Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,822,887	+				-0.8
1,822,887	+				-0.3
1,822,887	+				-0.1
1,822,887	+				-0.0
1,822,887	+				-0.0
1,822,887	+				-3.4
1,822,887	+				-0.9
1,822,887	+				-0.5
1,822,888	-				+0.0
1,822,888	-				-1.1
1,822,888	-				+0.6
1,822,888	-				-0.8
1,822,888	-				-0.2
1,822,888	-				+0.9
1,822,945	+				-0.4
1,822,946	-				+0.6
1,822,984	+		HER17_RS08275	0.10	-1.1
1,822,984	+		HER17_RS08275	0.10	-0.5
1,822,984	+		HER17_RS08275	0.10	+1.2
1,822,984	+		HER17_RS08275	0.10	+0.3
1,822,985	-		HER17_RS08275	0.11	+0.1
1,822,985	-		HER17_RS08275	0.11	+0.1
1,822,985	-		HER17_RS08275	0.11	+1.1
1,822,988	+		HER17_RS08275	0.11	-1.1
1,822,988	+		HER17_RS08275	0.11	-1.0
1,822,989	-		HER17_RS08275	0.11	+0.9
1,822,989	-		HER17_RS08275	0.11	-0.6
1,823,044	+		HER17_RS08275	0.17	+0.4
1,823,044	+		HER17_RS08275	0.17	-0.2
1,823,044	+		HER17_RS08275	0.17	+0.5
1,823,044	+		HER17_RS08275	0.17	-2.1
1,823,045	-		HER17_RS08275	0.17	-0.1
1,823,045	-		HER17_RS08275	0.17	-0.1
1,823,045	-		HER17_RS08275	0.17	-0.8
1,823,045	-		HER17_RS08275	0.17	-0.6
1,823,396	-		HER17_RS08275	0.52	-0.3
1,823,399	+		HER17_RS08275	0.52	-0.4
1,823,399	+		HER17_RS08275	0.52	-0.5
1,823,399	+		HER17_RS08275	0.52	-1.1
1,823,399	+		HER17_RS08275	0.52	-1.0
1,823,400	-		HER17_RS08275	0.52	-0.1
1,823,404	+		HER17_RS08275	0.53	-1.3
1,823,438	+		HER17_RS08275	0.56	-0.4
1,823,438	+		HER17_RS08275	0.56	-0.2
1,823,438	+		HER17_RS08275	0.56	-1.4
1,823,439	-		HER17_RS08275	0.56	-0.4
1,823,513	-		HER17_RS08275	0.64	-0.0
1,823,587	+		HER17_RS08275	0.71	+0.5
1,823,649	+		HER17_RS08275	0.77	-1.4
1,823,680	-		HER17_RS08275	0.81	+0.2
1,823,764	+		HER17_RS08275	0.89	-1.3
1,823,764	+		HER17_RS08275	0.89	-0.9
1,823,765	-		HER17_RS08275	0.89	-1.5
1,823,774	+				-0.5
1,823,774	+				-0.6
1,823,775	-				+0.3
1,823,775	-				-0.5
1,823,837	+				-0.6
1,823,837	+				+0.4
1,823,873	-				+0.3
1,823,873	-				-0.2
1,823,873	-				-0.7
1,823,880	+				-0.7
1,823,899	+				-0.5
1,823,900	-				+0.3
1,823,941	+				-0.1
1,823,949	+				-0.2
1,823,949	+				+0.1
1,824,024	+				-0.2
1,824,024	+				-0.5
1,824,024	+				-0.6
1,824,025	-				+0.1
1,824,238	-		HER17_RS08280	0.21	-0.3
1,824,238	-		HER17_RS08280	0.21	+0.6
1,824,246	+		HER17_RS08280	0.22	-0.5
1,824,247	-		HER17_RS08280	0.22	+0.8
1,824,247	-		HER17_RS08280	0.22	+1.2
1,824,259	+		HER17_RS08280	0.23	-0.3
1,824,260	-		HER17_RS08280	0.23	+0.9
1,824,260	-		HER17_RS08280	0.23	+0.5
1,824,260	-		HER17_RS08280	0.23	-0.3
1,824,260	-		HER17_RS08280	0.23	-1.7
1,824,265	-		HER17_RS08280	0.23	+0.4
1,824,374	+		HER17_RS08280	0.29	-0.3
1,824,374	+		HER17_RS08280	0.29	+0.6
1,824,374	+		HER17_RS08280	0.29	-2.0
1,824,374	+		HER17_RS08280	0.29	-0.5
1,824,375	-		HER17_RS08280	0.29	+0.2
1,824,375	-		HER17_RS08280	0.29	-0.1
1,824,430	-		HER17_RS08280	0.33	-0.7
1,824,433	+		HER17_RS08280	0.33	+0.4
1,824,434	-		HER17_RS08280	0.33	-0.2
1,824,434	-		HER17_RS08280	0.33	-0.4
1,824,455	+		HER17_RS08280	0.34	-0.2
1,824,455	+		HER17_RS08280	0.34	-0.0
1,824,455	+		HER17_RS08280	0.34	-0.5
1,824,455	+		HER17_RS08280	0.34	+0.6
1,824,455	+		HER17_RS08280	0.34	+0.7
1,824,456	-		HER17_RS08280	0.34	-0.1
1,824,501	+		HER17_RS08280	0.37	+0.4
1,824,501	+		HER17_RS08280	0.37	+0.2
1,824,502	-		HER17_RS08280	0.37	+0.5
1,824,519	+		HER17_RS08280	0.38	-0.6
1,824,520	-		HER17_RS08280	0.38	+0.0
1,824,520	-		HER17_RS08280	0.38	+0.6
1,824,720	+		HER17_RS08280	0.49	-0.4
1,824,721	-		HER17_RS08280	0.49	+0.6
1,824,744	-		HER17_RS08280	0.51	-0.6
1,824,802	+		HER17_RS08280	0.54	-0.0
1,824,802	+		HER17_RS08280	0.54	-1.8
1,824,802	+		HER17_RS08280	0.54	+0.4
1,824,802	+		HER17_RS08280	0.54	+0.5
1,824,803	-		HER17_RS08280	0.54	+0.2
1,824,803	-		HER17_RS08280	0.54	+0.5
1,824,803	-		HER17_RS08280	0.54	+0.2
1,824,803	-		HER17_RS08280	0.54	+0.0
1,824,803	-		HER17_RS08280	0.54	+0.1
1,824,803	-		HER17_RS08280	0.54	+0.5
1,824,834	+		HER17_RS08280	0.56	-0.2
1,824,834	+		HER17_RS08280	0.56	+1.1
1,824,835	-		HER17_RS08280	0.56	+0.7
1,824,835	-		HER17_RS08280	0.56	-0.2
1,824,835	-		HER17_RS08280	0.56	-0.5
1,824,854	+		HER17_RS08280	0.57	+0.3
1,824,854	+		HER17_RS08280	0.57	-1.3
1,824,854	+		HER17_RS08280	0.57	-0.7
1,824,855	-		HER17_RS08280	0.57	-0.4
1,824,855	-		HER17_RS08280	0.57	-0.2
1,824,964	-		HER17_RS08280	0.63	+0.1
1,825,001	+		HER17_RS08280	0.66	-0.7
1,825,001	+		HER17_RS08280	0.66	-0.4
1,825,001	+		HER17_RS08280	0.66	+0.2
1,825,002	-		HER17_RS08280	0.66	-0.7
1,825,002	-		HER17_RS08280	0.66	+0.5
1,825,030	+		HER17_RS08280	0.67	-0.3
1,825,048	+		HER17_RS08280	0.68	+0.9
1,825,113	+		HER17_RS08280	0.72	+0.0
1,825,113	+		HER17_RS08280	0.72	+0.1
1,825,114	-		HER17_RS08280	0.72	+0.3
1,825,157	-		HER17_RS08280	0.75	-0.0
1,825,197	+		HER17_RS08280	0.77	+0.0
1,825,197	+		HER17_RS08280	0.77	-0.4
1,825,197	+		HER17_RS08280	0.77	+0.1
1,825,307	+		HER17_RS08280	0.83	+0.1
1,825,414	+		HER17_RS08280	0.90	+0.7
1,825,414	+		HER17_RS08280	0.90	+0.1
1,825,414	+		HER17_RS08280	0.90	-0.0
1,825,414	+		HER17_RS08280	0.90	+0.5
1,825,415	-		HER17_RS08280	0.90	-0.5
1,825,415	-		HER17_RS08280	0.90	+0.2
1,825,415	-		HER17_RS08280	0.90	+0.1
1,825,415	-		HER17_RS08280	0.90	+0.4
1,825,416	+		HER17_RS08280	0.90	+0.1
1,825,422	+				-0.2
1,825,422	+				+0.3
1,825,422	+				+0.1
1,825,423	-				+0.5
1,825,456	+				-0.2
1,825,540	+				-0.2
1,825,541	-				-0.3
1,825,541	-				-0.0
1,825,554	+				-0.6
1,825,554	+				+0.6
1,825,555	-				-0.8
1,825,593	+				+0.1
1,825,593	+				-0.5
1,825,593	+				+0.9
1,825,594	-				+0.1
1,825,594	-				-0.9
1,825,594	-				-0.5
1,825,598	+				+0.1
1,825,598	+				+0.2
1,825,622	+				+0.4
1,825,624	+				-0.2
1,825,624	+				+1.0
1,825,628	+				+0.7
1,825,628	+				+0.3
1,825,628	+				-1.5
1,825,629	-				+0.3
1,825,629	-				+1.6
1,825,629	-				-0.1
1,825,695	-				+0.1
1,825,708	+				+0.4
1,825,760	+				+0.1
1,825,792	+				-0.4
1,825,792	+				+0.2
1,825,792	+				-0.5
1,825,798	-				-0.6
1,825,819	+				+0.3
1,825,820	-				-0.6
1,825,829	-				+0.3
1,825,829	-				-0.2
1,825,829	-				+0.1
1,825,835	+				+0.6
1,825,835	+				+0.5
1,825,835	+				-0.0
1,825,836	-				+0.8
1,825,836	-				-0.3
1,825,843	-				+0.6
1,825,853	+				-0.1
1,825,853	+				+0.4
1,825,853	+				+0.1
1,825,853	+				+1.0
1,825,854	-				-0.1
1,825,854	-				-0.8
1,825,854	-				-0.0
1,825,854	-				-0.5
1,825,854	-				-1.2
1,825,870	+				+0.1
1,825,870	+				+1.2
1,825,870	+				+0.2
1,825,870	+				-0.1
1,825,870	+				-0.8
1,825,871	-				-0.0
1,825,871	-				-0.4
1,826,012	+		HER17_RS08285	0.50	-0.9
1,826,050	+		HER17_RS08285	0.62	-0.8
1,826,124	-		HER17_RS08285	0.86	-0.6
1,826,149	+				+0.3
1,826,149	+				-2.3
1,826,149	+				+0.3
1,826,156	+				+0.4
1,826,157	-				-1.1
1,826,196	+				-0.5
1,826,226	+				-0.9
1,826,227	-				-0.3
1,826,281	-				-0.7
1,826,281	-				-0.2
1,826,287	+				-0.4
1,826,287	+				-0.2
1,826,371	-				-0.4
1,826,371	-				+0.5
1,826,371	-				+0.7
1,826,377	-				+1.1