Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15465

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,465,497	-				-0.2
3,465,510	-				+0.4
3,465,510	-				+0.8
3,465,510	-				-0.1
3,465,516	+				-1.1
3,465,568	-				-0.3
3,465,568	-				-0.5
3,465,606	+		HER17_RS15460	0.15	-0.3
3,465,678	+		HER17_RS15460	0.26	-0.1
3,465,805	-		HER17_RS15460	0.46	-1.0
3,465,805	-		HER17_RS15460	0.46	-1.4
3,465,805	-		HER17_RS15460	0.46	+0.5
3,465,838	-		HER17_RS15460	0.52	+0.2
3,465,838	-		HER17_RS15460	0.52	+1.2
3,466,020	+		HER17_RS15460	0.81	+0.7
3,466,020	+		HER17_RS15460	0.81	+0.2
3,466,069	+		HER17_RS15460	0.88	+0.1
3,466,069	+		HER17_RS15460	0.88	+0.1
3,466,070	-		HER17_RS15460	0.89	-0.0
3,466,072	+		HER17_RS15460	0.89	-0.2
3,466,073	-		HER17_RS15460	0.89	-1.1
3,466,073	-		HER17_RS15460	0.89	-0.2
3,466,073	-		HER17_RS15460	0.89	-0.2
3,466,076	-		HER17_RS15460	0.89	-1.4
3,466,097	+				+0.1
3,466,097	+				-0.0
3,466,097	+				+0.9
3,466,098	-				-0.3
3,466,145	+				-0.2
3,466,145	+				+0.2
3,466,146	-				+0.3
3,466,260	+				-1.0
3,466,261	-				-0.2
3,466,263	-				+0.8
3,466,279	-				+0.5
3,466,279	-				+0.5
3,466,292	+				+1.1
3,466,292	+				+0.5
3,466,382	-				+0.5
3,466,396	-				-0.9
3,466,405	+				-0.1
3,466,419	+				+0.1
3,466,419	+				+1.2
3,466,419	+				+0.4
3,466,419	+				-0.1
3,466,420	-				+0.3
3,466,420	-				+1.6
3,466,449	-				-0.6
3,466,503	+				-0.5
3,466,504	-				+0.1
3,466,547	-				+0.6
3,466,553	+				+0.3
3,466,553	+				+0.2
3,466,564	+				-0.4
3,466,564	+				-0.1
3,466,565	-				+0.3
3,466,592	+		HER17_RS15465	0.11	+0.6
3,466,592	+		HER17_RS15465	0.11	-0.6
3,466,924	-		HER17_RS15465	0.43	+0.8
3,466,924	-		HER17_RS15465	0.43	+0.4
3,466,924	-		HER17_RS15465	0.43	+0.8
3,466,924	-		HER17_RS15465	0.43	-1.3
3,466,924	-		HER17_RS15465	0.43	-0.2
3,467,123	+		HER17_RS15465	0.62	+0.0
3,467,246	+		HER17_RS15465	0.74	-0.2
3,467,361	+		HER17_RS15465	0.85	-0.0
3,467,361	+		HER17_RS15465	0.85	+0.3
3,467,367	-		HER17_RS15465	0.86	-0.7
3,467,367	-		HER17_RS15465	0.86	+0.2
3,467,387	+		HER17_RS15465	0.87	+0.7
3,467,387	+		HER17_RS15465	0.87	-0.4
3,467,388	-		HER17_RS15465	0.88	-0.3
3,467,388	-		HER17_RS15465	0.88	+1.2
3,467,510	+				-0.3
3,467,510	+				-0.0
3,467,510	+				-0.1
3,467,511	-				-0.1
3,467,560	-				+0.8
3,467,581	+		HER17_RS15470	0.10	+0.2
3,467,581	+		HER17_RS15470	0.10	+0.1
3,467,626	+		HER17_RS15470	0.17	+0.0
3,467,626	+		HER17_RS15470	0.17	+0.0
3,467,675	-		HER17_RS15470	0.25	-0.7
3,467,675	-		HER17_RS15470	0.25	+0.4
3,467,750	+		HER17_RS15470	0.37	+0.7
3,467,751	-		HER17_RS15470	0.37	-0.0
3,467,751	-		HER17_RS15470	0.37	+0.6
3,467,751	-		HER17_RS15470	0.37	-0.2
3,467,751	-		HER17_RS15470	0.37	-0.1
3,467,772	+		HER17_RS15470	0.40	+0.7
3,467,772	+		HER17_RS15470	0.40	+0.1
3,467,773	-		HER17_RS15470	0.40	+0.7
3,467,773	-		HER17_RS15470	0.40	+0.0
3,467,780	+		HER17_RS15470	0.41	+0.1
3,467,781	-		HER17_RS15470	0.41	+0.1
3,467,781	-		HER17_RS15470	0.41	+0.7
3,467,794	+		HER17_RS15470	0.44	+0.4
3,467,836	+		HER17_RS15470	0.50	+0.2
3,467,837	-		HER17_RS15470	0.50	-0.0
3,467,862	-		HER17_RS15470	0.54	-0.4
3,468,140	+				-0.2
3,468,140	+				+0.3
3,468,166	+				+1.0
3,468,166	+				+0.4
3,468,167	-				+0.2
3,468,167	-				-0.0
3,468,170	+				-0.0
3,468,170	+				+0.7
3,468,171	-				-1.0
3,468,171	-				-0.0
3,468,171	-				-0.6
3,468,171	-				+0.8
3,468,183	+				-0.5
3,468,184	-				-1.4
3,468,186	+				+0.3
3,468,186	+				+0.5
3,468,187	-				-0.4
3,468,187	-				+0.5
3,468,187	-				-0.3
3,468,189	+				+0.3
3,468,190	-				+0.6
3,468,190	-				+0.4
3,468,211	-				+0.3
3,468,220	+				-0.8
3,468,221	-				+0.5
3,468,248	-				+0.1
3,468,281	+				-2.9
3,468,293	-				+0.3
3,468,325	-				+0.8
3,468,395	+				-0.8
3,468,396	-				-0.8
3,468,435	+				-1.2
3,468,443	+				-0.2
3,468,444	-				+0.2
3,468,446	+				+0.2
3,468,446	+				-1.2
3,468,446	+				+0.1
3,468,446	+				-0.5
3,468,446	+				-0.1
3,468,447	-				+0.4
3,468,447	-				+0.8
3,468,447	-				-0.1