Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS18195

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,098,436	-				-0.6
4,098,439	-				-0.8
4,098,448	-				-0.2
4,098,448	-				-0.9
4,098,453	-				-0.8
4,098,453	-				+0.2
4,099,137	+		HER17_RS18200	0.23	+0.0
4,099,137	+		HER17_RS18200	0.23	+0.2
4,099,138	-		HER17_RS18200	0.23	+0.3
4,099,138	-		HER17_RS18200	0.23	-0.7
4,099,141	+		HER17_RS18200	0.24	-0.3
4,099,239	-		HER17_RS18200	0.34	-0.6
4,099,252	+		HER17_RS18200	0.36	-0.5
4,099,252	+		HER17_RS18200	0.36	-0.8
4,099,252	+		HER17_RS18200	0.36	-0.9
4,099,265	+		HER17_RS18200	0.37	-0.4
4,099,265	+		HER17_RS18200	0.37	-1.2
4,099,312	-		HER17_RS18200	0.42	+1.1
4,099,325	+		HER17_RS18200	0.43	-1.6
4,099,325	+		HER17_RS18200	0.43	-0.2
4,099,325	+		HER17_RS18200	0.43	-1.0
4,099,325	+		HER17_RS18200	0.43	-0.8
4,099,325	+		HER17_RS18200	0.43	-0.4
4,099,326	-		HER17_RS18200	0.43	-1.0
4,099,326	-		HER17_RS18200	0.43	+0.2
4,099,326	-		HER17_RS18200	0.43	-0.0
4,099,326	-		HER17_RS18200	0.43	-0.0
4,099,326	-		HER17_RS18200	0.43	-1.4
4,099,446	-		HER17_RS18200	0.56	-0.1
4,099,446	-		HER17_RS18200	0.56	+0.2
4,099,446	-		HER17_RS18200	0.56	-0.3
4,099,446	-		HER17_RS18200	0.56	+0.6
4,099,451	+		HER17_RS18200	0.57	+0.9
4,099,451	+		HER17_RS18200	0.57	-0.9
4,099,451	+		HER17_RS18200	0.57	-0.7
4,099,452	-		HER17_RS18200	0.57	+1.1
4,099,452	-		HER17_RS18200	0.57	-1.4
4,099,458	+		HER17_RS18200	0.57	+0.5
4,099,459	-		HER17_RS18200	0.57	-0.9
4,099,459	-		HER17_RS18200	0.57	+0.0
4,099,470	-		HER17_RS18200	0.59	-0.3
4,099,626	+		HER17_RS18200	0.75	-0.6
4,099,659	-		HER17_RS18200	0.79	+0.1
4,099,711	+		HER17_RS18200	0.84	+0.5
4,099,765	+		HER17_RS18200	0.90	-0.1
4,099,766	-				-0.6
4,099,785	+				-0.0
4,099,785	+				+0.0
4,099,786	-				-0.3