Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS18100

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,074,692	+		HER17_RS18090	0.86	+0.4
4,074,692	+		HER17_RS18090	0.86	-0.2
4,074,693	-		HER17_RS18090	0.87	+0.1
4,074,696	-		HER17_RS18090	0.87	+0.5
4,074,724	+				-1.1
4,074,725	-				-0.4
4,074,758	+				-1.9
4,074,759	-				-0.8
4,074,759	-				-0.3
4,074,801	-				-0.1
4,074,801	-				-1.1
4,074,838	-				-0.2
4,074,932	+				+0.1
4,074,932	+				+1.0
4,074,932	+				+0.1
4,074,933	-				-0.4
4,074,933	-				+0.5
4,074,933	-				+0.8
4,074,950	+				+1.3
4,074,951	-				+0.8
4,074,960	-				-0.7
4,074,962	+				-0.2
4,074,972	+				-0.7
4,074,984	-				+0.5
4,075,003	+				-0.8
4,075,004	-				+0.4
4,075,027	+		HER17_RS18095	0.13	+0.5
4,075,056	+		HER17_RS18095	0.19	+0.4
4,075,057	-		HER17_RS18095	0.20	+0.2
4,075,105	+		HER17_RS18095	0.30	+0.3
4,075,106	-		HER17_RS18095	0.30	-0.0
4,075,106	-		HER17_RS18095	0.30	-0.0
4,075,352	+		HER17_RS18095	0.81	-0.6
4,075,353	-		HER17_RS18095	0.81	+0.5
4,075,440	+				-0.9
4,075,440	+				-0.1
4,075,441	-				+0.7
4,075,441	-				+0.6
4,075,465	+				-1.6
4,075,465	+				-0.7
4,075,630	+				-0.3
4,075,631	-				-0.0
4,075,631	-				+0.4
4,075,631	-				+0.2
4,075,634	-				-0.6
4,075,634	-				-0.3
4,075,696	-				+0.3
4,075,702	-				-0.9
4,075,702	-				+0.6
4,075,702	-				+0.6
4,075,726	+				-0.1
4,075,726	+				+0.3
4,075,727	-				+0.0
4,075,757	+		HER17_RS18100	0.14	+0.4
4,075,812	-		HER17_RS18100	0.24	+0.8
4,075,830	-		HER17_RS18100	0.27	+0.7
4,075,870	+		HER17_RS18100	0.35	-0.2
4,075,870	+		HER17_RS18100	0.35	+0.5
4,075,870	+		HER17_RS18100	0.35	-0.5
4,075,870	+		HER17_RS18100	0.35	-0.2
4,075,871	-		HER17_RS18100	0.35	-0.3
4,075,871	-		HER17_RS18100	0.35	-0.3
4,075,871	-		HER17_RS18100	0.35	-0.2
4,075,880	+		HER17_RS18100	0.37	+0.6
4,075,880	+		HER17_RS18100	0.37	+0.4
4,075,881	-		HER17_RS18100	0.37	+0.6
4,075,893	+		HER17_RS18100	0.39	-0.7
4,075,893	+		HER17_RS18100	0.39	+0.2
4,075,893	+		HER17_RS18100	0.39	-0.3
4,075,893	+		HER17_RS18100	0.39	+0.4
4,075,893	+		HER17_RS18100	0.39	+0.7
4,075,894	-		HER17_RS18100	0.39	-0.3
4,075,894	-		HER17_RS18100	0.39	-0.1
4,075,894	-		HER17_RS18100	0.39	+1.2
4,076,015	-		HER17_RS18100	0.62	-0.3
4,076,015	-		HER17_RS18100	0.62	+0.3
4,076,091	-		HER17_RS18100	0.76	+0.4
4,076,091	-		HER17_RS18100	0.76	+0.2
4,076,146	+		HER17_RS18100	0.86	-1.5
4,076,146	+		HER17_RS18100	0.86	+0.0
4,076,180	+				+0.7
4,076,181	-				+0.8
4,076,181	-				+0.4
4,076,181	-				+0.4
4,076,181	-				-0.3
4,076,192	+				-0.1
4,076,192	+				+0.3
4,076,192	+				-0.9
4,076,193	-				-0.5
4,076,193	-				-0.6
4,076,193	-				+0.6
4,076,193	-				+0.4
4,076,193	-				+0.7
4,076,225	+				+1.5
4,076,225	+				+0.5
4,076,226	-				-1.3
4,076,226	-				-0.4
4,076,226	-				+0.2
4,076,266	-				+0.4
4,076,304	+				+0.0
4,076,304	+				-0.1
4,076,304	+				-0.4
4,076,362	-		HER17_RS18105	0.15	+0.3
4,076,432	-		HER17_RS18105	0.22	-0.4
4,076,536	+		HER17_RS18105	0.33	+0.4
4,076,623	+		HER17_RS18105	0.42	+0.2
4,076,624	-		HER17_RS18105	0.42	-0.2
4,076,700	-		HER17_RS18105	0.50	-0.1
4,076,823	+		HER17_RS18105	0.63	-0.1
4,076,824	-		HER17_RS18105	0.63	-0.1
4,076,853	+		HER17_RS18105	0.66	-0.0
4,076,853	+		HER17_RS18105	0.66	-0.2
4,076,854	-		HER17_RS18105	0.66	-0.7
4,076,854	-		HER17_RS18105	0.66	+1.1
4,076,968	+		HER17_RS18105	0.78	+0.4
4,076,968	+		HER17_RS18105	0.78	-0.0
4,077,010	+		HER17_RS18105	0.82	-0.8
4,077,011	-		HER17_RS18105	0.82	-0.6
4,077,183	+				-1.6
4,077,198	+				+0.2
4,077,202	+				+0.0