Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS16655

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,756,430	+				-0.1
3,756,435	-				+0.2
3,756,435	-				-0.2
3,756,435	-				-0.7
3,756,438	-				-0.2
3,756,545	+				+0.6
3,756,545	+				+0.1
3,756,545	+				+0.3
3,756,545	+				+0.0
3,756,546	-				-0.0
3,756,547	+				-0.9
3,756,547	+				-1.1
3,756,547	+				-0.3
3,756,548	-				+0.1
3,756,594	+				+0.3
3,756,594	+				+0.5
3,756,594	+				-0.1
3,756,594	+				-0.0
3,756,594	+				-0.1
3,756,595	-				+0.6
3,756,595	-				+0.5
3,756,595	-				+0.5
3,756,598	-				+0.1
3,756,633	+				+0.1
3,756,634	-				-0.4
3,756,634	-				+0.3
3,756,648	-				+0.4
3,756,727	+		HER17_RS16650	0.19	+0.1
3,756,727	+		HER17_RS16650	0.19	-2.1
3,756,727	+		HER17_RS16650	0.19	+0.3
3,756,728	-		HER17_RS16650	0.20	-0.7
3,756,728	-		HER17_RS16650	0.20	+0.8
3,756,728	-		HER17_RS16650	0.20	-0.3
3,756,801	+		HER17_RS16650	0.28	-0.4
3,756,801	+		HER17_RS16650	0.28	+0.1
3,756,801	+		HER17_RS16650	0.28	+0.1
3,756,801	+		HER17_RS16650	0.28	-0.4
3,756,802	-		HER17_RS16650	0.28	+0.6
3,756,802	-		HER17_RS16650	0.28	+0.2
3,756,823	-		HER17_RS16650	0.31	+0.1
3,756,858	+		HER17_RS16650	0.35	-0.3
3,756,858	+		HER17_RS16650	0.35	+0.5
3,756,858	+		HER17_RS16650	0.35	-0.4
3,756,858	+		HER17_RS16650	0.35	-0.4
3,756,858	+		HER17_RS16650	0.35	-0.1
3,756,859	-		HER17_RS16650	0.35	+0.7
3,756,911	+		HER17_RS16650	0.41	+0.6
3,756,911	+		HER17_RS16650	0.41	+0.5
3,756,912	-		HER17_RS16650	0.42	-0.2
3,757,412	+				+0.8
3,757,412	+				-0.4
3,757,413	-				-0.4
3,757,413	-				+0.5
3,757,456	+				-0.3
3,757,468	-				+0.3
3,757,470	+				+0.2
3,757,471	-				-0.8
3,757,488	+				+0.5
3,757,489	-				+0.7
3,757,684	+		HER17_RS16655	0.22	-0.4
3,757,684	+		HER17_RS16655	0.22	-0.4
3,757,684	+		HER17_RS16655	0.22	-1.3
3,757,684	+		HER17_RS16655	0.22	+0.3
3,757,684	+		HER17_RS16655	0.22	-0.7
3,757,684	+		HER17_RS16655	0.22	+0.0
3,757,685	-		HER17_RS16655	0.22	+0.3
3,757,685	-		HER17_RS16655	0.22	-0.2
3,757,685	-		HER17_RS16655	0.22	+0.2
3,757,685	-		HER17_RS16655	0.22	+0.1
3,757,685	-		HER17_RS16655	0.22	-0.3
3,757,724	+		HER17_RS16655	0.26	-1.4
3,757,725	-		HER17_RS16655	0.26	+0.7
3,757,743	-		HER17_RS16655	0.27	+0.3
3,757,808	+		HER17_RS16655	0.32	+0.7
3,757,809	-		HER17_RS16655	0.33	-0.4
3,757,809	-		HER17_RS16655	0.33	+0.7
3,757,809	-		HER17_RS16655	0.33	-0.5
3,757,876	+		HER17_RS16655	0.38	+0.6
3,757,877	-		HER17_RS16655	0.38	-0.1
3,758,070	+		HER17_RS16655	0.54	+0.1
3,758,091	+		HER17_RS16655	0.56	+0.2
3,758,091	+		HER17_RS16655	0.56	-0.3
3,758,183	+		HER17_RS16655	0.63	-0.7
3,758,184	-		HER17_RS16655	0.63	+0.2
3,758,184	-		HER17_RS16655	0.63	+0.0
3,758,184	-		HER17_RS16655	0.63	-0.1
3,758,184	-		HER17_RS16655	0.63	+0.9
3,758,214	-		HER17_RS16655	0.66	-0.0
3,758,262	+		HER17_RS16655	0.70	+1.6
3,758,262	+		HER17_RS16655	0.70	+0.2
3,758,263	-		HER17_RS16655	0.70	+0.4
3,758,293	-		HER17_RS16655	0.72	-1.5
3,758,293	-		HER17_RS16655	0.72	+1.3
3,758,358	+		HER17_RS16655	0.77	+1.6
3,758,491	-		HER17_RS16655	0.88	-1.7
3,758,567	+				+0.3
3,758,587	-				+0.6
3,758,589	+				-0.4
3,758,590	-				+0.2
3,758,609	+				+0.1
3,758,609	+				-2.6
3,758,609	+				+0.3
3,758,610	-				+0.7
3,758,679	+				+0.5
3,758,800	+				-2.0
3,758,800	+				-0.0
3,758,800	+				+0.4
3,758,801	-				+0.1
3,758,801	-				+0.2
3,758,809	-				-0.2
3,758,820	-				-0.4
3,758,820	-				-0.2
3,758,860	+				-0.1
3,758,861	-				-0.5
3,758,861	-				+0.3
3,758,920	+				+0.4
3,758,920	+				+0.4
3,758,921	-				-0.3
3,758,921	-				-1.2
3,758,921	-				+0.2
3,758,975	+				+1.2
3,758,998	-		HER17_RS16660	0.12	-0.4
3,758,998	-		HER17_RS16660	0.12	-0.5
3,758,998	-		HER17_RS16660	0.12	+0.6
3,758,998	-		HER17_RS16660	0.12	+0.2
3,759,014	+		HER17_RS16660	0.14	-0.4
3,759,014	+		HER17_RS16660	0.14	+0.8
3,759,070	+		HER17_RS16660	0.23	+1.0
3,759,071	-		HER17_RS16660	0.23	-0.6
3,759,076	+		HER17_RS16660	0.24	-0.6
3,759,077	-		HER17_RS16660	0.24	-1.8
3,759,242	+		HER17_RS16660	0.51	+0.1
3,759,243	-		HER17_RS16660	0.51	-1.0
3,759,243	-		HER17_RS16660	0.51	-0.3
3,759,291	+		HER17_RS16660	0.58	+0.4
3,759,292	-		HER17_RS16660	0.59	-0.1
3,759,292	-		HER17_RS16660	0.59	+0.1
3,759,391	+		HER17_RS16660	0.74	+0.1
3,759,391	+		HER17_RS16660	0.74	+0.2
3,759,391	+		HER17_RS16660	0.74	-0.4
3,759,391	+		HER17_RS16660	0.74	+0.1
3,759,391	+		HER17_RS16660	0.74	+0.8
3,759,392	-		HER17_RS16660	0.74	+0.3
3,759,392	-		HER17_RS16660	0.74	+0.1
3,759,392	-		HER17_RS16660	0.74	-0.3
3,759,405	+		HER17_RS16660	0.77	+1.2
3,759,405	+		HER17_RS16660	0.77	+1.0
3,759,405	+		HER17_RS16660	0.77	+0.1
3,759,406	-		HER17_RS16660	0.77	+0.5
3,759,406	-		HER17_RS16660	0.77	-0.2
3,759,406	-		HER17_RS16660	0.77	+0.5
3,759,409	+		HER17_RS16660	0.77	+0.3
3,759,410	-		HER17_RS16660	0.77	+2.5
3,759,410	-		HER17_RS16660	0.77	-0.1
3,759,410	-		HER17_RS16660	0.77	+0.6
3,759,441	+		HER17_RS16660	0.82	+0.1
3,759,563	+				-0.2
3,759,563	+				-0.4
3,759,563	+				-0.1
3,759,564	-				+0.3
3,759,564	-				+1.0
3,759,628	+				+0.4
3,759,628	+				+0.1
3,759,628	+				+1.0
3,759,628	+				+0.4
3,759,628	+				-0.4
3,759,628	+				-0.2
3,759,628	+				+0.2
3,759,628	+				+0.2
3,759,628	+				+0.5
3,759,628	+				-0.2
3,759,628	+				+0.4
3,759,628	+				-0.8
3,759,628	+				+0.4
3,759,629	-				+0.3
3,759,629	-				-0.9
3,759,629	-				+0.2
3,759,629	-				+0.2
3,759,629	-				+0.3
3,759,629	-				+0.7
3,759,629	-				-0.1
3,759,629	-				-0.0
3,759,629	-				+0.5
3,759,629	-				+0.5
3,759,629	-				+0.0
3,759,630	-				-0.6