Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS04920

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,112,978	-		HER17_RS04915	0.74	+0.5
1,112,978	-		HER17_RS04915	0.74	-0.1
1,112,978	-		HER17_RS04915	0.74	+0.4
1,112,978	-		HER17_RS04915	0.74	+0.4
1,113,022	+		HER17_RS04915	0.77	+0.3
1,113,022	+		HER17_RS04915	0.77	+0.3
1,113,064	+		HER17_RS04915	0.81	-0.4
1,113,064	+		HER17_RS04915	0.81	-1.2
1,113,064	+		HER17_RS04915	0.81	+0.0
1,113,064	+		HER17_RS04915	0.81	+0.1
1,113,065	-		HER17_RS04915	0.81	+0.2
1,113,065	-		HER17_RS04915	0.81	-0.3
1,113,065	-		HER17_RS04915	0.81	-0.2
1,113,125	-		HER17_RS04915	0.85	+0.5
1,113,174	+		HER17_RS04915	0.89	+0.5
1,113,174	+		HER17_RS04915	0.89	+1.1
1,113,174	+		HER17_RS04915	0.89	-0.2
1,113,174	+		HER17_RS04915	0.89	+0.3
1,113,175	-		HER17_RS04915	0.89	+1.4
1,113,185	-		HER17_RS04915	0.89	-0.2
1,113,325	+				-0.3
1,113,326	-				+0.0
1,113,326	-				+0.5
1,113,364	-				+0.5
1,113,384	+				+0.5
1,113,384	+				-0.4
1,113,384	+				-1.1
1,113,385	-				-0.2
1,113,388	+				-1.1
1,113,388	+				-1.0
1,113,389	-				+0.4
1,113,436	+				+0.1
1,113,436	+				-1.4
1,113,436	+				+0.8
1,113,436	+				+0.4
1,113,437	-				+0.1
1,113,437	-				-1.0
1,113,457	-				-0.3
1,113,515	+				+0.3
1,113,515	+				+0.2
1,113,516	-				+0.1
1,113,588	-				-0.2
1,113,591	-				+0.3
1,113,593	+				-0.1
1,113,665	+				+0.8
1,113,688	+				+0.7
1,113,688	+				+0.3
1,113,688	+				+0.4
1,113,688	+				-0.1
1,113,689	-				-1.2
1,113,748	-				-0.6
1,113,902	-				-1.9
1,113,902	-				+0.1
1,113,917	+				-0.1
1,113,917	+				+0.5
1,113,951	-				+1.1
1,114,072	+		HER17_RS04920	0.23	-0.3
1,114,363	-		HER17_RS04920	0.79	+0.4
1,114,363	-		HER17_RS04920	0.79	-1.4
1,114,478	+				-0.6
1,114,478	+				+0.4
1,114,479	-				-1.6
1,114,528	-				-0.3
1,114,583	-				+0.3
1,114,686	-				-0.9
1,114,686	-				-0.6