Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,427,033	+				-0.3
3,427,044	-				+0.2
3,427,048	-				-1.5
3,427,052	-				-0.5
3,427,157	-		HER17_RS15280	0.20	-0.2
3,427,207	+		HER17_RS15280	0.45	-0.2
3,427,271	+		HER17_RS15280	0.77	+1.0
3,427,272	-		HER17_RS15280	0.78	-0.3
3,427,272	-		HER17_RS15280	0.78	+0.5
3,427,301	-				-2.2
3,427,306	+				-0.8
3,427,323	+				-0.1
3,427,323	+				+0.6
3,427,324	-				+0.1
3,427,324	-				-0.3
3,427,332	+				+0.2
3,427,333	-				+0.3
3,427,333	-				-0.2
3,427,363	+				+0.1
3,427,363	+				-0.7
3,427,363	+				-0.8
3,427,364	-				-0.5
3,427,364	-				-0.3
3,427,411	-				+0.3
3,427,411	-				+0.1
3,427,670	+				-2.2
3,427,670	+				-0.5
3,427,670	+				-0.3
3,427,670	+				-1.3
3,427,670	+				+0.1
3,427,670	+				-0.2
3,427,670	+				+0.3
3,427,672	+				+0.4
3,427,672	+				-2.0
3,427,672	+				+0.3
3,427,672	+				+0.5
3,427,672	+				+0.1
3,427,676	+				+0.1
3,427,677	-				+0.4
3,427,677	-				-0.6
3,427,677	-				+0.3
3,427,677	-				+0.5
3,427,677	-				+0.3
3,427,711	+				+0.4
3,427,711	+				+0.4
3,427,719	+				-0.5
3,427,719	+				+0.4
3,427,720	-				+0.4
3,427,762	-				+0.1
3,427,784	+				-0.2
3,427,785	-				+0.0
3,427,819	-				-0.1
3,427,822	-				-0.6
3,427,888	-				+1.0
3,427,914	+				+0.2
3,427,914	+				-0.5
3,427,914	+				+0.1
3,427,979	+				+0.6
3,427,979	+				+0.5
3,427,980	-				+0.3
3,427,980	-				+0.7
3,427,984	-				+0.6
3,428,007	+				-0.3
3,428,007	+				-0.1
3,428,013	+				-0.2
3,428,013	+				+0.4
3,428,013	+				+0.0
3,428,014	-				+0.0
3,428,014	-				+0.1
3,428,014	-				+0.5
3,428,016	+				+0.5
3,428,017	-				+0.6
3,428,017	-				+0.0
3,428,017	-				-0.4
3,428,017	-				-0.3
3,428,021	+				+0.8
3,428,030	+				+0.3
3,428,031	-				+0.3
3,428,031	-				+0.2
3,428,034	+				+0.1
3,428,035	-				+0.2
3,428,035	-				+0.0
3,428,035	-				+1.5
3,428,214	+		HER17_RS15285	0.54	+0.2
3,428,279	+		HER17_RS15285	0.71	+0.2
3,428,279	+		HER17_RS15285	0.71	-0.1