Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11780

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,616,413	+				+0.4
2,616,414	-				+0.9
2,616,414	-				-0.5
2,616,526	-				-0.6
2,616,528	+				-0.3
2,616,583	+		HER17_RS11775	0.15	-0.6
2,616,611	+		HER17_RS11775	0.20	+0.5
2,616,611	+		HER17_RS11775	0.20	-0.1
2,616,621	-		HER17_RS11775	0.21	-1.7
2,616,624	+		HER17_RS11775	0.22	-0.2
2,617,161	+				-0.1
2,617,161	+				-0.2
2,617,161	+				-0.4
2,617,161	+				+0.2
2,617,162	-				-0.2
2,617,162	-				+1.1
2,617,162	-				-0.7
2,617,165	+				+1.2
2,617,165	+				-1.3
2,617,166	-				-0.0
2,617,166	-				+0.6
2,617,166	-				-0.8
2,617,166	-				+0.3
2,617,167	+				-0.3
2,617,167	+				-0.4
2,617,168	-				+0.0
2,617,168	-				+0.2
2,617,169	+				-1.0
2,617,170	-				+0.0
2,617,170	-				+0.4
2,617,229	+				-0.2
2,617,229	+				-0.6
2,617,229	+				-0.4
2,617,229	+				+1.8
2,617,230	-				+0.7
2,617,230	-				+0.1
2,617,230	-				+0.5
2,617,230	-				+0.4
2,617,230	-				+0.5
2,617,277	-				-0.4
2,617,284	+				-0.8
2,617,284	+				-0.1
2,617,284	+				-1.2
2,617,285	-				-0.0
2,617,285	-				-0.4
2,617,376	+				-1.5
2,617,377	-				-0.2
2,617,511	+		HER17_RS11780	0.14	+0.1
2,617,511	+		HER17_RS11780	0.14	-0.8
2,617,511	+		HER17_RS11780	0.14	-0.6
2,617,512	-		HER17_RS11780	0.15	-0.4
2,617,512	-		HER17_RS11780	0.15	+0.2
2,617,608	+		HER17_RS11780	0.21	-0.5
2,617,721	+		HER17_RS11780	0.29	+0.5
2,617,722	-		HER17_RS11780	0.29	-0.5
2,617,773	-		HER17_RS11780	0.32	+0.8
2,617,773	-		HER17_RS11780	0.32	-0.3
2,617,872	-		HER17_RS11780	0.39	-0.1
2,617,884	+		HER17_RS11780	0.40	-0.2
2,618,135	-		HER17_RS11780	0.57	-0.5
2,618,217	+		HER17_RS11780	0.62	-0.8
2,618,544	+		HER17_RS11780	0.84	-0.5
2,618,545	-		HER17_RS11780	0.85	-0.8
2,618,598	+		HER17_RS11780	0.88	+0.2
2,618,599	-		HER17_RS11780	0.88	+0.5
2,618,600	+		HER17_RS11780	0.88	+0.0
2,618,600	+		HER17_RS11780	0.88	-0.2
2,618,721	+				+0.2
2,618,821	+				+0.6
2,618,835	-				+0.7
2,618,867	+				-0.4
2,618,868	-				+0.3
2,618,897	+				+0.8
2,618,928	+				-1.2
2,618,928	+				-1.7
2,619,025	+				-0.1
2,619,025	+				-1.3
2,619,025	+				-1.1
2,619,026	-				-0.5
2,619,026	-				+0.5
2,619,026	-				+0.2
2,619,026	-				+1.1
2,619,026	-				+1.1
2,619,026	-				-0.6
2,619,026	-				+0.6
2,619,065	+				+0.9
2,619,069	-				+0.0
2,619,069	-				+0.9
2,619,071	-				+0.3
2,619,112	+				-0.3
2,619,116	-				+1.0
2,619,134	+				-0.0
2,619,135	-				+0.2
2,619,155	+				-0.5
2,619,172	-				-0.2
2,619,178	-				+0.6
2,619,375	-		HER17_RS11785	0.23	+0.2
2,619,402	+		HER17_RS11785	0.26	+0.9
2,619,403	-		HER17_RS11785	0.27	-0.2
2,619,409	+		HER17_RS11785	0.27	+0.1
2,619,409	+		HER17_RS11785	0.27	-0.7
2,619,409	+		HER17_RS11785	0.27	-0.5
2,619,409	+		HER17_RS11785	0.27	+0.4
2,619,410	-		HER17_RS11785	0.27	-0.8
2,619,410	-		HER17_RS11785	0.27	+1.2
2,619,452	-		HER17_RS11785	0.32	-0.3
2,619,453	+		HER17_RS11785	0.32	+0.4
2,619,454	-		HER17_RS11785	0.32	+0.9
2,619,681	+		HER17_RS11785	0.59	-0.3
2,619,682	-		HER17_RS11785	0.59	+0.4