Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15755

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,540,859	-				+1.6
3,540,897	+		HER17_RS15745	0.20	+0.0
3,540,910	+		HER17_RS15745	0.25	+0.2
3,540,945	+		HER17_RS15745	0.39	-0.3
3,540,946	-		HER17_RS15745	0.40	-0.1
3,540,956	+		HER17_RS15745	0.44	-1.1
3,540,977	-		HER17_RS15745	0.52	+1.0
3,540,977	-		HER17_RS15745	0.52	+0.6
3,540,977	-		HER17_RS15745	0.52	+0.2
3,540,977	-		HER17_RS15745	0.52	-0.5
3,540,977	-		HER17_RS15745	0.52	-0.3
3,541,013	-		HER17_RS15745	0.67	-0.6
3,541,015	+		HER17_RS15745	0.67	+0.0
3,541,015	+		HER17_RS15745	0.67	-1.7
3,541,016	-		HER17_RS15745	0.68	-1.0
3,541,017	+		HER17_RS15745	0.68	-0.0
3,541,036	+		HER17_RS15745	0.76	+0.2
3,541,109	+				-0.4
3,541,124	+				+0.0
3,541,124	+				+0.8
3,541,125	-				+0.4
3,541,132	+		HER17_RS15750	0.13	+0.4
3,541,133	-		HER17_RS15750	0.14	-0.3
3,541,163	+		HER17_RS15750	0.35	-0.3
3,541,164	-		HER17_RS15750	0.35	+0.8
3,541,164	-		HER17_RS15750	0.35	+0.5
3,541,164	-		HER17_RS15750	0.35	-0.3
3,541,164	-		HER17_RS15750	0.35	-2.1
3,541,191	+		HER17_RS15750	0.54	+0.7
3,541,191	+		HER17_RS15750	0.54	-0.2
3,541,191	+		HER17_RS15750	0.54	+0.0
3,541,192	-		HER17_RS15750	0.55	+0.2
3,541,196	+		HER17_RS15750	0.58	-0.7
3,541,196	+		HER17_RS15750	0.58	-0.3
3,541,197	-		HER17_RS15750	0.58	-1.0
3,541,198	+		HER17_RS15750	0.59	-1.2
3,541,199	-		HER17_RS15750	0.60	+0.1
3,541,199	-		HER17_RS15750	0.60	+0.4
3,541,199	-		HER17_RS15750	0.60	-1.2
3,541,199	-		HER17_RS15750	0.60	-0.6
3,541,229	-		HER17_RS15750	0.81	+0.1
3,541,351	-				+0.0
3,541,429	+				-0.1
3,541,430	-				-0.3
3,541,459	+				-0.6
3,541,459	+				-0.3
3,541,460	-				-0.3
3,541,460	-				-0.5
3,541,460	-				+0.6
3,541,502	+				+0.3
3,541,507	-				-0.6
3,541,507	-				-0.1
3,541,521	+				-0.6
3,541,525	+				+0.1
3,541,525	+				+0.2
3,541,558	+				+0.5
3,541,564	+				-0.6
3,541,564	+				+0.4
3,541,564	+				+0.1
3,541,564	+				+0.1
3,541,565	-				+0.1
3,541,566	+				+0.5
3,541,566	+				-1.1
3,541,566	+				+0.5
3,541,566	+				+0.2
3,541,568	+				+0.0
3,541,569	-				+0.1
3,541,569	-				-0.1
3,541,596	+				-0.2
3,541,602	+				+0.3
3,541,603	-				+0.2
3,541,604	+				-0.1
3,541,604	+				+0.1
3,541,608	+				+0.6
3,541,609	-				-0.0
3,541,609	-				+0.1
3,541,615	-				-0.9
3,541,624	+				+1.3
3,541,624	+				+0.5
3,541,625	-				+0.3
3,541,625	-				+0.5
3,541,632	+				+0.4
3,541,633	-				-0.7
3,541,633	-				+0.9
3,541,636	+				+0.0
3,541,647	+				-0.6
3,541,659	+				-1.2
3,541,659	+				+0.2
3,541,659	+				-0.6
3,541,662	+				-0.6
3,541,662	+				+1.0
3,541,663	-				+0.1
3,541,663	-				+0.8
3,541,670	-				-0.5
3,541,780	+				+0.1
3,541,796	-				+0.4
3,541,823	-				+0.8
3,541,856	-				-0.1
3,541,880	+				-0.5
3,541,881	-				-0.1
3,541,881	-				-0.6
3,541,886	-				-0.6
3,541,886	-				+0.1
3,541,998	+		HER17_RS15755	0.38	+1.1
3,541,998	+		HER17_RS15755	0.38	-0.0
3,541,999	-		HER17_RS15755	0.39	-0.2
3,542,017	+		HER17_RS15755	0.44	+0.7
3,542,030	-		HER17_RS15755	0.47	-0.9
3,542,101	+		HER17_RS15755	0.66	-0.2
3,542,101	+		HER17_RS15755	0.66	+0.3
3,542,101	+		HER17_RS15755	0.66	+0.0
3,542,105	+		HER17_RS15755	0.67	+0.6
3,542,105	+		HER17_RS15755	0.67	+0.1
3,542,106	-		HER17_RS15755	0.68	-0.5
3,542,106	-		HER17_RS15755	0.68	+0.5
3,542,106	-		HER17_RS15755	0.68	-0.2
3,542,124	-		HER17_RS15755	0.73	+0.3
3,542,124	-		HER17_RS15755	0.73	-0.5
3,542,145	+		HER17_RS15755	0.78	-0.3
3,542,146	-		HER17_RS15755	0.79	-0.9
3,542,206	+				-1.2
3,542,269	+				+0.8
3,542,513	+				+0.2
3,542,514	-				+0.7
3,542,553	-				-1.7
3,542,611	-				-0.6
3,542,646	-				+0.2
3,542,670	-				-0.2
3,542,697	+				-0.4
3,542,697	+				-1.0
3,542,697	+				-0.9
3,542,697	+				+0.4
3,542,743	+				-0.8
3,542,797	+				-0.3
3,542,808	+				+0.5
3,542,837	+				-0.0
3,542,837	+				+0.4
3,542,838	-				-0.1
3,542,838	-				+0.6
3,542,840	-				+0.7
3,542,841	+				+0.2
3,542,841	+				+0.5
3,542,841	+				-2.0
3,542,841	+				+0.7
3,542,842	-				+0.5
3,542,842	-				+0.4
3,542,842	-				+0.4
3,542,859	+				+0.0
3,542,878	+				+0.5
3,542,878	+				+0.3
3,542,879	-				+0.3
3,542,879	-				+0.8
3,543,149	-				-0.8
3,543,149	-				+0.9
3,543,184	-				-0.9
3,543,184	-				+1.1
3,543,184	-				-0.3