Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,453,895	+		HER17_RS15395	0.85	+0.2
3,453,895	+		HER17_RS15395	0.85	+0.1
3,453,896	-		HER17_RS15395	0.85	-0.1
3,453,896	-		HER17_RS15395	0.85	+0.2
3,453,896	-		HER17_RS15395	0.85	+0.6
3,453,896	-		HER17_RS15395	0.85	+0.4
3,453,917	+		HER17_RS15395	0.86	-1.2
3,453,962	-		HER17_RS15395	0.88	-0.4
3,454,544	+		HER17_RS15400	0.71	+1.2
3,454,545	-		HER17_RS15400	0.71	-0.3
3,454,548	+		HER17_RS15400	0.72	+0.2
3,454,548	+		HER17_RS15400	0.72	-0.5
3,454,548	+		HER17_RS15400	0.72	+1.6
3,454,548	+		HER17_RS15400	0.72	-0.4
3,454,548	+		HER17_RS15400	0.72	-0.4
3,454,548	+		HER17_RS15400	0.72	-0.9
3,454,549	-		HER17_RS15400	0.72	-0.2
3,454,549	-		HER17_RS15400	0.72	-0.1
3,454,549	-		HER17_RS15400	0.72	+0.3
3,454,549	-		HER17_RS15400	0.72	+0.6
3,454,563	+		HER17_RS15400	0.75	-0.1
3,454,563	+		HER17_RS15400	0.75	-0.9
3,454,563	+		HER17_RS15400	0.75	+0.4
3,454,563	+		HER17_RS15400	0.75	-2.1
3,454,648	+				+0.2
3,454,649	-				+0.4
3,454,649	-				+1.2
3,454,667	+				+0.4
3,454,667	+				-0.5
3,454,668	-				-0.0
3,454,728	+				+1.0
3,454,728	+				+0.2
3,454,729	-				-0.2
3,454,770	-				+0.2
3,454,770	-				-0.9
3,454,770	-				-0.6
3,454,805	-				+1.1
3,454,830	-				-0.1
3,454,833	+				+0.4
3,454,855	+				-0.0
3,454,934	+				+0.1
3,454,934	+				+0.1
3,454,934	+				+0.3
3,454,935	-				+0.1
3,454,977	+		HER17_RS15405	0.12	+0.1
3,455,141	+		HER17_RS15405	0.35	-0.4
3,455,141	+		HER17_RS15405	0.35	-0.8
3,455,142	-		HER17_RS15405	0.35	-0.3
3,455,142	-		HER17_RS15405	0.35	-0.4
3,455,302	+		HER17_RS15405	0.57	-0.0
3,455,303	-		HER17_RS15405	0.57	+0.5
3,455,303	-		HER17_RS15405	0.57	-1.0
3,455,514	+		HER17_RS15405	0.87	-1.4
3,455,514	+		HER17_RS15405	0.87	-0.2
3,455,515	-		HER17_RS15405	0.87	-0.2
3,455,539	+				+0.7
3,455,539	+				-1.2
3,455,540	-				-0.5
3,455,540	-				+0.3
3,455,540	-				+0.2
3,455,561	+				-0.3
3,455,585	+				+0.2
3,455,611	+				-1.8
3,455,612	-				+1.7
3,455,612	-				+0.5
3,455,615	+				-1.1
3,455,615	+				+0.8
3,455,641	+				+0.5
3,455,745	+				+0.4
3,455,746	-				-1.4
3,455,746	-				-0.1
3,455,752	+				+0.1
3,455,752	+				-1.3
3,455,752	+				-0.8
3,455,813	+				-2.1
3,455,814	-				-0.2
3,455,814	-				+0.3
3,455,856	+		HER17_RS15410	0.10	+0.1
3,455,878	+		HER17_RS15410	0.12	+0.3
3,455,947	+		HER17_RS15410	0.19	-0.2
3,456,043	+		HER17_RS15410	0.28	+0.4
3,456,077	+		HER17_RS15410	0.31	-0.4
3,456,170	+		HER17_RS15410	0.40	+1.3
3,456,197	-		HER17_RS15410	0.43	+0.0
3,456,243	+		HER17_RS15410	0.47	-1.0
3,456,316	+		HER17_RS15410	0.54	+0.1
3,456,465	+		HER17_RS15410	0.69	-0.4
3,456,483	-		HER17_RS15410	0.71	-0.4
3,456,588	+		HER17_RS15410	0.81	-0.8
3,456,589	-		HER17_RS15410	0.81	+0.6
3,456,589	-		HER17_RS15410	0.81	-0.1
3,456,590	+		HER17_RS15410	0.81	-0.0
3,456,590	+		HER17_RS15410	0.81	-0.1
3,456,590	+		HER17_RS15410	0.81	-0.8
3,456,591	-		HER17_RS15410	0.81	+0.5
3,456,595	+		HER17_RS15410	0.81	+0.7
3,456,595	+		HER17_RS15410	0.81	+0.1
3,456,595	+		HER17_RS15410	0.81	+0.3
3,456,596	-		HER17_RS15410	0.81	+0.5
3,456,596	-		HER17_RS15410	0.81	-0.8