Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS18170

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,090,987	-				-0.8
4,090,987	-				-1.4
4,091,006	-		HER17_RS18165	0.11	+0.4
4,091,006	-		HER17_RS18165	0.11	+0.4
4,091,124	-		HER17_RS18165	0.24	+1.4
4,091,124	-		HER17_RS18165	0.24	-1.0
4,091,124	-		HER17_RS18165	0.24	+0.4
4,091,151	-		HER17_RS18165	0.28	-0.2
4,091,158	+		HER17_RS18165	0.28	+0.1
4,091,158	+		HER17_RS18165	0.28	-1.0
4,091,159	-		HER17_RS18165	0.28	-0.5
4,091,208	+		HER17_RS18165	0.34	+0.3
4,091,208	+		HER17_RS18165	0.34	+0.0
4,091,208	+		HER17_RS18165	0.34	-0.1
4,091,263	+		HER17_RS18165	0.40	+0.2
4,091,264	-		HER17_RS18165	0.40	+0.4
4,091,273	-		HER17_RS18165	0.41	-1.0
4,091,273	-		HER17_RS18165	0.41	+0.1
4,091,292	+		HER17_RS18165	0.44	+0.4
4,091,293	-		HER17_RS18165	0.44	+1.1
4,091,423	+		HER17_RS18165	0.58	+0.3
4,091,424	-		HER17_RS18165	0.59	-0.5
4,091,435	-		HER17_RS18165	0.60	-0.4
4,091,435	-		HER17_RS18165	0.60	+0.5
4,091,585	-		HER17_RS18165	0.77	-0.1
4,091,590	+		HER17_RS18165	0.77	+0.2
4,091,590	+		HER17_RS18165	0.77	+0.1
4,091,591	-		HER17_RS18165	0.78	+0.0
4,091,718	-				-0.8
4,091,843	-				-0.7
4,091,843	-				-0.5
4,091,843	-				+1.9
4,091,848	+				-0.4
4,091,849	-				-0.8
4,091,867	+				-1.1
4,091,867	+				-1.1
4,091,867	+				+0.4
4,091,867	+				+0.2
4,091,868	-				+0.7
4,091,948	+				-0.1
4,091,948	+				+0.9
4,091,948	+				+1.1
4,091,949	-				-0.1
4,091,949	-				-0.2
4,091,949	-				-0.3
4,091,949	-				-0.3
4,091,949	-				+0.3
4,091,951	+				+0.1
4,091,951	+				+1.6
4,091,951	+				-0.9
4,091,951	+				-0.6
4,091,951	+				+0.2
4,091,952	-				+0.3
4,091,952	-				-0.2
4,091,952	-				+0.2
4,091,952	-				+1.2
4,091,952	-				+0.0
4,092,002	+				-2.2
4,092,168	-		HER17_RS18170	0.21	+0.3
4,092,205	+		HER17_RS18170	0.25	-0.0
4,092,205	+		HER17_RS18170	0.25	+0.0
4,092,205	+		HER17_RS18170	0.25	+0.9
4,092,245	+		HER17_RS18170	0.29	-0.1
4,092,286	+		HER17_RS18170	0.33	-0.3
4,092,390	+		HER17_RS18170	0.43	+0.9
4,092,391	-		HER17_RS18170	0.44	-0.5
4,092,480	+		HER17_RS18170	0.52	-0.5
4,092,545	+		HER17_RS18170	0.59	+0.6
4,092,545	+		HER17_RS18170	0.59	-0.2
4,092,612	+		HER17_RS18170	0.65	-0.1
4,092,612	+		HER17_RS18170	0.65	-0.1
4,092,944	-				+0.4
4,092,944	-				-0.2
4,092,957	+				-0.2
4,092,958	-				-0.1
4,092,958	-				-0.0
4,092,960	+				-0.1
4,092,960	+				-0.1
4,092,961	-				-0.6
4,093,018	-				-0.4
4,093,026	-				+0.8
4,093,044	-				-0.5
4,093,048	+				-0.6
4,093,049	-				+1.0
4,093,049	-				+0.0
4,093,380	-		HER17_RS18175	0.17	+0.2
4,093,381	+		HER17_RS18175	0.18	-0.3
4,093,464	-		HER17_RS18175	0.22	-2.5
4,093,468	+		HER17_RS18175	0.22	-0.9
4,093,469	-		HER17_RS18175	0.22	-0.9