-		HER17_RS15775	0.44	-0.5
3,543,820	-		HER17_RS15775	0.44	+0.8
3,543,831	+		HER17_RS15775	0.46	-0.2
3,543,833	+		HER17_RS15775	0.46	-0.4
3,543,833	+		HER17_RS15775	0.46	+0.1
3,543,833	+		HER17_RS15775	0.46	+0.2
3,543,834	-		HER17_RS15775	0.46	-0.7
3,543,834	-		HER17_RS15775	0.46	+0.2
3,543,873	+		HER17_RS15775	0.53	+0.1
3,543,982	-		HER17_RS15775	0.72	-0.2
3,544,132	-				-0.4
3,544,132	-				+0.2
3,544,132	-				-0.7
3,544,132	-				-0.4
3,544,132	-				+1.5
3,544,138	+				-0.1
3,544,201	+				+0.1
3,544,201	+				+0.0
3,544,202	-				+1.4
3,544,202	-				+0.4
3,544,202	-				+0.7
3,544,202	-				+0.1
3,544,205	+				-0.0
3,544,205	+				+0.1
3,544,205	+				+0.2
3,544,205	+				+0.4
3,544,206	-				+0.3
3,544,209	-				+0.3
3,544,209	-				+0.1
3,544,209	-				-0.3
3,544,227	+				+0.2
3,544,227	+				+0.3
3,544,228	-				-0.1
3,544,272	+				+1.0
3,544,273	-				+0.1
3,544,273	-				-0.8
3,544,273	-				-0.6
3,544,342	-				-0.8
3,544,372	+				-0.0
3,544,372	+				+0.7
3,544,373	-				-0.5
3,544,400	-				-0.3
3,544,421	-				+0.5