Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10870

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,426,175	-		HER17_RS10865	0.48	+0.6
2,426,175	-		HER17_RS10865	0.48	-0.4
2,426,300	+		HER17_RS10865	0.56	+0.6
2,426,301	-		HER17_RS10865	0.56	+0.1
2,426,306	+		HER17_RS10865	0.56	+0.3
2,426,331	-		HER17_RS10865	0.58	+1.8
2,426,331	-		HER17_RS10865	0.58	+0.3
2,426,331	-		HER17_RS10865	0.58	-0.1
2,426,331	-		HER17_RS10865	0.58	+0.4
2,426,332	+		HER17_RS10865	0.58	+1.6
2,426,332	+		HER17_RS10865	0.58	+0.1
2,426,332	+		HER17_RS10865	0.58	+0.8
2,426,332	+		HER17_RS10865	0.58	-1.6
2,426,479	-		HER17_RS10865	0.68	-0.6
2,426,712	+		HER17_RS10865	0.83	+0.5
2,426,736	+		HER17_RS10865	0.85	+0.3
2,426,801	+		HER17_RS10865	0.89	+1.4
2,426,910	+				-0.6
2,426,932	-				-0.8
2,427,045	-				-1.2
2,427,073	-				+0.9
2,427,104	+				+0.7
2,427,105	-				-0.2
2,427,224	+		HER17_RS10870	0.12	-0.0
2,427,230	+		HER17_RS10870	0.13	+0.6
2,427,230	+		HER17_RS10870	0.13	-0.9
2,427,230	+		HER17_RS10870	0.13	-0.2
2,427,231	-		HER17_RS10870	0.13	-0.2
2,427,278	+		HER17_RS10870	0.18	-0.7
2,427,342	+		HER17_RS10870	0.25	+0.8
2,427,342	+		HER17_RS10870	0.25	-0.3
2,427,380	+		HER17_RS10870	0.28	-0.1
2,427,381	-		HER17_RS10870	0.29	-0.7
2,427,381	-		HER17_RS10870	0.29	-1.2
2,427,381	-		HER17_RS10870	0.29	-0.2
2,427,421	-		HER17_RS10870	0.33	-0.9
2,427,487	-		HER17_RS10870	0.39	+0.5
2,427,488	+		HER17_RS10870	0.39	+0.3
2,427,489	-		HER17_RS10870	0.40	+1.8
2,427,563	-		HER17_RS10870	0.47	-0.0
2,427,566	-		HER17_RS10870	0.47	+0.8
2,427,742	-		HER17_RS10870	0.66	+1.1
2,427,791	+		HER17_RS10870	0.71	-2.2
2,427,792	-		HER17_RS10870	0.71	-0.1
2,427,816	+		HER17_RS10870	0.73	-0.6
2,427,816	+		HER17_RS10870	0.73	+0.2
2,427,816	+		HER17_RS10870	0.73	+0.1
2,427,817	-		HER17_RS10870	0.73	-0.1
2,427,817	-		HER17_RS10870	0.73	-0.1
2,427,817	-		HER17_RS10870	0.73	+0.9
2,427,817	-		HER17_RS10870	0.73	+0.3
2,427,817	-		HER17_RS10870	0.73	+0.4
2,427,817	-		HER17_RS10870	0.73	-0.2
2,427,998	+				+0.6
2,427,998	+				-0.1
2,427,999	-				+0.2
2,428,021	+				+0.5
2,428,021	+				+0.3
2,428,021	+				+0.1
2,428,022	-				+0.6
2,428,022	-				-0.1
2,428,054	-				+0.7
2,428,055	+				-0.0
2,428,056	-				-0.5
2,428,056	-				+0.2
2,428,078	-				-0.4
2,428,144	+				+0.7
2,428,201	+				-0.7
2,428,222	+				-0.1
2,428,262	+				+0.0
2,428,284	-				+0.8
2,428,408	-				+0.4
2,428,418	+				-0.2
2,428,418	+				-0.0
2,428,418	+				-0.4
2,428,419	-				-1.0
2,428,419	-				-0.5
2,428,425	-				+0.5
2,428,459	-				+0.3
2,428,540	-				-1.7
2,428,540	-				-0.2
2,428,703	-				-2.7