Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14445

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,248,410	+		HER17_RS14440	0.66	-0.4
3,248,411	-		HER17_RS14440	0.66	+0.8
3,248,411	-		HER17_RS14440	0.66	-1.4
3,248,422	+		HER17_RS14440	0.67	+0.3
3,248,422	+		HER17_RS14440	0.67	+0.2
3,248,584	+		HER17_RS14440	0.77	+0.8
3,248,643	+		HER17_RS14440	0.81	-0.0
3,248,809	+				+0.7
3,248,856	+				+0.1
3,248,856	+				+0.5
3,248,856	+				+0.1
3,248,856	+				-0.6
3,248,857	-				-0.5
3,248,857	-				+0.1
3,248,857	-				-1.0
3,248,857	-				+0.4
3,248,857	-				+0.5
3,248,911	+				+0.5
3,248,911	+				-0.1
3,248,911	+				-0.9
3,248,912	-				+0.6
3,248,912	-				-0.2
3,248,930	+				-0.3
3,248,930	+				-0.3
3,248,931	-				+0.0
3,248,974	+				+1.4
3,248,975	-				+0.8
3,249,056	-				+0.4
3,249,078	-				+0.3
3,249,228	+				+1.8
3,249,230	+				+0.6
3,249,230	+				+0.8
3,249,231	-				+0.7
3,249,231	-				+0.5
3,249,231	-				+0.1
3,249,245	+				+0.9
3,249,246	-				+0.2
3,249,305	+				-0.3
3,249,305	+				+0.4
3,249,305	+				-0.0
3,249,344	+		HER17_RS14445	0.10	+0.8
3,249,344	+		HER17_RS14445	0.10	+0.0
3,249,515	+		HER17_RS14445	0.30	+0.5
3,249,516	-		HER17_RS14445	0.31	-0.5
3,249,516	-		HER17_RS14445	0.31	+0.8
3,249,695	+		HER17_RS14445	0.51	+0.9
3,249,695	+		HER17_RS14445	0.51	+0.2
3,249,695	+		HER17_RS14445	0.51	-0.1
3,249,695	+		HER17_RS14445	0.51	+0.2
3,249,696	-		HER17_RS14445	0.52	-0.4
3,249,696	-		HER17_RS14445	0.52	-0.4
3,249,696	-		HER17_RS14445	0.52	-0.5
3,249,696	-		HER17_RS14445	0.52	-1.1
3,249,696	-		HER17_RS14445	0.52	-1.2
3,249,697	+		HER17_RS14445	0.52	+0.7
3,249,708	+		HER17_RS14445	0.53	-1.3
3,249,982	-		HER17_RS14445	0.85	+0.7
3,250,026	+				+1.1
3,250,026	+				+0.1
3,250,026	+				+0.6
3,250,026	+				+0.3
3,250,026	+				-0.6
3,250,027	-				+0.0
3,250,027	-				+0.1
3,250,158	+				+0.4
3,250,158	+				-0.1
3,250,159	-				+1.6
3,250,165	-				+0.3
3,250,186	-				-0.7
3,250,189	-				+0.5
3,250,263	+		HER17_RS14450	0.34	-1.4
3,250,263	+		HER17_RS14450	0.34	+0.4
3,250,263	+		HER17_RS14450	0.34	+0.1
3,250,263	+		HER17_RS14450	0.34	+0.0
3,250,263	+		HER17_RS14450	0.34	+0.2
3,250,271	-		HER17_RS14450	0.37	-0.4
3,250,282	-		HER17_RS14450	0.40	-0.8
3,250,500	-				-0.6
3,250,763	+				+0.2
3,250,764	-				-0.5
3,250,804	-				+0.1
3,250,804	-				-0.8
3,250,823	-				+0.1
3,250,853	+				-1.0
3,250,854	-				-0.7
3,250,864	-				-0.8
3,250,935	-		HER17_RS14455	0.13	-0.8
3,250,935	-		HER17_RS14455	0.13	+0.2
3,250,935	-		HER17_RS14455	0.13	+0.2
3,251,027	+		HER17_RS14455	0.21	+0.4
3,251,028	-		HER17_RS14455	0.21	+1.3
3,251,064	+		HER17_RS14455	0.25	-0.2
3,251,064	+		HER17_RS14455	0.25	-0.3
3,251,065	-		HER17_RS14455	0.25	+0.6
3,251,074	+		HER17_RS14455	0.25	-0.7
3,251,074	+		HER17_RS14455	0.25	-0.1
3,251,074	+		HER17_RS14455	0.25	+0.3
3,251,101	-		HER17_RS14455	0.28	+0.3