Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14340

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,222,630	-		HER17_RS14330	0.59	+0.2
3,222,660	-		HER17_RS14330	0.64	+0.9
3,222,660	-		HER17_RS14330	0.64	-1.9
3,222,801	-		HER17_RS14330	0.88	+0.9
3,222,997	-				-0.1
3,223,184	-				-0.9
3,223,185	+				-0.4
3,223,192	+				-0.4
3,223,199	+				-0.1
3,223,250	-				-0.5
3,223,281	+				-1.0
3,223,282	-				+0.3
3,223,282	-				+0.1
3,223,295	+		HER17_RS14335	0.12	-0.1
3,223,334	+		HER17_RS14335	0.24	-0.3
3,223,416	+		HER17_RS14335	0.49	-0.3
3,223,417	-		HER17_RS14335	0.49	+0.5
3,223,417	-		HER17_RS14335	0.49	+0.3
3,223,532	+		HER17_RS14335	0.83	+2.1
3,223,532	+		HER17_RS14335	0.83	+0.2
3,223,532	+		HER17_RS14335	0.83	+0.3
3,223,538	-		HER17_RS14335	0.85	+0.2
3,223,542	-		HER17_RS14335	0.86	+0.6
3,223,595	+				+0.7
3,223,595	+				+0.2
3,223,690	+		HER17_RS14340	0.27	-0.9
3,223,718	+		HER17_RS14340	0.35	-0.3
3,223,727	+		HER17_RS14340	0.38	-0.7
3,223,795	-		HER17_RS14340	0.57	-0.6
3,223,974	-				+0.5
3,223,991	+				-0.1
3,223,991	+				+1.1
3,224,021	-				+0.4
3,224,028	-				+1.1
3,224,056	+				-0.3
3,224,057	-				+0.3
3,224,057	-				+0.6
3,224,058	+				-0.4
3,224,060	+				-1.3
3,224,061	-				-0.5
3,224,061	-				+0.2
3,224,061	-				-0.2
3,224,061	-				-1.1
3,224,061	-				-0.4
3,224,101	-				-1.2
3,224,104	+				-0.9
3,224,104	+				+0.1
3,224,105	-				+1.2
3,224,108	+				-0.3
3,224,108	+				-0.5
3,224,109	-				-1.0
3,224,127	-				+0.2
3,224,127	-				+0.0
3,224,127	-				-0.4
3,224,184	+				-0.0
3,224,192	+				-0.5
3,224,193	-				+0.9
3,224,193	-				+0.1
3,224,193	-				-0.9
3,224,196	+				-0.0
3,224,275	+		HER17_RS14345	0.14	-0.1
3,224,276	-		HER17_RS14345	0.14	+0.8
3,224,279	+		HER17_RS14345	0.14	-0.4
3,224,279	+		HER17_RS14345	0.14	+0.1
3,224,280	-		HER17_RS14345	0.15	+0.6
3,224,324	+		HER17_RS14345	0.19	-0.6
3,224,324	+		HER17_RS14345	0.19	-0.2
3,224,324	+		HER17_RS14345	0.19	+0.0
3,224,324	+		HER17_RS14345	0.19	+0.2
3,224,324	+		HER17_RS14345	0.19	-0.1
3,224,325	-		HER17_RS14345	0.19	+0.6
3,224,325	-		HER17_RS14345	0.19	+0.1
3,224,325	-		HER17_RS14345	0.19	-0.1
3,224,325	-		HER17_RS14345	0.19	-0.5
3,224,325	-		HER17_RS14345	0.19	-0.2
3,224,325	-		HER17_RS14345	0.19	+0.4
3,224,325	-		HER17_RS14345	0.19	-1.9
3,224,325	-		HER17_RS14345	0.19	-0.1
3,224,325	-		HER17_RS14345	0.19	-0.3
3,224,325	-		HER17_RS14345	0.19	-0.0
3,224,335	+		HER17_RS14345	0.20	-3.4
3,224,335	+		HER17_RS14345	0.20	+0.2
3,224,346	+		HER17_RS14345	0.21	-0.1
3,224,406	+		HER17_RS14345	0.26	+0.0
3,224,407	-		HER17_RS14345	0.26	-0.8
3,224,502	+		HER17_RS14345	0.35	+0.3
3,224,503	-		HER17_RS14345	0.35	-0.2
3,224,666	+		HER17_RS14345	0.51	-0.0
3,224,681	-		HER17_RS14345	0.52	-0.9
3,224,681	-		HER17_RS14345	0.52	-0.4
3,224,681	-		HER17_RS14345	0.52	+0.1
3,224,681	-		HER17_RS14345	0.52	-1.8
3,224,743	-		HER17_RS14345	0.58	-0.4
3,224,743	-		HER17_RS14345	0.58	-2.2
3,224,761	+		HER17_RS14345	0.60	+0.7
3,224,794	-		HER17_RS14345	0.63	-0.0
3,224,794	-		HER17_RS14345	0.63	+0.5
3,224,825	+		HER17_RS14345	0.66	+0.3
3,224,825	+		HER17_RS14345	0.66	+0.8
3,224,825	+		HER17_RS14345	0.66	-0.5
3,224,826	-		HER17_RS14345	0.66	+0.5
3,224,826	-		HER17_RS14345	0.66	+0.1
3,224,827	+		HER17_RS14345	0.66	+0.2
3,224,827	+		HER17_RS14345	0.66	-0.9
3,224,827	+		HER17_RS14345	0.66	+0.2
3,224,827	+		HER17_RS14345	0.66	+0.0
3,224,828	-		HER17_RS14345	0.66	+0.2
3,224,828	-		HER17_RS14345	0.66	-0.0
3,224,828	-		HER17_RS14345	0.66	-0.4
3,224,828	-		HER17_RS14345	0.66	-0.4
3,224,828	-		HER17_RS14345	0.66	+0.1
3,224,828	-		HER17_RS14345	0.66	+0.0
3,224,844	+		HER17_RS14345	0.68	-0.4
3,224,844	+		HER17_RS14345	0.68	+0.5
3,224,845	-		HER17_RS14345	0.68	-0.4
3,224,849	-		HER17_RS14345	0.68	+0.5
3,224,864	+		HER17_RS14345	0.69	-0.8
3,224,864	+		HER17_RS14345	0.69	+0.8
3,224,864	+		HER17_RS14345	0.69	+0.0
3,224,864	+		HER17_RS14345	0.69	-0.7
3,224,864	+		HER17_RS14345	0.69	-0.0
3,224,865	-		HER17_RS14345	0.69	-0.4
3,224,871	+		HER17_RS14345	0.70	-0.0
3,224,871	+		HER17_RS14345	0.70	-0.1
3,224,872	-		HER17_RS14345	0.70	-1.1
3,224,875	-		HER17_RS14345	0.70	+0.3
3,224,930	+		HER17_RS14345	0.76	+0.5
3,224,930	+		HER17_RS14345	0.76	+0.5