Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17910

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,038,556	+		HER17_RS17900	0.78	+0.6
4,038,557	-		HER17_RS17900	0.78	-0.3
4,038,641	-				-0.1
4,038,688	+				+0.6
4,038,689	-				+0.3
4,038,689	-				+0.0
4,038,689	-				+0.8
4,038,724	+				-0.7
4,038,725	-				-0.1
4,038,725	-				-0.7
4,038,769	+				+0.1
4,038,770	-				-0.8
4,038,785	+				+0.4
4,038,785	+				-0.1
4,038,785	+				+0.6
4,038,785	+				-0.6
4,038,786	-				+0.5
4,038,793	+				-0.2
4,038,793	+				-0.4
4,038,793	+				+0.4
4,038,825	+				+0.2
4,038,839	-				+0.3
4,038,839	-				+0.5
4,039,018	+				+0.6
4,039,019	-				-0.3
4,039,070	+		HER17_RS17905	0.17	-0.5
4,039,107	+		HER17_RS17905	0.24	+0.2
4,039,107	+		HER17_RS17905	0.24	+0.6
4,039,107	+		HER17_RS17905	0.24	+0.6
4,039,108	-		HER17_RS17905	0.24	-0.2
4,039,117	+		HER17_RS17905	0.26	+0.5
4,039,118	-		HER17_RS17905	0.26	+0.4
4,039,196	+		HER17_RS17905	0.41	-0.1
4,039,205	+		HER17_RS17905	0.43	+0.6
4,039,206	-		HER17_RS17905	0.43	-0.4
4,039,219	-		HER17_RS17905	0.46	-0.8
4,039,219	-		HER17_RS17905	0.46	+0.7
4,039,219	-		HER17_RS17905	0.46	+0.5
4,039,219	-		HER17_RS17905	0.46	-0.4
4,039,234	+		HER17_RS17905	0.49	-0.5
4,039,235	-		HER17_RS17905	0.49	+0.4
4,039,326	+		HER17_RS17905	0.66	-0.1
4,039,326	+		HER17_RS17905	0.66	-0.6
4,039,343	+		HER17_RS17905	0.70	+0.8
4,039,493	+				-0.1
4,039,498	+				+0.3
4,039,498	+				+0.5
4,039,499	-				-0.2
4,039,499	-				+0.2
4,039,502	+				+0.0
4,039,502	+				+0.4
4,039,502	+				+0.2
4,039,502	+				+0.2
4,039,502	+				+0.4
4,039,503	-				+0.0
4,039,503	-				+0.3
4,039,503	-				-0.3
4,039,506	-				-0.4
4,039,506	-				+0.9
4,039,521	+				-0.3
4,039,522	-				+0.3
4,039,522	-				-0.3
4,039,522	-				+0.5
4,039,539	+				-0.3
4,039,540	-				-0.8
4,039,545	+				-0.3
4,039,546	-				-0.0
4,039,598	+		HER17_RS17910	0.21	+0.5
4,039,629	+		HER17_RS17910	0.31	+0.7
4,039,630	-		HER17_RS17910	0.31	+0.4
4,039,637	+		HER17_RS17910	0.33	-0.2
4,039,637	+		HER17_RS17910	0.33	+0.9
4,039,637	+		HER17_RS17910	0.33	+0.0
4,039,638	-		HER17_RS17910	0.34	+0.5
4,039,638	-		HER17_RS17910	0.34	+0.2
4,039,638	-		HER17_RS17910	0.34	+0.1
4,039,640	+		HER17_RS17910	0.34	-0.7
4,039,640	+		HER17_RS17910	0.34	+0.6
4,039,640	+		HER17_RS17910	0.34	-0.3
4,039,640	+		HER17_RS17910	0.34	-2.6
4,039,641	-		HER17_RS17910	0.35	+0.2
4,039,641	-		HER17_RS17910	0.35	-0.0
4,039,641	-		HER17_RS17910	0.35	-0.2
4,039,641	-		HER17_RS17910	0.35	-0.1
4,039,641	-		HER17_RS17910	0.35	-0.2
4,039,718	-		HER17_RS17910	0.58	-0.5
4,039,760	+		HER17_RS17910	0.71	+0.6
4,039,761	-		HER17_RS17910	0.72	+0.4
4,039,850	+				+0.5
4,039,851	-				+0.0
4,040,004	+				+1.6
4,040,004	+				+0.6
4,040,005	-				-0.1
4,040,008	+				-0.2
4,040,008	+				+0.2
4,040,009	-				+0.2
4,040,052	-		HER17_RS17915	0.14	-1.1
4,040,073	+		HER17_RS17915	0.17	+0.1
4,040,073	+		HER17_RS17915	0.17	+0.5
4,040,074	-		HER17_RS17915	0.17	-0.2
4,040,145	+		HER17_RS17915	0.24	-0.2
4,040,290	-		HER17_RS17915	0.40	+0.0
4,040,319	+		HER17_RS17915	0.43	-0.0
4,040,325	+		HER17_RS17915	0.43	-0.6
4,040,325	+		HER17_RS17915	0.43	+0.6
4,040,339	-		HER17_RS17915	0.45	-0.4
4,040,490	-		HER17_RS17915	0.61	+0.2
4,040,588	+		HER17_RS17915	0.72	-0.9
4,040,588	+		HER17_RS17915	0.72	+0.4
4,040,588	+		HER17_RS17915	0.72	+0.2
4,040,589	-		HER17_RS17915	0.72	+0.2
4,040,589	-		HER17_RS17915	0.72	+0.2
4,040,589	-		HER17_RS17915	0.72	-0.1
4,040,589	-		HER17_RS17915	0.72	-0.6
4,040,589	-		HER17_RS17915	0.72	+0.2
4,040,730	-		HER17_RS17915	0.87	-0.3
4,040,766	-				-0.3
4,040,792	+				-0.1
4,040,848	-				-0.0