Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,988,272	+		HER17_RS13490	0.47	-0.9
2,988,745	+		HER17_RS13490	0.75	-0.6
2,988,828	+		HER17_RS13490	0.80	-2.0
2,988,828	+		HER17_RS13490	0.80	-1.2
2,988,829	-		HER17_RS13490	0.80	-1.4
2,988,829	-		HER17_RS13490	0.80	-0.3
2,988,829	-		HER17_RS13490	0.80	-0.6
2,988,836	+		HER17_RS13490	0.80	-4.1
2,988,870	+		HER17_RS13490	0.82	-2.4
2,988,892	+		HER17_RS13490	0.83	-0.9
2,988,920	+		HER17_RS13490	0.85	-1.4
2,988,921	-		HER17_RS13490	0.85	-0.9
2,988,932	+		HER17_RS13490	0.86	-0.3
2,988,933	-		HER17_RS13490	0.86	-0.4
2,989,040	+				-0.2
2,989,127	+				-1.1
2,989,128	-				-0.1
2,989,155	+				+0.8
2,989,156	-				-2.5
2,989,156	-				-1.5
2,989,163	+				+0.3
2,989,174	-				-0.8
2,989,174	-				+0.5
2,989,183	-				-1.1
2,989,269	+				-0.3
2,989,275	-				+1.1
2,989,307	+				+1.0
2,989,493	+		HER17_RS13495	0.30	-0.5
2,989,494	-		HER17_RS13495	0.30	+0.5
2,989,549	+		HER17_RS13495	0.36	-0.2
2,989,550	-		HER17_RS13495	0.36	+1.4
2,989,553	+		HER17_RS13495	0.37	-0.2
2,989,553	+		HER17_RS13495	0.37	+0.0
2,989,554	-		HER17_RS13495	0.37	+0.4
2,989,554	-		HER17_RS13495	0.37	-0.7
2,989,554	-		HER17_RS13495	0.37	+0.1
2,989,554	-		HER17_RS13495	0.37	-0.4
2,989,686	-		HER17_RS13495	0.51	+0.5
2,989,730	+		HER17_RS13495	0.56	-0.9
2,989,747	+		HER17_RS13495	0.58	-0.4
2,989,747	+		HER17_RS13495	0.58	+0.1
2,989,748	-		HER17_RS13495	0.58	+0.3
2,989,751	-		HER17_RS13495	0.58	+0.1
2,989,751	-		HER17_RS13495	0.58	-0.2
2,989,826	+		HER17_RS13495	0.67	-0.3
2,989,827	-		HER17_RS13495	0.67	+0.3
2,989,867	-		HER17_RS13495	0.71	-0.9
2,989,922	-		HER17_RS13495	0.77	+0.8
2,989,958	-		HER17_RS13495	0.81	+0.2
2,989,958	-		HER17_RS13495	0.81	+0.2
2,989,993	-		HER17_RS13495	0.85	+0.6
2,990,073	-				+0.5
2,990,078	+				+0.5
2,990,103	-				-1.1
2,990,103	-				+0.1
2,990,103	-				+1.2
2,990,108	+				-0.8
2,990,109	-				-0.3
2,990,109	-				+0.9
2,990,109	-				+0.1
2,990,109	-				+0.1
2,990,137	+				-0.2
2,990,137	+				+0.3
2,990,142	-				+0.7
2,990,170	+				-1.2
2,990,170	+				+0.2
2,990,171	-				+0.1
2,990,171	-				+0.2
2,990,178	-				+0.1
2,990,178	-				+1.1
2,990,223	+				-0.8
2,990,224	-				+0.0
2,990,444	+		HER17_RS13500	0.33	-1.2
2,990,444	+		HER17_RS13500	0.33	+0.1
2,990,444	+		HER17_RS13500	0.33	+0.2
2,990,445	-		HER17_RS13500	0.34	+0.3
2,990,445	-		HER17_RS13500	0.34	-3.9
2,990,445	-		HER17_RS13500	0.34	+0.4
2,990,446	+		HER17_RS13500	0.34	+0.2
2,990,446	+		HER17_RS13500	0.34	-0.8
2,990,446	+		HER17_RS13500	0.34	-0.9
2,990,446	+		HER17_RS13500	0.34	+0.3
2,990,446	+		HER17_RS13500	0.34	+0.6
2,990,446	+		HER17_RS13500	0.34	+0.4
2,990,446	+		HER17_RS13500	0.34	+0.8
2,990,446	+		HER17_RS13500	0.34	-0.2
2,990,447	-		HER17_RS13500	0.34	+0.6
2,990,447	-		HER17_RS13500	0.34	-0.4
2,990,447	-		HER17_RS13500	0.34	+0.8
2,990,447	-		HER17_RS13500	0.34	+0.3
2,990,447	-		HER17_RS13500	0.34	+0.3
2,990,447	-		HER17_RS13500	0.34	-1.5
2,990,539	+		HER17_RS13500	0.44	-0.3
2,990,605	-		HER17_RS13500	0.51	-0.5
2,990,822	+		HER17_RS13500	0.74	-0.2
2,991,031	-				+0.6
2,991,038	+				+0.2
2,991,046	+				-0.3
2,991,046	+				-2.0
2,991,125	+				-2.2